RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 SMCHD1A6NHR9 2005 aa9.85□□□□□ -0.83
LRRC28-215ENST00000559774 NFASCO94856 1347 aa9.85□□□□□ -0.83
LRRC28-215ENST00000559774 CCNT1O60563 726 aaKnown RBP9.85□□□□□ -0.83
LRRC28-215ENST00000559774 DUSP11O75319 330 aaKnown RBP9.85□□□□□ -0.83
LRRC28-215ENST00000559774 BAG4O95429 457 aaKnown RBP9.85□□□□□ -0.83
LRRC28-215ENST00000559774 PRKAR2AP13861 404 aaKnown RBP9.85□□□□□ -0.83
LRRC28-215ENST00000559774 TOB1P50616 345 aaPredicted RBP9.85□□□□□ -0.83
LRRC28-215ENST00000559774 CCDC144BQ3MJ40 725 aa9.85□□□□□ -0.83
LRRC28-215ENST00000559774 TTC38Q5R3I4 469 aa9.85□□□□□ -0.83
LRRC28-215ENST00000559774 PLA2G4DQ86XP0 818 aa9.85□□□□□ -0.83
LRRC28-215ENST00000559774 EMID1Q96A84 441 aaPredicted RBP9.85□□□□□ -0.83
LRRC28-215ENST00000559774 LENG9Q96B70 501 aa9.85□□□□□ -0.83
LRRC28-215ENST00000559774 WDR11Q9BZH6 1224 aa9.85□□□□□ -0.83
LRRC28-215ENST00000559774 KCNMB3Q9NPA1 279 aa9.85□□□□□ -0.83
LRRC28-215ENST00000559774 RTEL1Q9NZ71 1219 aa9.85□□□□□ -0.83
LRRC28-215ENST00000559774 DDX25Q9UHL0 483 aaKnown RBP9.85□□□□□ -0.83
LRRC28-215ENST00000559774 DDX41Q9UJV9 622 aaKnown RBP9.85□□□□□ -0.83
LRRC28-215ENST00000559774 CFAP45Q9UL16 551 aa9.85□□□□□ -0.83
LRRC28-215ENST00000559774 MRVI1Q9Y6F6 885 aa9.85□□□□□ -0.83
LRRC28-215ENST00000559774 IPO5O00410 1097 aaKnown RBP9.84□□□□□ -0.83
LRRC28-215ENST00000559774 NEMFO60524 1076 aa9.84□□□□□ -0.83
LRRC28-215ENST00000559774 TXNP10599 105 aaKnown RBP9.84□□□□□ -0.83
LRRC28-215ENST00000559774 PRPHP41219 470 aa9.84□□□□□ -0.83
LRRC28-215ENST00000559774 TNFAIP2Q03169 654 aa9.84□□□□□ -0.83
LRRC28-215ENST00000559774 LAMC2Q13753 1193 aa9.84□□□□□ -0.83
LRRC28-215ENST00000559774 PRR16Q569H4 304 aa9.84□□□□□ -0.83
LRRC28-215ENST00000559774 ARL6IP4Q66PJ3 421 aaKnown RBP9.84□□□□□ -0.83
LRRC28-215ENST00000559774 SEPT14Q6ZU15 432 aa9.84□□□□□ -0.83
LRRC28-215ENST00000559774 FERMT3Q86UX7 667 aa9.84□□□□□ -0.83
LRRC28-215ENST00000559774 FBXO16Q8IX29 292 aaPredicted RBP9.84□□□□□ -0.83
LRRC28-215ENST00000559774 SLC5A5Q92911 643 aa9.84□□□□□ -0.83
LRRC28-215ENST00000559774 ZNF333Q96JL9 665 aa9.84□□□□□ -0.83
LRRC28-215ENST00000559774 ZNF577Q9BSK1 485 aa9.84□□□□□ -0.83
LRRC28-215ENST00000559774 AGO4Q9HCK5 861 aaKnown RBP9.84□□□□□ -0.83
LRRC28-215ENST00000559774 PAK6Q9NQU5 681 aaPredicted RBP9.84□□□□□ -0.83
LRRC28-215ENST00000559774 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.84□□□□□ -0.83
LRRC28-215ENST00000559774 POLR3EQ9NVU0 708 aa9.84□□□□□ -0.83
LRRC28-215ENST00000559774 ZHX1Q9UKY1 873 aaPredicted RBP9.84□□□□□ -0.83
LRRC28-215ENST00000559774 GNEQ9Y223 722 aaKnown RBP9.84□□□□□ -0.83
LRRC28-215ENST00000559774 ZDHHC9Q9Y397 364 aa9.84□□□□□ -0.83
LRRC28-215ENST00000559774 FAM205CA6NFA0 338 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 MSH4O15457 936 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 TDP2O95551 362 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 GH1P01241 217 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 RARBP10826 455 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 KCNA2P16389 499 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 MCM7P33993 719 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 NASPP49321 788 aaPredicted RBP9.83□□□□□ -0.84
LRRC28-215ENST00000559774 ATP2C1P98194 919 aaPredicted RBP9.83□□□□□ -0.84
LRRC28-215ENST00000559774 C1QBPQ07021 282 aaKnown RBP9.83□□□□□ -0.84
LRRC28-215ENST00000559774 SEMA3FQ13275 785 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 PKP1Q13835 747 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 CALCRLQ16602 461 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 BRDTQ58F21 947 aaPredicted RBP9.83□□□□□ -0.84
LRRC28-215ENST00000559774 CELF3Q5SZQ8 465 aaKnown RBP9.83□□□□□ -0.84
LRRC28-215ENST00000559774 METTL7BQ6UX53 244 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 EEPD1Q7L9B9 569 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 TRPV1Q8NER1 839 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 RDM1Q8NG50 284 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 CYP2W1Q8TAV3 490 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 ETNPPLQ8TBG4 499 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 MTMR9Q96QG7 549 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 SDF4Q9BRK5 362 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 MCOLN1Q9GZU1 580 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 SPC25Q9HBM1 224 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 PDGFCQ9NRA1 345 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 DDX20Q9UHI6 824 aaKnown RBP9.83□□□□□ -0.84
LRRC28-215ENST00000559774 TCEAL9Q9UHQ7 104 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 STK24Q9Y6E0 443 aa9.83□□□□□ -0.84
LRRC28-215ENST00000559774 HTTP42858 3142 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 ZNFX1Q9P2E3 1918 aaKnown RBP9.82□□□□□ -0.84
LRRC28-215ENST00000559774 DHX15O43143 795 aaKnown RBP9.82□□□□□ -0.84
LRRC28-215ENST00000559774 SLC37A4O43826 429 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 KPNA6O60684 536 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 PPFIA4O75335 1185 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 PSMD10O75832 226 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 YEATS4O95619 227 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 GJB1P08034 283 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 OR52Z1P0C646 297 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 ARP10275 920 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 HOXD8P13378 290 aaPredicted RBP9.82□□□□□ -0.84
LRRC28-215ENST00000559774 SMPD1P17405 629 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 UBA1P22314 1058 aaKnown RBP9.82□□□□□ -0.84
LRRC28-215ENST00000559774 CST5P28325 142 aaPredicted RBP9.82□□□□□ -0.84
LRRC28-215ENST00000559774 CNGA1P29973 690 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 SFNP31947 248 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 ADCYAP1R1P41586 468 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 CPT1AP50416 773 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 GJA9P57773 515 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 KRT85P78386 507 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 KRT76Q01546 638 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 SP2Q02086 613 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 TRIM32Q13049 653 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 PTGDRQ13258 359 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 PDIA5Q14554 519 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 SLC39A14Q15043 492 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 ZNF174Q15697 407 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 PRAMEF19Q5SWL8 479 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 ANO1Q5XXA6 986 aa9.82□□□□□ -0.84
LRRC28-215ENST00000559774 ZNF746Q6NUN9 644 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms