RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 E7EWF7 191 aa15.43■□□□□ 0.06
TGFB3-204ENST00000556285 BMP1P13497 986 aa15.43■□□□□ 0.06
TGFB3-204ENST00000556285 RFC2P35250 354 aa15.43■□□□□ 0.06
TGFB3-204ENST00000556285 PSEN2P49810 448 aa15.43■□□□□ 0.06
TGFB3-204ENST00000556285 MRPS5P82675 430 aaKnown RBP15.43■□□□□ 0.06
TGFB3-204ENST00000556285 TAP1Q03518 808 aa15.43■□□□□ 0.06
TGFB3-204ENST00000556285 TRDNQ13061 729 aa15.43■□□□□ 0.06
TGFB3-204ENST00000556285 BFSP2Q13515 415 aa15.43■□□□□ 0.06
TGFB3-204ENST00000556285 PGM5Q15124 567 aa15.43■□□□□ 0.06
TGFB3-204ENST00000556285 DGKDQ16760 1214 aa15.43■□□□□ 0.06
TGFB3-204ENST00000556285 VSIG10LQ86VR7 867 aa15.43■□□□□ 0.06
TGFB3-204ENST00000556285 DHX37Q8IY37 1157 aaKnown RBP15.43■□□□□ 0.06
TGFB3-204ENST00000556285 PIBF1Q8WXW3 757 aa15.43■□□□□ 0.06
TGFB3-204ENST00000556285 EMID1Q96A84 441 aaPredicted RBP15.43■□□□□ 0.06
TGFB3-204ENST00000556285 UHRF1Q96T88 793 aaPredicted RBP15.43■□□□□ 0.06
TGFB3-204ENST00000556285 RIOX1Q9H6W3 641 aa15.43■□□□□ 0.06
TGFB3-204ENST00000556285 GTF2IRD1Q9UHL9 959 aa15.43■□□□□ 0.06
TGFB3-204ENST00000556285 U3KPZ7 1027 aaPredicted RBP15.43■□□□□ 0.06
TGFB3-204ENST00000556285 NLRC5Q86WI3 1866 aa15.42■□□□□ 0.06
TGFB3-204ENST00000556285 HAS3O00219 553 aa15.42■□□□□ 0.06
TGFB3-204ENST00000556285 SGSM2O43147 1006 aa15.42■□□□□ 0.06
TGFB3-204ENST00000556285 LPXNO60711 386 aa15.42■□□□□ 0.06
TGFB3-204ENST00000556285 ACTN1P12814 892 aa15.42■□□□□ 0.06
TGFB3-204ENST00000556285 DEFB103AP81534 67 aa15.42■□□□□ 0.06
TGFB3-204ENST00000556285 TROAPQ12815 778 aa15.42■□□□□ 0.06
TGFB3-204ENST00000556285 LAMC2Q13753 1193 aa15.42■□□□□ 0.06
TGFB3-204ENST00000556285 COL9A3Q14050 684 aaPredicted RBP15.42■□□□□ 0.06
TGFB3-204ENST00000556285 MFSD10Q14728 455 aa15.42■□□□□ 0.06
TGFB3-204ENST00000556285 TMEM67Q5HYA8 995 aa15.42■□□□□ 0.06
TGFB3-204ENST00000556285 MYSM1Q5VVJ2 828 aa15.42■□□□□ 0.06
TGFB3-204ENST00000556285 FCHSD1Q86WN1 690 aa15.42■□□□□ 0.06
TGFB3-204ENST00000556285 HERC6Q8IVU3 1022 aa15.42■□□□□ 0.06
TGFB3-204ENST00000556285 PPTC7Q8NI37 304 aa15.42■□□□□ 0.06
TGFB3-204ENST00000556285 RUFY2Q8WXA3 655 aa15.42■□□□□ 0.06
TGFB3-204ENST00000556285 NCOR1O75376 2440 aa15.42■□□□□ 0.06
TGFB3-204ENST00000556285 NBNO60934 754 aa15.41■□□□□ 0.06
TGFB3-204ENST00000556285 GGPS1O95749 300 aa15.41■□□□□ 0.06
TGFB3-204ENST00000556285 F2P00734 622 aa15.41■□□□□ 0.06
TGFB3-204ENST00000556285 SELPP16109 830 aa15.41■□□□□ 0.06
TGFB3-204ENST00000556285 WTAPQ15007 396 aa15.41■□□□□ 0.06
TGFB3-204ENST00000556285 KIAA0753Q2KHM9 967 aa15.41■□□□□ 0.06
TGFB3-204ENST00000556285 TRIM71Q2Q1W2 868 aaKnown RBP15.41■□□□□ 0.06
TGFB3-204ENST00000556285 HSDL1Q3SXM5 330 aa15.41■□□□□ 0.06
TGFB3-204ENST00000556285 CELF3Q5SZQ8 465 aaKnown RBP15.41■□□□□ 0.06
TGFB3-204ENST00000556285 LRRC8DQ7L1W4 858 aa15.41■□□□□ 0.06
TGFB3-204ENST00000556285 C7orf31Q8N865 590 aa15.41■□□□□ 0.06
TGFB3-204ENST00000556285 IGDCC4Q8TDY8 1250 aa15.41■□□□□ 0.06
TGFB3-204ENST00000556285 SLC9A7Q96T83 725 aa15.41■□□□□ 0.06
TGFB3-204ENST00000556285 MYL10Q9BUA6 226 aa15.41■□□□□ 0.06
TGFB3-204ENST00000556285 BDP1A6H8Y1 2624 aa15.41■□□□□ 0.06
TGFB3-204ENST00000556285 BRWD1Q9NSI6 2320 aa15.4■□□□□ 0.06
TGFB3-204ENST00000556285 PNMA6FA0A0J9YX94 578 aa15.4■□□□□ 0.06
TGFB3-204ENST00000556285 GCOM1H8Y6P7 765 aaPredicted RBP15.4■□□□□ 0.06
TGFB3-204ENST00000556285 POLR2MP0CAP2 368 aa15.4■□□□□ 0.06
TGFB3-204ENST00000556285 CKBP12277 381 aa15.4■□□□□ 0.06
TGFB3-204ENST00000556285 HOXD8P13378 290 aaPredicted RBP15.4■□□□□ 0.06
TGFB3-204ENST00000556285 UBA1P22314 1058 aaKnown RBP15.4■□□□□ 0.06
TGFB3-204ENST00000556285 TRAF7Q6Q0C0 670 aa15.4■□□□□ 0.06
TGFB3-204ENST00000556285 RALYLQ86SE5 291 aaKnown RBP15.4■□□□□ 0.06
TGFB3-204ENST00000556285 MB21D2Q8IYB1 491 aaPredicted RBP15.4■□□□□ 0.06
TGFB3-204ENST00000556285 NCOA7Q8NI08 942 aa15.4■□□□□ 0.06
TGFB3-204ENST00000556285 CAGE1Q8TC20 777 aa15.4■□□□□ 0.06
TGFB3-204ENST00000556285 PHOSPHO2Q8TCD6 241 aa15.4■□□□□ 0.06
TGFB3-204ENST00000556285 AFAP1L1Q8TED9 768 aa15.4■□□□□ 0.06
TGFB3-204ENST00000556285 ARNTL2Q8WYA1 636 aa15.4■□□□□ 0.06
TGFB3-204ENST00000556285 SPATA33Q96N06 139 aa15.4■□□□□ 0.06
TGFB3-204ENST00000556285 MAP3K20Q9NYL2 800 aaKnown RBP15.4■□□□□ 0.06
TGFB3-204ENST00000556285 TELO2Q9Y4R8 837 aa15.4■□□□□ 0.06
TGFB3-204ENST00000556285 ERICH2A1L162 156 aa15.39■□□□□ 0.05
TGFB3-204ENST00000556285 POU3F3P20264 500 aaPredicted RBP15.39■□□□□ 0.05
TGFB3-204ENST00000556285 CCND2P30279 289 aa15.39■□□□□ 0.05
TGFB3-204ENST00000556285 WDR5P61964 334 aaKnown RBP15.39■□□□□ 0.05
TGFB3-204ENST00000556285 RBL2Q08999 1139 aa15.39■□□□□ 0.05
TGFB3-204ENST00000556285 GRB10Q13322 594 aa15.39■□□□□ 0.05
TGFB3-204ENST00000556285 MBTPS1Q14703 1052 aa15.39■□□□□ 0.05
TGFB3-204ENST00000556285 CCDC155Q8N6L0 562 aa15.39■□□□□ 0.05
TGFB3-204ENST00000556285 MAP4K1Q92918 833 aa15.39■□□□□ 0.05
TGFB3-204ENST00000556285 KHSRPQ92945 711 aaKnown RBP eCLIP15.39■□□□□ 0.05
TGFB3-204ENST00000556285 C16orf70Q9BSU1 422 aa15.39■□□□□ 0.05
TGFB3-204ENST00000556285 OSBPL7Q9BZF2 842 aa15.39■□□□□ 0.05
TGFB3-204ENST00000556285 RBM8AQ9Y5S9 174 aaKnown RBP15.39■□□□□ 0.05
TGFB3-204ENST00000556285 PPFIA4O75335 1185 aa15.38■□□□□ 0.05
TGFB3-204ENST00000556285 BAIAP3O94812 1187 aa15.38■□□□□ 0.05
TGFB3-204ENST00000556285 CXCL10P02778 98 aa15.38■□□□□ 0.05
TGFB3-204ENST00000556285 MRPS9P82933 396 aaKnown RBP15.38■□□□□ 0.05
TGFB3-204ENST00000556285 SEMA3FQ13275 785 aa15.38■□□□□ 0.05
TGFB3-204ENST00000556285 PTK7Q13308 1070 aa15.38■□□□□ 0.05
TGFB3-204ENST00000556285 ZNF618Q5T7W0 954 aa15.38■□□□□ 0.05
TGFB3-204ENST00000556285 SAMD3Q8N6K7 520 aa15.38■□□□□ 0.05
TGFB3-204ENST00000556285 GDPD5Q8WTR4 605 aa15.38■□□□□ 0.05
TGFB3-204ENST00000556285 KATNAL1Q9BW62 490 aa15.38■□□□□ 0.05
TGFB3-204ENST00000556285 LY9Q9HBG7 655 aa15.38■□□□□ 0.05
TGFB3-204ENST00000556285 RTEL1Q9NZ71 1219 aa15.38■□□□□ 0.05
TGFB3-204ENST00000556285 SKIV2LQ15477 1246 aaKnown RBP15.37■□□□□ 0.05
TGFB3-204ENST00000556285 CNKSR3Q6P9H4 555 aa15.37■□□□□ 0.05
TGFB3-204ENST00000556285 CATIPQ7Z7H3 387 aa15.37■□□□□ 0.05
TGFB3-204ENST00000556285 ZNF654Q8IZM8 581 aa15.37■□□□□ 0.05
TGFB3-204ENST00000556285 TLL1O43897 1013 aa15.36■□□□□ 0.05
TGFB3-204ENST00000556285 KCNJ6P48051 423 aa15.36■□□□□ 0.05
TGFB3-204ENST00000556285 SART3Q15020 963 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms