RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 KCNH7Q9NS40 1196 aa13.04□□□□□ -0.32
GABRB3-210ENST00000556166 DDX41Q9UJV9 622 aaKnown RBP13.04□□□□□ -0.32
GABRB3-210ENST00000556166 TELO2Q9Y4R8 837 aa13.04□□□□□ -0.32
GABRB3-210ENST00000556166 PCDHB6Q9Y5E3 794 aa13.04□□□□□ -0.32
GABRB3-210ENST00000556166 PLXNA1Q9UIW2 1896 aa13.04□□□□□ -0.32
GABRB3-210ENST00000556166 CCNT1O60563 726 aaKnown RBP13.03□□□□□ -0.32
GABRB3-210ENST00000556166 F13A1P00488 732 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 Q4G0T1 1027 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 MYSM1Q5VVJ2 828 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 IQSEC1Q6DN90 963 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 NIPA1Q7RTP0 329 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 BRAPQ7Z569 592 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 PLA2G4DQ86XP0 818 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 C4orf32Q8N8J7 132 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 GPRASP2Q96D09 838 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 ZNF333Q96JL9 665 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 AGO4Q9HCK5 861 aaKnown RBP13.03□□□□□ -0.32
GABRB3-210ENST00000556166 MSH4O15457 936 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 DHX15O43143 795 aaKnown RBP13.03□□□□□ -0.32
GABRB3-210ENST00000556166 TXNP10599 105 aaKnown RBP13.03□□□□□ -0.32
GABRB3-210ENST00000556166 PDIA4P13667 645 aaKnown RBP13.03□□□□□ -0.32
GABRB3-210ENST00000556166 CNGA1P29973 690 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 TRAPPC10P48553 1259 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 IRX5P78411 483 aaPredicted RBP13.03□□□□□ -0.32
GABRB3-210ENST00000556166 ITGB3BPQ13352 177 aaPredicted RBP13.03□□□□□ -0.32
GABRB3-210ENST00000556166 MTMR1Q13613 665 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 TTC38Q5R3I4 469 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 ANO1Q5XXA6 986 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 LHX8Q68G74 356 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 MOXD1Q6UVY6 613 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 SCFD2Q8WU76 684 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 HAS1Q92839 578 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 FTOQ9C0B1 505 aaKnown RBP eCLIP13.03□□□□□ -0.32
GABRB3-210ENST00000556166 TMEM60Q9H2L4 133 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 ZSCAN16Q9H4T2 348 aaPredicted RBP13.03□□□□□ -0.32
GABRB3-210ENST00000556166 DDX25Q9UHL0 483 aaKnown RBP13.03□□□□□ -0.32
GABRB3-210ENST00000556166 FAM184BQ9ULE4 1060 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 GNEQ9Y223 722 aaKnown RBP13.03□□□□□ -0.32
GABRB3-210ENST00000556166 MRVI1Q9Y6F6 885 aa13.03□□□□□ -0.32
GABRB3-210ENST00000556166 MCM3APO60318 1980 aa13.02□□□□□ -0.32
GABRB3-210ENST00000556166 SEPT4O43236 478 aa13.02□□□□□ -0.33
GABRB3-210ENST00000556166 FIBPO43427 364 aa13.02□□□□□ -0.33
GABRB3-210ENST00000556166 SORBS3O60504 671 aa13.02□□□□□ -0.33
GABRB3-210ENST00000556166 CCL5P13501 91 aa13.02□□□□□ -0.33
GABRB3-210ENST00000556166 KCNA2P16389 499 aa13.02□□□□□ -0.33
GABRB3-210ENST00000556166 MCM7P33993 719 aa13.02□□□□□ -0.33
GABRB3-210ENST00000556166 TNFAIP2Q03169 654 aa13.02□□□□□ -0.33
GABRB3-210ENST00000556166 FOXD4L6Q3SYB3 417 aaPredicted RBP13.02□□□□□ -0.33
GABRB3-210ENST00000556166 DUSP28Q4G0W2 176 aa13.02□□□□□ -0.33
GABRB3-210ENST00000556166 FOXD4L3Q6VB84 417 aaPredicted RBP13.02□□□□□ -0.33
GABRB3-210ENST00000556166 NLRX1Q86UT6 975 aa13.02□□□□□ -0.33
GABRB3-210ENST00000556166 POTEDQ86YR6 584 aa13.02□□□□□ -0.33
GABRB3-210ENST00000556166 ETNPPLQ8TBG4 499 aa13.02□□□□□ -0.33
GABRB3-210ENST00000556166 HMX1Q9NP08 348 aaPredicted RBP13.02□□□□□ -0.33
GABRB3-210ENST00000556166 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.02□□□□□ -0.33
GABRB3-210ENST00000556166 PKD2L1Q9P0L9 805 aa13.02□□□□□ -0.33
GABRB3-210ENST00000556166 CLIC4Q9Y696 253 aa13.02□□□□□ -0.33
GABRB3-210ENST00000556166 TGFB3P10600 412 aa13.01□□□□□ -0.33
GABRB3-210ENST00000556166 GCFC2P16383 781 aaKnown RBP13.01□□□□□ -0.33
GABRB3-210ENST00000556166 UBA1P22314 1058 aaKnown RBP13.01□□□□□ -0.33
GABRB3-210ENST00000556166 TTLL4Q14679 1199 aa13.01□□□□□ -0.33
GABRB3-210ENST00000556166 GNPTABQ3T906 1256 aa13.01□□□□□ -0.33
GABRB3-210ENST00000556166 RILPL1Q5EBL4 403 aa13.01□□□□□ -0.33
GABRB3-210ENST00000556166 SLC5A5Q92911 643 aa13.01□□□□□ -0.33
GABRB3-210ENST00000556166 MTMR9Q96QG7 549 aa13.01□□□□□ -0.33
GABRB3-210ENST00000556166 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.01□□□□□ -0.33
GABRB3-210ENST00000556166 KCNMB3Q9NPA1 279 aa13.01□□□□□ -0.33
GABRB3-210ENST00000556166 PAK6Q9NQU5 681 aaPredicted RBP13.01□□□□□ -0.33
GABRB3-210ENST00000556166 TFIP11Q9UBB9 837 aaKnown RBP13.01□□□□□ -0.33
GABRB3-210ENST00000556166 NOL7Q9UMY1 257 aaKnown RBP13.01□□□□□ -0.33
GABRB3-210ENST00000556166 MYH7BA7E2Y1 1941 aa13□□□□□ -0.33
GABRB3-210ENST00000556166 LRRC37A2A6NM11 1700 aa13□□□□□ -0.33
GABRB3-210ENST00000556166 IPO5O00410 1097 aaKnown RBP13□□□□□ -0.33
GABRB3-210ENST00000556166 CTAGE5O15320 804 aa13□□□□□ -0.33
GABRB3-210ENST00000556166 MAFGO15525 162 aa13□□□□□ -0.33
GABRB3-210ENST00000556166 AKR1A1P14550 325 aa13□□□□□ -0.33
GABRB3-210ENST00000556166 ARHGAP1Q07960 439 aa13□□□□□ -0.33
GABRB3-210ENST00000556166 CELF3Q5SZQ8 465 aaKnown RBP13□□□□□ -0.33
GABRB3-210ENST00000556166 USP28Q96RU2 1077 aa13□□□□□ -0.33
GABRB3-210ENST00000556166 SENP7Q9BQF6 1050 aa13□□□□□ -0.33
GABRB3-210ENST00000556166 ZNF577Q9BSK1 485 aa13□□□□□ -0.33
GABRB3-210ENST00000556166 RNF208Q9H0X6 261 aa13□□□□□ -0.33
GABRB3-210ENST00000556166 DDX20Q9UHI6 824 aaKnown RBP13□□□□□ -0.33
GABRB3-210ENST00000556166 CIZ1Q9ULV3 898 aaPredicted RBP13□□□□□ -0.33
GABRB3-210ENST00000556166 DYNC1LI2O43237 492 aaPredicted RBP12.99□□□□□ -0.33
GABRB3-210ENST00000556166 DUSP11O75319 330 aaKnown RBP12.99□□□□□ -0.33
GABRB3-210ENST00000556166 PSMD10O75832 226 aa12.99□□□□□ -0.33
GABRB3-210ENST00000556166 NUCB2P80303 420 aa12.99□□□□□ -0.33
GABRB3-210ENST00000556166 PTGDRQ13258 359 aa12.99□□□□□ -0.33
GABRB3-210ENST00000556166 PTPAQ15257 358 aa12.99□□□□□ -0.33
GABRB3-210ENST00000556166 IL17AQ16552 155 aa12.99□□□□□ -0.33
GABRB3-210ENST00000556166 KCNV1Q6PIU1 500 aa12.99□□□□□ -0.33
GABRB3-210ENST00000556166 CYFIP1Q7L576 1253 aa12.99□□□□□ -0.33
GABRB3-210ENST00000556166 CDHR1Q96JP9 859 aa12.99□□□□□ -0.33
GABRB3-210ENST00000556166 NAP1L4Q99733 375 aaKnown RBP12.99□□□□□ -0.33
GABRB3-210ENST00000556166 MYADML2A6NDP7 307 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 NEMFO60524 1076 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 FARP2O94887 1054 aaPredicted RBP12.98□□□□□ -0.33
GABRB3-210ENST00000556166 GGPS1O95749 300 aa12.98□□□□□ -0.33
GABRB3-210ENST00000556166 CCNE2O96020 404 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms