RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 NSUN6Q8TEA1 469 aaKnown RBP19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 PNMA5Q96PV4 448 aa19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 MTRQ99707 1265 aa19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 DISC1Q9NRI5 854 aa19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 KCNH7Q9NS40 1196 aa19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 PLXNA1Q9UIW2 1896 aa19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 ZSWIM8A7E2V4 1837 aa19.53■□□□□ 0.72
CHRNA3-206ENST00000559658 PLCG1P19174 1290 aa19.53■□□□□ 0.72
CHRNA3-206ENST00000559658 UBA7P41226 1012 aa19.53■□□□□ 0.72
CHRNA3-206ENST00000559658 ALDH5A1P51649 535 aaPredicted RBP19.53■□□□□ 0.72
CHRNA3-206ENST00000559658 SEMA3FQ13275 785 aa19.53■□□□□ 0.72
CHRNA3-206ENST00000559658 ITGB3BPQ13352 177 aaPredicted RBP19.53■□□□□ 0.72
CHRNA3-206ENST00000559658 VSIG10LQ86VR7 867 aa19.53■□□□□ 0.72
CHRNA3-206ENST00000559658 SLC5A5Q92911 643 aa19.53■□□□□ 0.72
CHRNA3-206ENST00000559658 TIGD1Q96MW7 591 aa19.53■□□□□ 0.72
CHRNA3-206ENST00000559658 CCSER1Q9C0I3 900 aa19.53■□□□□ 0.72
CHRNA3-206ENST00000559658 MORF4L1Q9UBU8 362 aa19.53■□□□□ 0.72
CHRNA3-206ENST00000559658 DDX39AO00148 427 aaKnown RBP19.52■□□□□ 0.72
CHRNA3-206ENST00000559658 EML1O00423 815 aa19.52■□□□□ 0.72
CHRNA3-206ENST00000559658 TBX3O15119 743 aa19.52■□□□□ 0.72
CHRNA3-206ENST00000559658 PSMD10O75832 226 aa19.52■□□□□ 0.72
CHRNA3-206ENST00000559658 MDM2Q00987 491 aaPredicted RBP19.52■□□□□ 0.72
CHRNA3-206ENST00000559658 GRB10Q13322 594 aa19.52■□□□□ 0.72
CHRNA3-206ENST00000559658 NCAPH2Q6IBW4 605 aa19.52■□□□□ 0.72
CHRNA3-206ENST00000559658 KCNK18Q7Z418 384 aa19.52■□□□□ 0.72
CHRNA3-206ENST00000559658 SLFN12Q8IYM2 578 aa19.52■□□□□ 0.72
CHRNA3-206ENST00000559658 SNX29Q8TEQ0 813 aa19.52■□□□□ 0.72
CHRNA3-206ENST00000559658 AK8Q96MA6 479 aa19.52■□□□□ 0.72
CHRNA3-206ENST00000559658 MMP19Q99542 508 aa19.52■□□□□ 0.72
CHRNA3-206ENST00000559658 ZNF577Q9BSK1 485 aa19.52■□□□□ 0.72
CHRNA3-206ENST00000559658 JADE2Q9NQC1 790 aa19.52■□□□□ 0.72
CHRNA3-206ENST00000559658 POTEB2H3BUK9 544 aa19.52■□□□□ 0.71
CHRNA3-206ENST00000559658 CHMP2AO43633 222 aa19.52■□□□□ 0.71
CHRNA3-206ENST00000559658 AOC2O75106 756 aa19.52■□□□□ 0.71
CHRNA3-206ENST00000559658 ATP9AO75110 1047 aa19.52■□□□□ 0.71
CHRNA3-206ENST00000559658 AFMP43652 599 aa19.52■□□□□ 0.71
CHRNA3-206ENST00000559658 GCLCP48506 637 aaPredicted RBP19.52■□□□□ 0.71
CHRNA3-206ENST00000559658 MTMR1Q13613 665 aa19.52■□□□□ 0.71
CHRNA3-206ENST00000559658 TAF1CQ15572 869 aaPredicted RBP19.52■□□□□ 0.71
CHRNA3-206ENST00000559658 RASSF8Q8NHQ8 419 aa19.52■□□□□ 0.71
CHRNA3-206ENST00000559658 GTF3C2Q8WUA4 911 aaPredicted RBP19.52■□□□□ 0.71
CHRNA3-206ENST00000559658 BCAS3Q9H6U6 928 aa19.52■□□□□ 0.71
CHRNA3-206ENST00000559658 DNAJC25-GNG10A0A024R161 153 aa19.51■□□□□ 0.71
CHRNA3-206ENST00000559658 IPO5O00410 1097 aaKnown RBP19.51■□□□□ 0.71
CHRNA3-206ENST00000559658 CCND2P30279 289 aa19.51■□□□□ 0.71
CHRNA3-206ENST00000559658 SETQ01105 290 aaPredicted RBP19.51■□□□□ 0.71
CHRNA3-206ENST00000559658 LRCH2Q5VUJ6 765 aa19.51■□□□□ 0.71
CHRNA3-206ENST00000559658 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.51■□□□□ 0.71
CHRNA3-206ENST00000559658 SHCBP1Q8NEM2 672 aa19.51■□□□□ 0.71
CHRNA3-206ENST00000559658 PAGE5Q96GU1 130 aa19.51■□□□□ 0.71
CHRNA3-206ENST00000559658 FAM20AQ96MK3 541 aa19.51■□□□□ 0.71
CHRNA3-206ENST00000559658 MROH8Q9H579 483 aa19.51■□□□□ 0.71
CHRNA3-206ENST00000559658 AGO4Q9HCK5 861 aaKnown RBP19.51■□□□□ 0.71
CHRNA3-206ENST00000559658 TELO2Q9Y4R8 837 aa19.51■□□□□ 0.71
CHRNA3-206ENST00000559658 MED24O75448 989 aa19.5■□□□□ 0.71
CHRNA3-206ENST00000559658 SLFN14P0C7P3 912 aa19.5■□□□□ 0.71
CHRNA3-206ENST00000559658 TXLNAP40222 546 aa19.5■□□□□ 0.71
CHRNA3-206ENST00000559658 STAT6P42226 847 aa19.5■□□□□ 0.71
CHRNA3-206ENST00000559658 HTRA3P83110 453 aa19.5■□□□□ 0.71
CHRNA3-206ENST00000559658 PDIA5Q14554 519 aa19.5■□□□□ 0.71
CHRNA3-206ENST00000559658 FAM110CQ1W6H9 321 aa19.5■□□□□ 0.71
CHRNA3-206ENST00000559658 CCDC102AQ96A19 550 aa19.5■□□□□ 0.71
CHRNA3-206ENST00000559658 DOCK3Q8IZD9 2030 aa19.5■□□□□ 0.71
CHRNA3-206ENST00000559658 POTEB3A0JP26 581 aa19.5■□□□□ 0.71
CHRNA3-206ENST00000559658 BIN1O00499 593 aa19.5■□□□□ 0.71
CHRNA3-206ENST00000559658 DHX15O43143 795 aaKnown RBP19.5■□□□□ 0.71
CHRNA3-206ENST00000559658 TYRO3Q06418 890 aa19.5■□□□□ 0.71
CHRNA3-206ENST00000559658 KCTD2Q14681 263 aa19.5■□□□□ 0.71
CHRNA3-206ENST00000559658 POTEBQ6S5H4 581 aa19.5■□□□□ 0.71
CHRNA3-206ENST00000559658 OTOP1Q7RTM1 612 aa19.5■□□□□ 0.71
CHRNA3-206ENST00000559658 SH3RF1Q7Z6J0 888 aa19.5■□□□□ 0.71
CHRNA3-206ENST00000559658 INPP4AQ96PE3 977 aaPredicted RBP19.5■□□□□ 0.71
CHRNA3-206ENST00000559658 UNC45AQ9H3U1 944 aa19.5■□□□□ 0.71
CHRNA3-206ENST00000559658 SORBS3O60504 671 aa19.49■□□□□ 0.71
CHRNA3-206ENST00000559658 GAS7O60861 476 aa19.49■□□□□ 0.71
CHRNA3-206ENST00000559658 BCRP11274 1271 aa19.49■□□□□ 0.71
CHRNA3-206ENST00000559658 FCER1AP12319 257 aa19.49■□□□□ 0.71
CHRNA3-206ENST00000559658 CRHR2Q13324 411 aa19.49■□□□□ 0.71
CHRNA3-206ENST00000559658 POSTNQ15063 836 aa19.49■□□□□ 0.71
CHRNA3-206ENST00000559658 RRAGBQ5VZM2 374 aa19.49■□□□□ 0.71
CHRNA3-206ENST00000559658 ISM2Q6H9L7 571 aa19.49■□□□□ 0.71
CHRNA3-206ENST00000559658 NIPA1Q7RTP0 329 aa19.49■□□□□ 0.71
CHRNA3-206ENST00000559658 IQUBQ8NA54 791 aa19.49■□□□□ 0.71
CHRNA3-206ENST00000559658 DNERQ8NFT8 737 aa19.49■□□□□ 0.71
CHRNA3-206ENST00000559658 HHIPL1Q96JK4 782 aa19.49■□□□□ 0.71
CHRNA3-206ENST00000559658 RBSNQ9H1K0 784 aa19.49■□□□□ 0.71
CHRNA3-206ENST00000559658 BLZF1Q9H2G9 400 aa19.49■□□□□ 0.71
CHRNA3-206ENST00000559658 BLOC1S4Q9NUP1 217 aa19.49■□□□□ 0.71
CHRNA3-206ENST00000559658 KIAA1468Q9P260 1216 aa19.49■□□□□ 0.71
CHRNA3-206ENST00000559658 CENPFP49454 3210 aa19.49■□□□□ 0.71
CHRNA3-206ENST00000559658 FSD2A1L4K1 749 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 POTEFA5A3E0 1075 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 CTAGE5O15320 804 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 COBLO75128 1261 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 EDNRBP24530 442 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 COPB2P35606 906 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 CYP4A11Q02928 519 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 POTEGQ6S5H5 508 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 B3GNT9Q6UX72 402 aa19.48■□□□□ 0.71
CHRNA3-206ENST00000559658 EEPD1Q7L9B9 569 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms