RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 RPS6KB1P23443 525 aa19.02■□□□□ 0.64
VSX1-207ENST00000557285 SP4Q02446 784 aa19.02■□□□□ 0.64
VSX1-207ENST00000557285 HSDL1Q3SXM5 330 aa19.02■□□□□ 0.64
VSX1-207ENST00000557285 MYSM1Q5VVJ2 828 aa19.02■□□□□ 0.64
VSX1-207ENST00000557285 ZNF365Q70YC5 407 aa19.02■□□□□ 0.64
VSX1-207ENST00000557285 C16orf59Q7L2K0 433 aa19.02■□□□□ 0.64
VSX1-207ENST00000557285 KAT2BQ92831 832 aa19.02■□□□□ 0.64
VSX1-207ENST00000557285 EMID1Q96A84 441 aaPredicted RBP19.02■□□□□ 0.64
VSX1-207ENST00000557285 WNT8AQ9H1J5 351 aa19.02■□□□□ 0.64
VSX1-207ENST00000557285 FAM217BQ9NTX9 383 aaPredicted RBP19.02■□□□□ 0.64
VSX1-207ENST00000557285 SPDYE3A6NKU9 549 aa19.01■□□□□ 0.63
VSX1-207ENST00000557285 PPFIA3O75145 1194 aa19.01■□□□□ 0.63
VSX1-207ENST00000557285 ADD1P35611 737 aaKnown RBP19.01■□□□□ 0.63
VSX1-207ENST00000557285 PSEN2P49810 448 aa19.01■□□□□ 0.63
VSX1-207ENST00000557285 TMEM240Q5SV17 173 aa19.01■□□□□ 0.63
VSX1-207ENST00000557285 PCNX4Q63HM2 1172 aa19.01■□□□□ 0.63
VSX1-207ENST00000557285 SCN5AQ14524 2016 aa19■□□□□ 0.63
VSX1-207ENST00000557285 NOP56O00567 594 aaKnown RBP19■□□□□ 0.63
VSX1-207ENST00000557285 TGFB3P10600 412 aa19■□□□□ 0.63
VSX1-207ENST00000557285 PSMA5P28066 241 aa19■□□□□ 0.63
VSX1-207ENST00000557285 FUT2Q10981 343 aa19■□□□□ 0.63
VSX1-207ENST00000557285 SEMA3FQ13275 785 aa19■□□□□ 0.63
VSX1-207ENST00000557285 MFSD10Q14728 455 aa19■□□□□ 0.63
VSX1-207ENST00000557285 PTGISQ16647 500 aa19■□□□□ 0.63
VSX1-207ENST00000557285 GDF6Q6KF10 455 aaPredicted RBP19■□□□□ 0.63
VSX1-207ENST00000557285 TYW1BQ6NUM6 668 aa19■□□□□ 0.63
VSX1-207ENST00000557285 GPR153Q6NV75 609 aa19■□□□□ 0.63
VSX1-207ENST00000557285 CYFIP1Q7L576 1253 aa19■□□□□ 0.63
VSX1-207ENST00000557285 DEFB128Q7Z7B8 93 aa19■□□□□ 0.63
VSX1-207ENST00000557285 C7orf31Q8N865 590 aa19■□□□□ 0.63
VSX1-207ENST00000557285 PGBD1Q96JS3 809 aa19■□□□□ 0.63
VSX1-207ENST00000557285 INPP4AQ96PE3 977 aaPredicted RBP19■□□□□ 0.63
VSX1-207ENST00000557285 IL23AQ9NPF7 189 aa19■□□□□ 0.63
VSX1-207ENST00000557285 PKD2L1Q9P0L9 805 aa19■□□□□ 0.63
VSX1-207ENST00000557285 SPATA31C2B4DYI2 1134 aa18.99■□□□□ 0.63
VSX1-207ENST00000557285 STXBP3O00186 592 aa18.99■□□□□ 0.63
VSX1-207ENST00000557285 FIBPO43427 364 aa18.99■□□□□ 0.63
VSX1-207ENST00000557285 STAM2O75886 525 aa18.99■□□□□ 0.63
VSX1-207ENST00000557285 ADCY7P51828 1080 aa18.99■□□□□ 0.63
VSX1-207ENST00000557285 KIAA0753Q2KHM9 967 aa18.99■□□□□ 0.63
VSX1-207ENST00000557285 ZNF697Q5TEC3 545 aa18.99■□□□□ 0.63
VSX1-207ENST00000557285 ERICH6BQ5W0A0 696 aa18.99■□□□□ 0.63
VSX1-207ENST00000557285 PSRC1Q6PGN9 363 aaPredicted RBP18.99■□□□□ 0.63
VSX1-207ENST00000557285 OTOP2Q7RTS6 562 aa18.99■□□□□ 0.63
VSX1-207ENST00000557285 LARP6Q9BRS8 491 aaKnown RBP18.99■□□□□ 0.63
VSX1-207ENST00000557285 KATNAL1Q9BW62 490 aa18.99■□□□□ 0.63
VSX1-207ENST00000557285 HDAC6Q9UBN7 1215 aa18.99■□□□□ 0.63
VSX1-207ENST00000557285 PCDHA6Q9UN73 950 aa18.99■□□□□ 0.63
VSX1-207ENST00000557285 PCDHA8Q9Y5H6 950 aa18.99■□□□□ 0.63
VSX1-207ENST00000557285 TRIP12Q14669 1992 aaPredicted RBP18.99■□□□□ 0.63
VSX1-207ENST00000557285 F2P00734 622 aa18.98■□□□□ 0.63
VSX1-207ENST00000557285 CCT2P78371 535 aaKnown RBP18.98■□□□□ 0.63
VSX1-207ENST00000557285 PTPN11Q06124 597 aaPredicted RBP18.98■□□□□ 0.63
VSX1-207ENST00000557285 FAM109BQ6ICB4 259 aaPredicted RBP18.98■□□□□ 0.63
VSX1-207ENST00000557285 NLRX1Q86UT6 975 aa18.98■□□□□ 0.63
VSX1-207ENST00000557285 RETREG2Q8NC44 543 aa18.98■□□□□ 0.63
VSX1-207ENST00000557285 USP26Q9BXU7 913 aa18.98■□□□□ 0.63
VSX1-207ENST00000557285 UPF3BQ9BZI7 483 aaKnown RBP18.98■□□□□ 0.63
VSX1-207ENST00000557285 TELO2Q9Y4R8 837 aa18.98■□□□□ 0.63
VSX1-207ENST00000557285 COL6A3P12111 3177 aa18.97■□□□□ 0.63
VSX1-207ENST00000557285 CCDC196A0A1B0GTZ2 297 aa18.97■□□□□ 0.63
VSX1-207ENST00000557285 SMCO2A6NFE2 343 aa18.97■□□□□ 0.63
VSX1-207ENST00000557285 GRXCR1A8MXD5 290 aa18.97■□□□□ 0.63
VSX1-207ENST00000557285 FGBP02675 491 aa18.97■□□□□ 0.63
VSX1-207ENST00000557285 ICAM3P32942 547 aa18.97■□□□□ 0.63
VSX1-207ENST00000557285 SMAD3P84022 425 aaKnown RBP18.97■□□□□ 0.63
VSX1-207ENST00000557285 NEDD9Q14511 834 aa18.97■□□□□ 0.63
VSX1-207ENST00000557285 XRRA1Q6P2D8 792 aa18.97■□□□□ 0.63
VSX1-207ENST00000557285 RUFY3Q7L099 469 aa18.97■□□□□ 0.63
VSX1-207ENST00000557285 PHKBQ93100 1093 aa18.97■□□□□ 0.63
VSX1-207ENST00000557285 EHMT1Q9H9B1 1298 aa18.97■□□□□ 0.63
VSX1-207ENST00000557285 NCOA5Q9HCD5 579 aaKnown RBP18.97■□□□□ 0.63
VSX1-207ENST00000557285 RIC8AQ9NPQ8 531 aa18.97■□□□□ 0.63
VSX1-207ENST00000557285 TMEM260Q9NX78 707 aa18.97■□□□□ 0.63
VSX1-207ENST00000557285 MTMR10Q9NXD2 777 aa18.97■□□□□ 0.63
VSX1-207ENST00000557285 CYP46A1Q9Y6A2 500 aa18.97■□□□□ 0.63
VSX1-207ENST00000557285 ZBBXA8MT70 800 aa18.96■□□□□ 0.63
VSX1-207ENST00000557285 RBAK-RBAKDNI3L0D1 243 aa18.96■□□□□ 0.63
VSX1-207ENST00000557285 PPFIA4O75335 1185 aa18.96■□□□□ 0.63
VSX1-207ENST00000557285 ITGB5P18084 799 aa18.96■□□□□ 0.63
VSX1-207ENST00000557285 RCAN1P53805 252 aa18.96■□□□□ 0.63
VSX1-207ENST00000557285 ZNF200P98182 395 aaPredicted RBP18.96■□□□□ 0.63
VSX1-207ENST00000557285 UTP14CQ5TAP6 766 aaKnown RBP18.96■□□□□ 0.63
VSX1-207ENST00000557285 PPP1R18Q6NYC8 613 aa18.96■□□□□ 0.63
VSX1-207ENST00000557285 METTL7BQ6UX53 244 aa18.96■□□□□ 0.63
VSX1-207ENST00000557285 TRIM50Q86XT4 487 aa18.96■□□□□ 0.63
VSX1-207ENST00000557285 BARHL2Q9NY43 387 aa18.96■□□□□ 0.63
VSX1-207ENST00000557285 CXXC1Q9P0U4 656 aaPredicted RBP18.96■□□□□ 0.63
VSX1-207ENST00000557285 GTF2IRD1Q9UHL9 959 aa18.96■□□□□ 0.63
VSX1-207ENST00000557285 TANC1Q9C0D5 1861 aa18.96■□□□□ 0.63
VSX1-207ENST00000557285 LGALS2P05162 132 aa18.95■□□□□ 0.62
VSX1-207ENST00000557285 SCG2P13521 617 aa18.95■□□□□ 0.62
VSX1-207ENST00000557285 AKAP17AQ02040 695 aaKnown RBP18.95■□□□□ 0.62
VSX1-207ENST00000557285 BFSP2Q13515 415 aa18.95■□□□□ 0.62
VSX1-207ENST00000557285 MTMR1Q13613 665 aa18.95■□□□□ 0.62
VSX1-207ENST00000557285 SESTD1Q86VW0 696 aa18.95■□□□□ 0.62
VSX1-207ENST00000557285 RPUSD2Q8IZ73 545 aaKnown RBP18.95■□□□□ 0.62
VSX1-207ENST00000557285 GPR20Q99678 358 aa18.95■□□□□ 0.62
VSX1-207ENST00000557285 C16orf70Q9BSU1 422 aa18.95■□□□□ 0.62
VSX1-207ENST00000557285 FTOQ9C0B1 505 aaKnown RBP eCLIP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms