RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 PITPNM1O00562 1244 aa12.2□□□□□ -0.46
SPTLC2-205ENST00000556607 NOP56O00567 594 aaKnown RBP12.2□□□□□ -0.46
SPTLC2-205ENST00000556607 SH2B2O14492 632 aaPredicted RBP12.2□□□□□ -0.46
SPTLC2-205ENST00000556607 RGS20O76081 388 aa12.2□□□□□ -0.46
SPTLC2-205ENST00000556607 PLEKHA8P1O95397 391 aa12.2□□□□□ -0.46
SPTLC2-205ENST00000556607 ATP2A2P16615 1042 aaKnown RBP12.2□□□□□ -0.46
SPTLC2-205ENST00000556607 RFC2P35250 354 aa12.2□□□□□ -0.46
SPTLC2-205ENST00000556607 GHRHRQ02643 423 aa12.2□□□□□ -0.46
SPTLC2-205ENST00000556607 CELF3Q5SZQ8 465 aaKnown RBP12.2□□□□□ -0.46
SPTLC2-205ENST00000556607 KAT2BQ92831 832 aa12.2□□□□□ -0.46
SPTLC2-205ENST00000556607 GPKOWQ92917 476 aaPredicted RBP eCLIP12.2□□□□□ -0.46
SPTLC2-205ENST00000556607 MAP3K14Q99558 947 aa12.2□□□□□ -0.46
SPTLC2-205ENST00000556607 LZTS2Q9BRK4 669 aa12.2□□□□□ -0.46
SPTLC2-205ENST00000556607 MTA3Q9BTC8 594 aa12.2□□□□□ -0.46
SPTLC2-205ENST00000556607 SPZ1Q9BXG8 430 aa12.2□□□□□ -0.46
SPTLC2-205ENST00000556607 TGFB3P10600 412 aa12.19□□□□□ -0.46
SPTLC2-205ENST00000556607 MYOGP15173 224 aa12.19□□□□□ -0.46
SPTLC2-205ENST00000556607 UBA1P22314 1058 aaKnown RBP12.19□□□□□ -0.46
SPTLC2-205ENST00000556607 SP2Q02086 613 aa12.19□□□□□ -0.46
SPTLC2-205ENST00000556607 NECTIN1Q15223 517 aa12.19□□□□□ -0.46
SPTLC2-205ENST00000556607 HSDL1Q3SXM5 330 aa12.19□□□□□ -0.46
SPTLC2-205ENST00000556607 BMP2KLQ5H9B9 411 aa12.19□□□□□ -0.46
SPTLC2-205ENST00000556607 MYSM1Q5VVJ2 828 aa12.19□□□□□ -0.46
SPTLC2-205ENST00000556607 PPP2R2DQ66LE6 453 aa12.19□□□□□ -0.46
SPTLC2-205ENST00000556607 USP17L6PQ6QN14 398 aa12.19□□□□□ -0.46
SPTLC2-205ENST00000556607 MICU3Q86XE3 530 aa12.19□□□□□ -0.46
SPTLC2-205ENST00000556607 SRBD1Q8N5C6 995 aaKnown RBP12.19□□□□□ -0.46
SPTLC2-205ENST00000556607 CAGE1Q8TC20 777 aa12.19□□□□□ -0.46
SPTLC2-205ENST00000556607 EMID1Q96A84 441 aaPredicted RBP12.19□□□□□ -0.46
SPTLC2-205ENST00000556607 GTF2IRD1Q9UHL9 959 aa12.19□□□□□ -0.46
SPTLC2-205ENST00000556607 NAP1L2Q9ULW6 460 aaPredicted RBP12.19□□□□□ -0.46
SPTLC2-205ENST00000556607 YBX2Q9Y2T7 364 aaKnown RBP12.19□□□□□ -0.46
SPTLC2-205ENST00000556607 hCG_1642624A0A1W2PR95 340 aa12.18□□□□□ -0.46
SPTLC2-205ENST00000556607 PPFIA4O75335 1185 aa12.18□□□□□ -0.46
SPTLC2-205ENST00000556607 SMARCA1P28370 1054 aa12.18□□□□□ -0.46
SPTLC2-205ENST00000556607 LIFRP42702 1097 aa12.18□□□□□ -0.46
SPTLC2-205ENST00000556607 KCNJ6P48051 423 aa12.18□□□□□ -0.46
SPTLC2-205ENST00000556607 FGD1P98174 961 aa12.18□□□□□ -0.46
SPTLC2-205ENST00000556607 SP4Q02446 784 aa12.18□□□□□ -0.46
SPTLC2-205ENST00000556607 CCDC85BQ15834 202 aaPredicted RBP12.18□□□□□ -0.46
SPTLC2-205ENST00000556607 LRRC8DQ7L1W4 858 aa12.18□□□□□ -0.46
SPTLC2-205ENST00000556607 CYFIP1Q7L576 1253 aa12.18□□□□□ -0.46
SPTLC2-205ENST00000556607 NLRX1Q86UT6 975 aa12.18□□□□□ -0.46
SPTLC2-205ENST00000556607 SESTD1Q86VW0 696 aa12.18□□□□□ -0.46
SPTLC2-205ENST00000556607 FANCBQ8NB91 859 aa12.18□□□□□ -0.46
SPTLC2-205ENST00000556607 AFAP1L1Q8TED9 768 aa12.18□□□□□ -0.46
SPTLC2-205ENST00000556607 NEK1Q96PY6 1258 aa12.18□□□□□ -0.46
SPTLC2-205ENST00000556607 PCDHA11Q9Y5I1 949 aa12.18□□□□□ -0.46
SPTLC2-205ENST00000556607 KIF28PB7ZC32 967 aa12.17□□□□□ -0.46
SPTLC2-205ENST00000556607 FIBPO43427 364 aa12.17□□□□□ -0.46
SPTLC2-205ENST00000556607 STAM2O75886 525 aa12.17□□□□□ -0.46
SPTLC2-205ENST00000556607 F2P00734 622 aa12.17□□□□□ -0.46
SPTLC2-205ENST00000556607 CKBP12277 381 aa12.17□□□□□ -0.46
SPTLC2-205ENST00000556607 SELPP16109 830 aa12.17□□□□□ -0.46
SPTLC2-205ENST00000556607 MRPS9P82933 396 aaKnown RBP12.17□□□□□ -0.46
SPTLC2-205ENST00000556607 ZNF200P98182 395 aaPredicted RBP12.17□□□□□ -0.46
SPTLC2-205ENST00000556607 PTK7Q13308 1070 aa12.17□□□□□ -0.46
SPTLC2-205ENST00000556607 NEDD9Q14511 834 aa12.17□□□□□ -0.46
SPTLC2-205ENST00000556607 UTP14CQ5TAP6 766 aaKnown RBP12.17□□□□□ -0.46
SPTLC2-205ENST00000556607 HEATR3Q7Z4Q2 680 aa12.17□□□□□ -0.46
SPTLC2-205ENST00000556607 MICALL1Q8N3F8 863 aa12.17□□□□□ -0.46
SPTLC2-205ENST00000556607 CCDC136Q96JN2 1154 aa12.17□□□□□ -0.46
SPTLC2-205ENST00000556607 TCEANC2Q96MN5 208 aa12.17□□□□□ -0.46
SPTLC2-205ENST00000556607 SLC9A7Q96T83 725 aa12.17□□□□□ -0.46
SPTLC2-205ENST00000556607 ZBED2Q9BTP6 218 aa12.17□□□□□ -0.46
SPTLC2-205ENST00000556607 PSTPIP2Q9H939 334 aa12.17□□□□□ -0.46
SPTLC2-205ENST00000556607 C17orf102A2RUQ5 167 aa12.16□□□□□ -0.46
SPTLC2-205ENST00000556607 SPDYE3A6NKU9 549 aa12.16□□□□□ -0.46
SPTLC2-205ENST00000556607 H3BRB1 525 aa12.16□□□□□ -0.46
SPTLC2-205ENST00000556607 HAS3O00219 553 aa12.16□□□□□ -0.46
SPTLC2-205ENST00000556607 MEIS2O14770 477 aa12.16□□□□□ -0.46
SPTLC2-205ENST00000556607 CDC45O75419 566 aa12.16□□□□□ -0.46
SPTLC2-205ENST00000556607 COL9A3Q14050 684 aaPredicted RBP12.16□□□□□ -0.46
SPTLC2-205ENST00000556607 PCNX4Q63HM2 1172 aa12.16□□□□□ -0.46
SPTLC2-205ENST00000556607 DHX38Q92620 1227 aaKnown RBP12.16□□□□□ -0.46
SPTLC2-205ENST00000556607 ATP6V0A1Q93050 837 aa12.16□□□□□ -0.46
SPTLC2-205ENST00000556607 VWCEQ96DN2 955 aa12.16□□□□□ -0.46
SPTLC2-205ENST00000556607 COL25A1Q9BXS0 654 aaPredicted RBP12.16□□□□□ -0.46
SPTLC2-205ENST00000556607 TUT1Q9H6E5 874 aaKnown RBP12.16□□□□□ -0.46
SPTLC2-205ENST00000556607 BCAS3Q9H6U6 928 aa12.16□□□□□ -0.46
SPTLC2-205ENST00000556607 CERS4Q9HA82 394 aa12.16□□□□□ -0.46
SPTLC2-205ENST00000556607 KAT6AQ92794 2004 aa12.15□□□□□ -0.46
SPTLC2-205ENST00000556607 PIK3CDO00329 1044 aa12.15□□□□□ -0.46
SPTLC2-205ENST00000556607 BAIAP3O94812 1187 aa12.15□□□□□ -0.46
SPTLC2-205ENST00000556607 PARNO95453 639 aaKnown RBP12.15□□□□□ -0.46
SPTLC2-205ENST00000556607 LGALS2P05162 132 aa12.15□□□□□ -0.46
SPTLC2-205ENST00000556607 CA3P07451 260 aa12.15□□□□□ -0.46
SPTLC2-205ENST00000556607 THPOP40225 353 aa12.15□□□□□ -0.46
SPTLC2-205ENST00000556607 KRT32Q14532 448 aa12.15□□□□□ -0.46
SPTLC2-205ENST00000556607 UBE2SQ16763 222 aa12.15□□□□□ -0.46
SPTLC2-205ENST00000556607 ZNF618Q5T7W0 954 aa12.15□□□□□ -0.46
SPTLC2-205ENST00000556607 CNKSR3Q6P9H4 555 aa12.15□□□□□ -0.46
SPTLC2-205ENST00000556607 PHOSPHO2Q8TCD6 241 aa12.15□□□□□ -0.46
SPTLC2-205ENST00000556607 INPP4AQ96PE3 977 aaPredicted RBP12.15□□□□□ -0.46
SPTLC2-205ENST00000556607 CTAGE1Q96RT6 745 aa12.15□□□□□ -0.46
SPTLC2-205ENST00000556607 C16orf70Q9BSU1 422 aa12.15□□□□□ -0.46
SPTLC2-205ENST00000556607 USP26Q9BXU7 913 aa12.15□□□□□ -0.46
SPTLC2-205ENST00000556607 EHMT1Q9H9B1 1298 aa12.15□□□□□ -0.46
SPTLC2-205ENST00000556607 RBM28Q9NW13 759 aaKnown RBP12.15□□□□□ -0.46
SPTLC2-205ENST00000556607 PKD2L1Q9P0L9 805 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 209.8 ms