RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 MYSM1Q5VVJ2 828 aa22.84■■□□□ 1.25
PRKCH-219ENST00000555906 LRRC8DQ7L1W4 858 aa22.84■■□□□ 1.25
PRKCH-219ENST00000555906 IGDCC4Q8TDY8 1250 aa22.84■■□□□ 1.25
PRKCH-219ENST00000555906 MAP3K14Q99558 947 aa22.84■■□□□ 1.25
PRKCH-219ENST00000555906 MTA3Q9BTC8 594 aa22.84■■□□□ 1.25
PRKCH-219ENST00000555906 FTOQ9C0B1 505 aaKnown RBP eCLIP22.84■■□□□ 1.25
PRKCH-219ENST00000555906 HDAC6Q9UBN7 1215 aa22.84■■□□□ 1.25
PRKCH-219ENST00000555906 REV3LO60673 3130 aa22.84■■□□□ 1.25
PRKCH-219ENST00000555906 DDAH1O94760 285 aa22.83■■□□□ 1.25
PRKCH-219ENST00000555906 GGPS1O95749 300 aa22.83■■□□□ 1.25
PRKCH-219ENST00000555906 KIAA0753Q2KHM9 967 aa22.83■■□□□ 1.25
PRKCH-219ENST00000555906 TJAP1Q5JTD0 557 aa22.83■■□□□ 1.25
PRKCH-219ENST00000555906 ALG1Q9BT22 464 aa22.83■■□□□ 1.25
PRKCH-219ENST00000555906 SPZ1Q9BXG8 430 aa22.83■■□□□ 1.25
PRKCH-219ENST00000555906 LY9Q9HBG7 655 aa22.83■■□□□ 1.25
PRKCH-219ENST00000555906 CA3P07451 260 aa22.82■■□□□ 1.24
PRKCH-219ENST00000555906 IGFBP4P22692 258 aa22.82■■□□□ 1.24
PRKCH-219ENST00000555906 HSDL1Q3SXM5 330 aa22.82■■□□□ 1.24
PRKCH-219ENST00000555906 FCHSD1Q86WN1 690 aa22.82■■□□□ 1.24
PRKCH-219ENST00000555906 ZNF654Q8IZM8 581 aa22.82■■□□□ 1.24
PRKCH-219ENST00000555906 CTCFLQ8NI51 663 aaPredicted RBP22.82■■□□□ 1.24
PRKCH-219ENST00000555906 SPATA33Q96N06 139 aa22.82■■□□□ 1.24
PRKCH-219ENST00000555906 THEGQ9P2T0 379 aa22.82■■□□□ 1.24
PRKCH-219ENST00000555906 PPFIA4O75335 1185 aa22.81■■□□□ 1.24
PRKCH-219ENST00000555906 STAM2O75886 525 aa22.81■■□□□ 1.24
PRKCH-219ENST00000555906 CXCL10P02778 98 aa22.81■■□□□ 1.24
PRKCH-219ENST00000555906 CKBP12277 381 aa22.81■■□□□ 1.24
PRKCH-219ENST00000555906 KIF5BP33176 963 aa22.81■■□□□ 1.24
PRKCH-219ENST00000555906 PTK7Q13308 1070 aa22.81■■□□□ 1.24
PRKCH-219ENST00000555906 HERC6Q8IVU3 1022 aa22.81■■□□□ 1.24
PRKCH-219ENST00000555906 PPM1EQ8WY54 764 aa22.81■■□□□ 1.24
PRKCH-219ENST00000555906 PRDM6Q9NQX0 595 aa22.81■■□□□ 1.24
PRKCH-219ENST00000555906 MICAL3Q7RTP6 2002 aa22.81■■□□□ 1.24
PRKCH-219ENST00000555906 KCNJ6P48051 423 aa22.8■■□□□ 1.24
PRKCH-219ENST00000555906 SP2Q02086 613 aa22.8■■□□□ 1.24
PRKCH-219ENST00000555906 GPNMBQ14956 572 aa22.8■■□□□ 1.24
PRKCH-219ENST00000555906 GNPTABQ3T906 1256 aa22.8■■□□□ 1.24
PRKCH-219ENST00000555906 CNKSR3Q6P9H4 555 aa22.8■■□□□ 1.24
PRKCH-219ENST00000555906 CASC1Q6TDU7 716 aa22.8■■□□□ 1.24
PRKCH-219ENST00000555906 ATXN2LQ8WWM7 1075 aaKnown RBP22.8■■□□□ 1.24
PRKCH-219ENST00000555906 INPP4AQ96PE3 977 aaPredicted RBP22.8■■□□□ 1.24
PRKCH-219ENST00000555906 SMARCA1P28370 1054 aa22.79■■□□□ 1.24
PRKCH-219ENST00000555906 TRIM71Q2Q1W2 868 aaKnown RBP22.79■■□□□ 1.24
PRKCH-219ENST00000555906 GPKOWQ92917 476 aaPredicted RBP eCLIP22.79■■□□□ 1.24
PRKCH-219ENST00000555906 RRP36Q96EU6 259 aaKnown RBP22.79■■□□□ 1.24
PRKCH-219ENST00000555906 C16orf70Q9BSU1 422 aa22.79■■□□□ 1.24
PRKCH-219ENST00000555906 LSG1Q9H089 658 aaKnown RBP22.79■■□□□ 1.24
PRKCH-219ENST00000555906 MLXIPQ9HAP2 919 aa22.79■■□□□ 1.24
PRKCH-219ENST00000555906 PRRC2BQ5JSZ5 2229 aaKnown RBP22.78■■□□□ 1.24
PRKCH-219ENST00000555906 KIF28PB7ZC32 967 aa22.78■■□□□ 1.24
PRKCH-219ENST00000555906 PRC1O43663 620 aa22.78■■□□□ 1.24
PRKCH-219ENST00000555906 SORBS3O60504 671 aa22.78■■□□□ 1.24
PRKCH-219ENST00000555906 NBNO60934 754 aa22.78■■□□□ 1.24
PRKCH-219ENST00000555906 ICAM3P32942 547 aa22.78■■□□□ 1.24
PRKCH-219ENST00000555906 MCM5P33992 734 aa22.78■■□□□ 1.24
PRKCH-219ENST00000555906 WDR5P61964 334 aaKnown RBP22.78■■□□□ 1.24
PRKCH-219ENST00000555906 MRPS9P82933 396 aaKnown RBP22.78■■□□□ 1.24
PRKCH-219ENST00000555906 TMEM87BQ96K49 555 aa22.78■■□□□ 1.24
PRKCH-219ENST00000555906 LZTS2Q9BRK4 669 aa22.78■■□□□ 1.24
PRKCH-219ENST00000555906 MYL10Q9BUA6 226 aa22.78■■□□□ 1.24
PRKCH-219ENST00000555906 SEC63Q9UGP8 760 aaKnown RBP22.78■■□□□ 1.24
PRKCH-219ENST00000555906 XIRP2A4UGR9 3374 aa22.77■■□□□ 1.24
PRKCH-219ENST00000555906 PIK3CDO00329 1044 aa22.77■■□□□ 1.24
PRKCH-219ENST00000555906 SH2B2O14492 632 aaPredicted RBP22.77■■□□□ 1.24
PRKCH-219ENST00000555906 HOXC8P31273 242 aa22.77■■□□□ 1.24
PRKCH-219ENST00000555906 TRAF7Q6Q0C0 670 aa22.77■■□□□ 1.24
PRKCH-219ENST00000555906 PIBF1Q8WXW3 757 aa22.77■■□□□ 1.24
PRKCH-219ENST00000555906 WNT8BQ93098 351 aa22.77■■□□□ 1.24
PRKCH-219ENST00000555906 ZFP91Q96JP5 570 aaPredicted RBP22.77■■□□□ 1.24
PRKCH-219ENST00000555906 SIP14410 1827 aa22.77■■□□□ 1.24
PRKCH-219ENST00000555906 NCOR1O75376 2440 aa22.77■■□□□ 1.24
PRKCH-219ENST00000555906 FIBPO43427 364 aa22.76■■□□□ 1.23
PRKCH-219ENST00000555906 EFCAB14O75071 495 aa22.76■■□□□ 1.23
PRKCH-219ENST00000555906 LGALS2P05162 132 aa22.76■■□□□ 1.23
PRKCH-219ENST00000555906 POU3F3P20264 500 aaPredicted RBP22.76■■□□□ 1.23
PRKCH-219ENST00000555906 GNAQP50148 359 aa22.76■■□□□ 1.23
PRKCH-219ENST00000555906 TAP1Q03518 808 aa22.76■■□□□ 1.23
PRKCH-219ENST00000555906 CCDC85BQ15834 202 aaPredicted RBP22.76■■□□□ 1.23
PRKCH-219ENST00000555906 METTL7BQ6UX53 244 aa22.76■■□□□ 1.23
PRKCH-219ENST00000555906 SERINC5Q86VE9 423 aa22.76■■□□□ 1.23
PRKCH-219ENST00000555906 TMTC2Q8N394 836 aa22.76■■□□□ 1.23
PRKCH-219ENST00000555906 CUL5Q93034 780 aa22.76■■□□□ 1.23
PRKCH-219ENST00000555906 ESYT1Q9BSJ8 1104 aa22.76■■□□□ 1.23
PRKCH-219ENST00000555906 ABHD14A-ACY1A0A1B0GW23 586 aa22.75■■□□□ 1.23
PRKCH-219ENST00000555906 CCDC69A6NI79 296 aa22.75■■□□□ 1.23
PRKCH-219ENST00000555906 NOP56O00567 594 aaKnown RBP22.75■■□□□ 1.23
PRKCH-219ENST00000555906 SLC27A2O14975 620 aa22.75■■□□□ 1.23
PRKCH-219ENST00000555906 TLL1O43897 1013 aa22.75■■□□□ 1.23
PRKCH-219ENST00000555906 ARHGEF15O94989 841 aa22.75■■□□□ 1.23
PRKCH-219ENST00000555906 CALM1P0DP23 149 aa22.75■■□□□ 1.23
PRKCH-219ENST00000555906 CALM2P0DP24 149 aa22.75■■□□□ 1.23
PRKCH-219ENST00000555906 CALM3P0DP25 149 aa22.75■■□□□ 1.23
PRKCH-219ENST00000555906 ZNF200P98182 395 aaPredicted RBP22.75■■□□□ 1.23
PRKCH-219ENST00000555906 SEMA3FQ13275 785 aa22.75■■□□□ 1.23
PRKCH-219ENST00000555906 NEDD9Q14511 834 aa22.75■■□□□ 1.23
PRKCH-219ENST00000555906 HIC1Q14526 733 aa22.75■■□□□ 1.23
PRKCH-219ENST00000555906 ZNF618Q5T7W0 954 aa22.75■■□□□ 1.23
PRKCH-219ENST00000555906 PCNX4Q63HM2 1172 aa22.75■■□□□ 1.23
PRKCH-219ENST00000555906 XRRA1Q6P2D8 792 aa22.75■■□□□ 1.23
PRKCH-219ENST00000555906 NFXL1Q6ZNB6 911 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms