RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 RFXAPO00287 272 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 PITPNM1O00562 1244 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 POLR2MP0CAP2 368 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 ACTN1P12814 892 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 LAMC2Q13753 1193 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 GPNMBQ14956 572 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 SART3Q15020 963 aaKnown RBP13.35□□□□□ -0.27
CASC4-205ENST00000558735 PGM5Q15124 567 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 SKIV2LQ15477 1246 aaKnown RBP13.35□□□□□ -0.27
CASC4-205ENST00000558735 PTGISQ16647 500 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 DGKDQ16760 1214 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 MYSM1Q5VVJ2 828 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 GDF6Q6KF10 455 aaPredicted RBP13.35□□□□□ -0.27
CASC4-205ENST00000558735 CATIPQ7Z7H3 387 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 SESTD1Q86VW0 696 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 FCHSD1Q86WN1 690 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 DHX37Q8IY37 1157 aaKnown RBP13.35□□□□□ -0.27
CASC4-205ENST00000558735 RETREG2Q8NC44 543 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 HLA-CQ95604 372 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 LSG1Q9H089 658 aaKnown RBP13.35□□□□□ -0.27
CASC4-205ENST00000558735 LY9Q9HBG7 655 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 C11orf16Q9NQ32 467 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 LMCD1Q9NZU5 365 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 MRVI1Q9Y6F6 885 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 HAS3O00219 553 aa13.34□□□□□ -0.27
CASC4-205ENST00000558735 PPFIA4O75335 1185 aa13.34□□□□□ -0.27
CASC4-205ENST00000558735 TRAF1Q13077 416 aa13.34□□□□□ -0.27
CASC4-205ENST00000558735 NECTIN1Q15223 517 aa13.34□□□□□ -0.27
CASC4-205ENST00000558735 CELF3Q5SZQ8 465 aaKnown RBP13.34□□□□□ -0.27
CASC4-205ENST00000558735 HERC6Q8IVU3 1022 aa13.34□□□□□ -0.27
CASC4-205ENST00000558735 PIBF1Q8WXW3 757 aa13.34□□□□□ -0.27
CASC4-205ENST00000558735 MAP3K14Q99558 947 aa13.34□□□□□ -0.27
CASC4-205ENST00000558735 BCAS3Q9H6U6 928 aa13.34□□□□□ -0.27
CASC4-205ENST00000558735 HDAC6Q9UBN7 1215 aa13.34□□□□□ -0.27
CASC4-205ENST00000558735 PI4K2BG5E9Z4 385 aa13.33□□□□□ -0.28
CASC4-205ENST00000558735 SLC27A2O14975 620 aa13.33□□□□□ -0.28
CASC4-205ENST00000558735 SORBS3O60504 671 aa13.33□□□□□ -0.28
CASC4-205ENST00000558735 LPXNO60711 386 aa13.33□□□□□ -0.28
CASC4-205ENST00000558735 BAIAP3O94812 1187 aa13.33□□□□□ -0.28
CASC4-205ENST00000558735 TGFB3P10600 412 aa13.33□□□□□ -0.28
CASC4-205ENST00000558735 HOXD8P13378 290 aaPredicted RBP13.33□□□□□ -0.28
CASC4-205ENST00000558735 PSEN2P49810 448 aa13.33□□□□□ -0.28
CASC4-205ENST00000558735 MRPS9P82933 396 aaKnown RBP13.33□□□□□ -0.28
CASC4-205ENST00000558735 BFSP2Q13515 415 aa13.33□□□□□ -0.28
CASC4-205ENST00000558735 HSDL1Q3SXM5 330 aa13.33□□□□□ -0.28
CASC4-205ENST00000558735 KCNV1Q6PIU1 500 aa13.33□□□□□ -0.28
CASC4-205ENST00000558735 ZNF654Q8IZM8 581 aa13.33□□□□□ -0.28
CASC4-205ENST00000558735 PPTC7Q8NI37 304 aa13.33□□□□□ -0.28
CASC4-205ENST00000558735 DHX38Q92620 1227 aaKnown RBP13.33□□□□□ -0.28
CASC4-205ENST00000558735 GPKOWQ92917 476 aaPredicted RBP eCLIP13.33□□□□□ -0.28
CASC4-205ENST00000558735 ESYT1Q9BSJ8 1104 aa13.33□□□□□ -0.28
CASC4-205ENST00000558735 ALG1Q9BT22 464 aa13.33□□□□□ -0.28
CASC4-205ENST00000558735 MTA3Q9BTC8 594 aa13.33□□□□□ -0.28
CASC4-205ENST00000558735 MYL10Q9BUA6 226 aa13.33□□□□□ -0.28
CASC4-205ENST00000558735 GTF2IRD1Q9UHL9 959 aa13.33□□□□□ -0.28
CASC4-205ENST00000558735 NOD1Q9Y239 953 aa13.33□□□□□ -0.28
CASC4-205ENST00000558735 MYH6P13533 1939 aa13.33□□□□□ -0.28
CASC4-205ENST00000558735 KIF28PB7ZC32 967 aa13.32□□□□□ -0.28
CASC4-205ENST00000558735 RBAK-RBAKDNI3L0D1 243 aa13.32□□□□□ -0.28
CASC4-205ENST00000558735 PRC1O43663 620 aa13.32□□□□□ -0.28
CASC4-205ENST00000558735 ARHGEF15O94989 841 aa13.32□□□□□ -0.28
CASC4-205ENST00000558735 GGPS1O95749 300 aa13.32□□□□□ -0.28
CASC4-205ENST00000558735 SMARCA1P28370 1054 aa13.32□□□□□ -0.28
CASC4-205ENST00000558735 CCND2P30279 289 aa13.32□□□□□ -0.28
CASC4-205ENST00000558735 GRB10Q13322 594 aa13.32□□□□□ -0.28
CASC4-205ENST00000558735 KIAA0753Q2KHM9 967 aa13.32□□□□□ -0.28
CASC4-205ENST00000558735 KRT40Q6A162 431 aa13.32□□□□□ -0.28
CASC4-205ENST00000558735 SKAP1Q86WV1 359 aa13.32□□□□□ -0.28
CASC4-205ENST00000558735 TMTC2Q8N394 836 aa13.32□□□□□ -0.28
CASC4-205ENST00000558735 SRBD1Q8N5C6 995 aaKnown RBP13.32□□□□□ -0.28
CASC4-205ENST00000558735 KHSRPQ92945 711 aaKnown RBP eCLIP13.32□□□□□ -0.281e-8■■■□□ 14.6
CASC4-205ENST00000558735 SPATA33Q96N06 139 aa13.32□□□□□ -0.28
CASC4-205ENST00000558735 SPZ1Q9BXG8 430 aa13.32□□□□□ -0.28
CASC4-205ENST00000558735 FTOQ9C0B1 505 aaKnown RBP eCLIP13.32□□□□□ -0.28
CASC4-205ENST00000558735 MUC6Q6W4X9 2439 aa13.32□□□□□ -0.28
CASC4-205ENST00000558735 KIAA1217Q5T5P2 1943 aa13.31□□□□□ -0.28
CASC4-205ENST00000558735 SH2B2O14492 632 aaPredicted RBP13.31□□□□□ -0.28
CASC4-205ENST00000558735 MEIS2O14770 477 aa13.31□□□□□ -0.28
CASC4-205ENST00000558735 DDAH1O94760 285 aa13.31□□□□□ -0.28
CASC4-205ENST00000558735 F2P00734 622 aa13.31□□□□□ -0.28
CASC4-205ENST00000558735 ZNF286BP0CG31 522 aa13.31□□□□□ -0.28
CASC4-205ENST00000558735 MCM5P33992 734 aa13.31□□□□□ -0.28
CASC4-205ENST00000558735 ZNF200P98182 395 aaPredicted RBP13.31□□□□□ -0.28
CASC4-205ENST00000558735 HIC1Q14526 733 aa13.31□□□□□ -0.28
CASC4-205ENST00000558735 MFSD10Q14728 455 aa13.31□□□□□ -0.28
CASC4-205ENST00000558735 CREB3L3Q68CJ9 461 aa13.31□□□□□ -0.28
CASC4-205ENST00000558735 USP17L6PQ6QN14 398 aa13.31□□□□□ -0.28
CASC4-205ENST00000558735 CASC1Q6TDU7 716 aa13.31□□□□□ -0.28
CASC4-205ENST00000558735 C7orf31Q8N865 590 aa13.31□□□□□ -0.28
CASC4-205ENST00000558735 CAGE1Q8TC20 777 aa13.31□□□□□ -0.28
CASC4-205ENST00000558735 AFAP1L1Q8TED9 768 aa13.31□□□□□ -0.28
CASC4-205ENST00000558735 ARNTL2Q8WYA1 636 aa13.31□□□□□ -0.28
CASC4-205ENST00000558735 TMEM87BQ96K49 555 aa13.31□□□□□ -0.28
CASC4-205ENST00000558735 C16orf70Q9BSU1 422 aa13.31□□□□□ -0.28
CASC4-205ENST00000558735 CERS4Q9HA82 394 aa13.31□□□□□ -0.28
CASC4-205ENST00000558735 RTEL1Q9NZ71 1219 aa13.31□□□□□ -0.28
CASC4-205ENST00000558735 TET1Q8NFU7 2136 aa13.3□□□□□ -0.28
CASC4-205ENST00000558735 SPATA31C2B4DYI2 1134 aa13.3□□□□□ -0.28
CASC4-205ENST00000558735 PLEKHA8P1O95397 391 aa13.3□□□□□ -0.28
CASC4-205ENST00000558735 CKBP12277 381 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms