RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 MTA3Q9BTC8 594 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 MYL10Q9BUA6 226 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 SPZ1Q9BXG8 430 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 GTF2IRD1Q9UHL9 959 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 MYO9BQ13459 2157 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 KIAA1671Q9BY89 1806 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 RALGAPA2Q2PPJ7 1873 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 COL4A6Q14031 1691 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 BDP1A6H8Y1 2624 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 SPATA31C2B4DYI2 1134 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 PIK3CDO00329 1044 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 SLC27A2O14975 620 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 PRC1O43663 620 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 DHX16O60231 1041 aaKnown RBP6.43□□□□□ -1.38
SMAD3-209ENST00000558894 NBNO60934 754 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 PLEKHA8P1O95397 391 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 CXCL10P02778 98 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 PFKMP08237 780 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 MYCLP12524 364 aaPredicted RBP6.43□□□□□ -1.38
SMAD3-209ENST00000558894 CASTP20810 708 aaKnown RBP6.43□□□□□ -1.38
SMAD3-209ENST00000558894 UBA1P22314 1058 aaKnown RBP6.43□□□□□ -1.38
SMAD3-209ENST00000558894 ICAM3P32942 547 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 RFC2P35250 354 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 PSEN2P49810 448 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 ZNF200P98182 395 aaPredicted RBP6.43□□□□□ -1.38
SMAD3-209ENST00000558894 EXOSC10Q01780 885 aaKnown RBP6.43□□□□□ -1.38
SMAD3-209ENST00000558894 FUT2Q10981 343 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 TRDNQ13061 729 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 LAMC2Q13753 1193 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 PTGISQ16647 500 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 TMEM67Q5HYA8 995 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 CELF3Q5SZQ8 465 aaKnown RBP6.43□□□□□ -1.38
SMAD3-209ENST00000558894 CREB3L3Q68CJ9 461 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 SPRED2Q7Z698 418 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 DEFB128Q7Z7B8 93 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 RPUSD2Q8IZ73 545 aaKnown RBP6.43□□□□□ -1.38
SMAD3-209ENST00000558894 ZNF654Q8IZM8 581 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 PPTC7Q8NI37 304 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 INPP4AQ96PE3 977 aaPredicted RBP6.43□□□□□ -1.38
SMAD3-209ENST00000558894 OSBPL7Q9BZF2 842 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 NKX2-4Q9H2Z4 354 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 PRDM12Q9H4Q4 367 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 HDAC6Q9UBN7 1215 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 PCDHA11Q9Y5I1 949 aa6.43□□□□□ -1.38
SMAD3-209ENST00000558894 TCF20Q9UGU0 1960 aaKnown RBP6.42□□□□□ -1.38
SMAD3-209ENST00000558894 EPOPA6NHQ4 379 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 GCOM1H8Y6P7 765 aaPredicted RBP6.42□□□□□ -1.38
SMAD3-209ENST00000558894 PPFIA4O75335 1185 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 DDAH1O94760 285 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 GGPS1O95749 300 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 POLR2MP0CAP2 368 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 ZNF286BP0CG31 522 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 TGFB3P10600 412 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 CKBP12277 381 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 RXRAP19793 462 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 POU3F3P20264 500 aaPredicted RBP6.42□□□□□ -1.38
SMAD3-209ENST00000558894 LIFRP42702 1097 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 ADAM17P78536 824 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 MFSD10Q14728 455 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 RAB30Q15771 203 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 DGKDQ16760 1214 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 KIAA0753Q2KHM9 967 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 BRDTQ58F21 947 aaPredicted RBP6.42□□□□□ -1.38
SMAD3-209ENST00000558894 BMP2KLQ5H9B9 411 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 FAM47CQ5HY64 1035 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 TYW1BQ6NUM6 668 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 USP17L6PQ6QN14 398 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 TMCO2Q7Z6W1 182 aaPredicted RBP6.42□□□□□ -1.38
SMAD3-209ENST00000558894 RALYLQ86SE5 291 aaKnown RBP6.42□□□□□ -1.38
SMAD3-209ENST00000558894 SGMS1Q86VZ5 419 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 FCHSD1Q86WN1 690 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 DHX37Q8IY37 1157 aaKnown RBP6.42□□□□□ -1.38
SMAD3-209ENST00000558894 RASEFQ8IZ41 740 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 AFAP1L1Q8TED9 768 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 FAM122AQ96E09 287 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 BRPF3Q9ULD4 1205 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 MRVI1Q9Y6F6 885 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 SLC4A7Q9Y6M7 1214 aa6.42□□□□□ -1.38
SMAD3-209ENST00000558894 PIEZO1Q92508 2521 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 PRRC2BQ5JSZ5 2229 aaKnown RBP6.41□□□□□ -1.38
SMAD3-209ENST00000558894 hCG_1642624A0A1W2PR95 340 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 ERICH2A1L162 156 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 SORBS3O60504 671 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 LPXNO60711 386 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 ATP9AO75110 1047 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 CA3P07451 260 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 SELPP16109 830 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 ATP2A2P16615 1042 aaKnown RBP6.41□□□□□ -1.38
SMAD3-209ENST00000558894 ITGB5P18084 799 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 CCND2P30279 289 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 MCM5P33992 734 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 DEFB103AP81534 67 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 TAP1Q03518 808 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 PTK7Q13308 1070 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 BFSP2Q13515 415 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 ADCK5Q3MIX3 580 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 TSGA10IPQ3SY00 556 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 ZNF618Q5T7W0 954 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 PCNX4Q63HM2 1172 aa6.41□□□□□ -1.38
SMAD3-209ENST00000558894 KCNV1Q6PIU1 500 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms