RNA–Protein interactions for RNA: ENST00000556618.1

RCCD1-206, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RCCD1, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-206ENST00000556618 NEK8Q86SG6 692 aa27.38■■□□□ 1.97
RCCD1-206ENST00000556618 IGLV3-22A0A075B6J6 115 aa27.37■■□□□ 1.97
RCCD1-206ENST00000556618 VPS37CA5D8V6 355 aaPredicted RBP27.37■■□□□ 1.97
RCCD1-206ENST00000556618 MAFGO15525 162 aa27.37■■□□□ 1.97
RCCD1-206ENST00000556618 MTMR1Q13613 665 aa27.37■■□□□ 1.97
RCCD1-206ENST00000556618 LY6KQ17RY6 165 aa27.37■■□□□ 1.97
RCCD1-206ENST00000556618 GJC2Q5T442 439 aaPredicted RBP27.37■■□□□ 1.97
RCCD1-206ENST00000556618 TSHZ2Q9NRE2 1034 aa27.37■■□□□ 1.97
RCCD1-206ENST00000556618 CYP3A7-CYP3A51PA0A087WV96 503 aa27.36■■□□□ 1.97
RCCD1-206ENST00000556618 NKRFO15226 690 aaKnown RBP eCLIP27.36■■□□□ 1.97
RCCD1-206ENST00000556618 SGPL1O95470 568 aa27.36■■□□□ 1.97
RCCD1-206ENST00000556618 PTGS1P23219 599 aa27.36■■□□□ 1.97
RCCD1-206ENST00000556618 CYP3A7P24462 503 aa27.36■■□□□ 1.97
RCCD1-206ENST00000556618 ANP32AP39687 249 aaKnown RBP27.36■■□□□ 1.97
RCCD1-206ENST00000556618 SP2Q02086 613 aa27.36■■□□□ 1.97
RCCD1-206ENST00000556618 LETM2Q2VYF4 491 aa27.36■■□□□ 1.97
RCCD1-206ENST00000556618 U2AF1L4Q8WU68 220 aaKnown RBP27.36■■□□□ 1.97
RCCD1-206ENST00000556618 CDHR1Q96JP9 859 aa27.36■■□□□ 1.97
RCCD1-206ENST00000556618 KCNH7Q9NS40 1196 aa27.36■■□□□ 1.97
RCCD1-206ENST00000556618 GJA8P48165 433 aa27.35■■□□□ 1.97
RCCD1-206ENST00000556618 MOXD1Q6UVY6 613 aa27.35■■□□□ 1.97
RCCD1-206ENST00000556618 PLA2G4DQ86XP0 818 aa27.35■■□□□ 1.97
RCCD1-206ENST00000556618 COPS5Q92905 334 aa27.35■■□□□ 1.97
RCCD1-206ENST00000556618 CRISPLD2Q9H0B8 497 aa27.35■■□□□ 1.97
RCCD1-206ENST00000556618 Q9Y3F1 56 aa27.35■■□□□ 1.97
RCCD1-206ENST00000556618 STX6O43752 255 aa27.35■■□□□ 1.97
RCCD1-206ENST00000556618 TDP2O95551 362 aa27.35■■□□□ 1.97
RCCD1-206ENST00000556618 ARP10275 920 aa27.35■■□□□ 1.97
RCCD1-206ENST00000556618 PRR16Q569H4 304 aa27.35■■□□□ 1.97
RCCD1-206ENST00000556618 MBOAT7Q96N66 472 aa27.35■■□□□ 1.97
RCCD1-206ENST00000556618 XPNPEP3Q9NQH7 507 aa27.35■■□□□ 1.97
RCCD1-206ENST00000556618 DYNC1LI2O43237 492 aaPredicted RBP27.34■■□□□ 1.97
RCCD1-206ENST00000556618 PPP4R3AQ6IN85 833 aa27.34■■□□□ 1.97
RCCD1-206ENST00000556618 TLK2Q86UE8 772 aa27.34■■□□□ 1.97
RCCD1-206ENST00000556618 LENG9Q96B70 501 aa27.34■■□□□ 1.97
RCCD1-206ENST00000556618 SENP7Q9BQF6 1050 aa27.34■■□□□ 1.97
RCCD1-206ENST00000556618 OGDHLQ9ULD0 1010 aa27.34■■□□□ 1.97
RCCD1-206ENST00000556618 MTMR6Q9Y217 621 aa27.34■■□□□ 1.97
RCCD1-206ENST00000556618 ATP9AO75110 1047 aa27.33■■□□□ 1.97
RCCD1-206ENST00000556618 PGK1P00558 417 aa27.33■■□□□ 1.97
RCCD1-206ENST00000556618 UBA1P22314 1058 aaKnown RBP27.33■■□□□ 1.97
RCCD1-206ENST00000556618 SETQ01105 290 aaPredicted RBP27.33■■□□□ 1.97
RCCD1-206ENST00000556618 Q4G0T1 1027 aa27.33■■□□□ 1.97
RCCD1-206ENST00000556618 NAP1L4Q99733 375 aaKnown RBP27.33■■□□□ 1.97
RCCD1-206ENST00000556618 UPF3AQ9H1J1 476 aaKnown RBP27.33■■□□□ 1.97
RCCD1-206ENST00000556618 SYNRGQ9UMZ2 1314 aa27.33■■□□□ 1.97
RCCD1-206ENST00000556618 POTEFA5A3E0 1075 aa27.32■■□□□ 1.96
RCCD1-206ENST00000556618 CCNT1O60563 726 aaKnown RBP27.32■■□□□ 1.96
RCCD1-206ENST00000556618 GH1P01241 217 aa27.32■■□□□ 1.96
RCCD1-206ENST00000556618 TFRCP02786 760 aaKnown RBP27.32■■□□□ 1.96
RCCD1-206ENST00000556618 GCFC2P16383 781 aaKnown RBP27.32■■□□□ 1.96
RCCD1-206ENST00000556618 GJA9P57773 515 aa27.32■■□□□ 1.96
RCCD1-206ENST00000556618 AP5M1Q9H0R1 490 aa27.32■■□□□ 1.96
RCCD1-206ENST00000556618 BCAS3Q9H6U6 928 aa27.32■■□□□ 1.96
RCCD1-206ENST00000556618 RBM19Q9Y4C8 960 aaKnown RBP27.32■■□□□ 1.96
RCCD1-206ENST00000556618 CCDC85CA6NKD9 419 aa27.31■■□□□ 1.96
RCCD1-206ENST00000556618 ADAMTS4O75173 837 aa27.31■■□□□ 1.96
RCCD1-206ENST00000556618 PDIA4P13667 645 aaKnown RBP27.31■■□□□ 1.96
RCCD1-206ENST00000556618 KCNA2P16389 499 aa27.31■■□□□ 1.96
RCCD1-206ENST00000556618 ARHGAP1Q07960 439 aa27.31■■□□□ 1.96
RCCD1-206ENST00000556618 NEDD9Q14511 834 aa27.31■■□□□ 1.96
RCCD1-206ENST00000556618 DHX37Q8IY37 1157 aaKnown RBP27.31■■□□□ 1.96
RCCD1-206ENST00000556618 AGO4Q9HCK5 861 aaKnown RBP27.31■■□□□ 1.96
RCCD1-206ENST00000556618 DDX25Q9UHL0 483 aaKnown RBP27.31■■□□□ 1.96
RCCD1-206ENST00000556618 WNT7AO00755 349 aa27.31■■□□□ 1.96
RCCD1-206ENST00000556618 GGPS1O95749 300 aa27.31■■□□□ 1.96
RCCD1-206ENST00000556618 NKX3-2P78367 333 aa27.31■■□□□ 1.96
RCCD1-206ENST00000556618 CELF3Q5SZQ8 465 aaKnown RBP27.31■■□□□ 1.96
RCCD1-206ENST00000556618 MYSM1Q5VVJ2 828 aa27.31■■□□□ 1.96
RCCD1-206ENST00000556618 FERMT3Q86UX7 667 aa27.31■■□□□ 1.96
RCCD1-206ENST00000556618 OR6J1Q8NGC5 347 aa27.31■■□□□ 1.96
RCCD1-206ENST00000556618 SPC25Q9HBM1 224 aa27.31■■□□□ 1.96
RCCD1-206ENST00000556618 PKD2L1Q9P0L9 805 aa27.31■■□□□ 1.96
RCCD1-206ENST00000556618 CTAGE5O15320 804 aa27.3■■□□□ 1.96
RCCD1-206ENST00000556618 C6orf222P0C671 652 aaPredicted RBP27.3■■□□□ 1.96
RCCD1-206ENST00000556618 CAPN2P17655 700 aa27.3■■□□□ 1.96
RCCD1-206ENST00000556618 ATP2B1P20020 1258 aa27.3■■□□□ 1.96
RCCD1-206ENST00000556618 TRAPPC10P48553 1259 aa27.3■■□□□ 1.96
RCCD1-206ENST00000556618 IRX5P78411 483 aaPredicted RBP27.3■■□□□ 1.96
RCCD1-206ENST00000556618 ARRDC4Q8NCT1 418 aa27.3■■□□□ 1.96
RCCD1-206ENST00000556618 GIMAP8Q8ND71 665 aaPredicted RBP27.3■■□□□ 1.96
RCCD1-206ENST00000556618 EMID1Q96A84 441 aaPredicted RBP27.3■■□□□ 1.96
RCCD1-206ENST00000556618 NOL7Q9UMY1 257 aaKnown RBP27.3■■□□□ 1.96
RCCD1-206ENST00000556618 MSH4O15457 936 aa27.29■■□□□ 1.96
RCCD1-206ENST00000556618 SLC37A4O43826 429 aa27.29■■□□□ 1.96
RCCD1-206ENST00000556618 SORBS3O60504 671 aa27.29■■□□□ 1.96
RCCD1-206ENST00000556618 TOB1P50616 345 aaPredicted RBP27.29■■□□□ 1.96
RCCD1-206ENST00000556618 LAMC2Q13753 1193 aa27.29■■□□□ 1.96
RCCD1-206ENST00000556618 LRRC41Q15345 812 aa27.29■■□□□ 1.96
RCCD1-206ENST00000556618 CYFIP1Q7L576 1253 aa27.29■■□□□ 1.96
RCCD1-206ENST00000556618 BRAPQ7Z569 592 aa27.29■■□□□ 1.96
RCCD1-206ENST00000556618 UIMC1Q96RL1 719 aa27.29■■□□□ 1.96
RCCD1-206ENST00000556618 ZNF577Q9BSK1 485 aa27.29■■□□□ 1.96
RCCD1-206ENST00000556618 MLXIPQ9HAP2 919 aa27.29■■□□□ 1.96
RCCD1-206ENST00000556618 DNAH12Q6ZR08 3092 aa27.29■■□□□ 1.96
RCCD1-206ENST00000556618 ITGB3BPQ13352 177 aaPredicted RBP27.28■■□□□ 1.96
RCCD1-206ENST00000556618 RNF180Q86T96 592 aa27.28■■□□□ 1.96
RCCD1-206ENST00000556618 KLHDC9Q8NEP7 349 aa27.28■■□□□ 1.96
RCCD1-206ENST00000556618 MYADML2A6NDP7 307 aa27.27■■□□□ 1.96
RCCD1-206ENST00000556618 IPO5O00410 1097 aaKnown RBP27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms