RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 MYH15Q9Y2K3 1946 aa14.03□□□□□ -0.16
TPM1-209ENST00000558072 SOWAHBA6NEL2 793 aa14.02□□□□□ -0.17
TPM1-209ENST00000558072 FKTNO75072 461 aa14.02□□□□□ -0.17
TPM1-209ENST00000558072 PRPF40AO75400 957 aaKnown RBP14.02□□□□□ -0.17
TPM1-209ENST00000558072 HOXC6P09630 235 aa14.02□□□□□ -0.17
TPM1-209ENST00000558072 MYCLP12524 364 aaPredicted RBP14.02□□□□□ -0.17
TPM1-209ENST00000558072 EDNRBP24530 442 aa14.02□□□□□ -0.17
TPM1-209ENST00000558072 LBX1P52954 281 aa14.02□□□□□ -0.17
TPM1-209ENST00000558072 PRKCZQ05513 592 aa14.02□□□□□ -0.17
TPM1-209ENST00000558072 MTMR1Q13613 665 aa14.02□□□□□ -0.17
TPM1-209ENST00000558072 CCL14Q16627 93 aa14.02□□□□□ -0.17
TPM1-209ENST00000558072 ZNF792Q3KQV3 632 aa14.02□□□□□ -0.17
TPM1-209ENST00000558072 PRR16Q569H4 304 aa14.02□□□□□ -0.17
TPM1-209ENST00000558072 KCTD17Q8N5Z5 321 aa14.02□□□□□ -0.17
TPM1-209ENST00000558072 MORC4Q8TE76 937 aa14.02□□□□□ -0.17
TPM1-209ENST00000558072 CHAMP1Q96JM3 812 aa14.02□□□□□ -0.17
TPM1-209ENST00000558072 RIT2Q99578 217 aa14.02□□□□□ -0.17
TPM1-209ENST00000558072 ANP32EQ9BTT0 268 aa14.02□□□□□ -0.17
TPM1-209ENST00000558072 PCDHA12Q9UN75 941 aa14.02□□□□□ -0.17
TPM1-209ENST00000558072 MCM3APO60318 1980 aa14.02□□□□□ -0.17
TPM1-209ENST00000558072 SYNGAP1Q96PV0 1343 aa14.01□□□□□ -0.17
TPM1-209ENST00000558072 WNT7AO00755 349 aa14.01□□□□□ -0.17
TPM1-209ENST00000558072 TDP2O95551 362 aa14.01□□□□□ -0.17
TPM1-209ENST00000558072 XRCC5P13010 732 aaKnown RBP14.01□□□□□ -0.17
TPM1-209ENST00000558072 CYP2B6P20813 491 aa14.01□□□□□ -0.17
TPM1-209ENST00000558072 CMA1P23946 247 aa14.01□□□□□ -0.17
TPM1-209ENST00000558072 FXR2P51116 673 aaKnown RBP eCLIP14.01□□□□□ -0.17
TPM1-209ENST00000558072 MORN1Q5T089 497 aa14.01□□□□□ -0.17
TPM1-209ENST00000558072 MAMDC4Q6UXC1 1216 aa14.01□□□□□ -0.17
TPM1-209ENST00000558072 CCDC73Q6ZRK6 1079 aa14.01□□□□□ -0.17
TPM1-209ENST00000558072 ERMNQ8TAM6 284 aa14.01□□□□□ -0.17
TPM1-209ENST00000558072 INPP4AQ96PE3 977 aaPredicted RBP14.01□□□□□ -0.17
TPM1-209ENST00000558072 MTMR9Q96QG7 549 aa14.01□□□□□ -0.17
TPM1-209ENST00000558072 UIMC1Q96RL1 719 aa14.01□□□□□ -0.17
TPM1-209ENST00000558072 VTA1Q9NP79 307 aa14.01□□□□□ -0.17
TPM1-209ENST00000558072 FLRT1Q9NZU1 646 aa14.01□□□□□ -0.17
TPM1-209ENST00000558072 NRBP1Q9UHY1 535 aa14.01□□□□□ -0.17
TPM1-209ENST00000558072 MYH7BA7E2Y1 1941 aa14.01□□□□□ -0.17
TPM1-209ENST00000558072 PTGS1P23219 599 aa14□□□□□ -0.17
TPM1-209ENST00000558072 ICAM3P32942 547 aa14□□□□□ -0.17
TPM1-209ENST00000558072 OLFML2BQ68BL8 750 aa14□□□□□ -0.17
TPM1-209ENST00000558072 C4orf32Q8N8J7 132 aa14□□□□□ -0.17
TPM1-209ENST00000558072 SYAP1Q96A49 352 aaPredicted RBP14□□□□□ -0.17
TPM1-209ENST00000558072 APBA2Q99767 749 aa14□□□□□ -0.17
TPM1-209ENST00000558072 SENP7Q9BQF6 1050 aa14□□□□□ -0.17
TPM1-209ENST00000558072 SDF4Q9BRK5 362 aa14□□□□□ -0.17
TPM1-209ENST00000558072 ZNF577Q9BSK1 485 aa14□□□□□ -0.17
TPM1-209ENST00000558072 KCNMB3Q9NPA1 279 aa14□□□□□ -0.17
TPM1-209ENST00000558072 PCDHA7Q9UN72 937 aa14□□□□□ -0.17
TPM1-209ENST00000558072 IGLV3-22A0A075B6J6 115 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 FAM86B1E9PN63 330 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 GAS7O60861 476 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 FAM86B2P0C5J1 330 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 MARCKSP29966 332 aaPredicted RBP13.99□□□□□ -0.17
TPM1-209ENST00000558072 UBA7P41226 1012 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 TXKP42681 527 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 MRPS9P82933 396 aaKnown RBP13.99□□□□□ -0.17
TPM1-209ENST00000558072 TRIM32Q13049 653 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 NEDD9Q14511 834 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 NBR1Q14596 966 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 NFKBIBQ15653 356 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 HAUS3Q68CZ6 603 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 RDM1Q8NG50 284 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 MRPS27Q92552 414 aaKnown RBP13.99□□□□□ -0.17
TPM1-209ENST00000558072 TEKT3Q9BXF9 490 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 ABHD16BQ9H3Z7 469 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 TTC12Q9H892 705 aaPredicted RBP13.99□□□□□ -0.17
TPM1-209ENST00000558072 GDPD2Q9HCC8 539 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 KCNH7Q9NS40 1196 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 LMBRD1Q9NUN5 540 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 CCDC39Q9UFE4 941 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 USP25Q9UHP3 1055 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 FBXO2Q9UK22 296 aaPredicted RBP13.99□□□□□ -0.17
TPM1-209ENST00000558072 GJD2Q9UKL4 321 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 TCHHQ07283 1943 aa13.99□□□□□ -0.17
TPM1-209ENST00000558072 NFASCO94856 1347 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 VWA3AA6NCI4 1184 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 IPO5O00410 1097 aaKnown RBP13.98□□□□□ -0.17
TPM1-209ENST00000558072 SLC37A4O43826 429 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 EDIL3O43854 480 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 DKC1O60832 514 aaKnown RBP eCLIP13.98□□□□□ -0.17
TPM1-209ENST00000558072 ELNP15502 786 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 ITGB5P18084 799 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 MUTP22033 750 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 SFNP31947 248 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 FLT3LGP49771 235 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 KRT76Q01546 638 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 TTLL4Q14679 1199 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 LRCH2Q5VUJ6 765 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 KRT79Q5XKE5 535 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 OTOP1Q7RTM1 612 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 ETNPPLQ8TBG4 499 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 NEK9Q8TD19 979 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 SCFD2Q8WU76 684 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 USP6NLQ92738 828 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 SLC5A5Q92911 643 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 CALML4Q96GE6 196 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 MAML3Q96JK9 1138 aa13.98□□□□□ -0.17
TPM1-209ENST00000558072 TINF2Q9BSI4 451 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms