RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 COL4A3BPQ9Y5P4 624 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 DUSP10Q9Y6W6 482 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 NHSQ6T4R5 1651 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 A6NNZ2 444 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 SLC37A4O43826 429 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 NNTQ13423 1086 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 TUBB8Q3ZCM7 444 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 ZCWPW2Q504Y3 356 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 GPATCH4Q5T3I0 446 aaKnown RBP17.9■□□□□ 0.46
TUBB3-209ENST00000555609 CACNA2D4Q7Z3S7 1137 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 TMC4Q7Z404 712 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 SPATA4Q8NEY3 305 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 UBA5Q9GZZ9 404 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 FAM207AQ9NSI2 230 aaPredicted RBP17.9■□□□□ 0.46
TUBB3-209ENST00000555609 LRRC53A6NM62 1247 aa17.89■□□□□ 0.45
TUBB3-209ENST00000555609 EDIL3O43854 480 aa17.89■□□□□ 0.45
TUBB3-209ENST00000555609 TTLL1O95922 423 aa17.89■□□□□ 0.45
TUBB3-209ENST00000555609 SERPING1P05155 500 aa17.89■□□□□ 0.45
TUBB3-209ENST00000555609 SLC9C1Q4G0N8 1177 aa17.89■□□□□ 0.45
TUBB3-209ENST00000555609 MFSD14BQ5SR56 506 aa17.89■□□□□ 0.45
TUBB3-209ENST00000555609 EMBQ6PCB8 327 aa17.89■□□□□ 0.45
TUBB3-209ENST00000555609 SMIM5Q71RC9 77 aa17.89■□□□□ 0.45
TUBB3-209ENST00000555609 CCDC65Q8IXS2 484 aa17.89■□□□□ 0.45
TUBB3-209ENST00000555609 UPF1Q92900 1129 aaKnown RBP eCLIP17.89■□□□□ 0.45
TUBB3-209ENST00000555609 CUL5Q93034 780 aa17.89■□□□□ 0.45
TUBB3-209ENST00000555609 BTAF1O14981 1849 aa17.89■□□□□ 0.45
TUBB3-209ENST00000555609 ZNF185O15231 689 aa17.88■□□□□ 0.45
TUBB3-209ENST00000555609 TDP2O95551 362 aa17.88■□□□□ 0.45
TUBB3-209ENST00000555609 ZNF543Q08ER8 600 aa17.88■□□□□ 0.45
TUBB3-209ENST00000555609 CCDC181Q5TID7 509 aa17.88■□□□□ 0.45
TUBB3-209ENST00000555609 ALS2CLQ60I27 953 aa17.88■□□□□ 0.45
TUBB3-209ENST00000555609 MCTP2Q6DN12 878 aa17.88■□□□□ 0.45
TUBB3-209ENST00000555609 PPP4R3CPQ6ZMV5 832 aa17.88■□□□□ 0.45
TUBB3-209ENST00000555609 DYMQ7RTS9 669 aa17.88■□□□□ 0.45
TUBB3-209ENST00000555609 KRT26Q7Z3Y9 468 aa17.88■□□□□ 0.45
TUBB3-209ENST00000555609 DNAJC19Q96DA6 116 aa17.88■□□□□ 0.45
TUBB3-209ENST00000555609 CAPN6Q9Y6Q1 641 aa17.88■□□□□ 0.45
TUBB3-209ENST00000555609 OPA1O60313 960 aa17.88■□□□□ 0.45
TUBB3-209ENST00000555609 PLEKP08567 350 aaPredicted RBP17.88■□□□□ 0.45
TUBB3-209ENST00000555609 EPHB4P54760 987 aa17.88■□□□□ 0.45
TUBB3-209ENST00000555609 COASYQ13057 564 aa17.88■□□□□ 0.45
TUBB3-209ENST00000555609 FAM26FQ5R3K3 315 aa17.88■□□□□ 0.45
TUBB3-209ENST00000555609 ZC3H3Q8IXZ2 948 aaKnown RBP17.88■□□□□ 0.45
TUBB3-209ENST00000555609 HPS3Q969F9 1004 aa17.88■□□□□ 0.45
TUBB3-209ENST00000555609 MTMR8Q96EF0 704 aa17.88■□□□□ 0.45
TUBB3-209ENST00000555609 DDX25Q9UHL0 483 aaKnown RBP17.88■□□□□ 0.45
TUBB3-209ENST00000555609 STK24Q9Y6E0 443 aa17.88■□□□□ 0.45
TUBB3-209ENST00000555609 GRID2IPA4D2P6 1211 aa17.87■□□□□ 0.45
TUBB3-209ENST00000555609 GOLGA8KD6RF30 607 aa17.87■□□□□ 0.45
TUBB3-209ENST00000555609 EPHB6O15197 1021 aa17.87■□□□□ 0.45
TUBB3-209ENST00000555609 MOCS3O95396 460 aa17.87■□□□□ 0.45
TUBB3-209ENST00000555609 C2orf54Q08AI8 447 aa17.87■□□□□ 0.45
TUBB3-209ENST00000555609 SFMBT2Q5VUG0 894 aa17.87■□□□□ 0.45
TUBB3-209ENST00000555609 GBP6Q6ZN66 633 aa17.87■□□□□ 0.45
TUBB3-209ENST00000555609 FAM196AQ6ZSG2 479 aa17.87■□□□□ 0.45
TUBB3-209ENST00000555609 SRLQ86TD4 932 aa17.87■□□□□ 0.45
TUBB3-209ENST00000555609 CAVIN3Q969G5 261 aa17.87■□□□□ 0.45
TUBB3-209ENST00000555609 COA7Q96BR5 231 aa17.87■□□□□ 0.45
TUBB3-209ENST00000555609 EEF2KMTQ96G04 330 aa17.87■□□□□ 0.45
TUBB3-209ENST00000555609 JMJD4Q9H9V9 463 aa17.87■□□□□ 0.45
TUBB3-209ENST00000555609 PANK4Q9NVE7 773 aa17.87■□□□□ 0.45
TUBB3-209ENST00000555609 FOCADQ5VW36 1801 aa17.87■□□□□ 0.45
TUBB3-209ENST00000555609 GOLGA6BA6NDN3 693 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 SOCS7O14512 581 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 HOXA10P31260 410 aaPredicted RBP17.86■□□□□ 0.45
TUBB3-209ENST00000555609 KCNMA1Q12791 1236 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 CFAP221Q4G0U5 840 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 CCDC40Q4G0X9 1142 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 C10orf76Q5T2E6 689 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 HGSNATQ68CP4 663 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 PRR5LQ6MZQ0 368 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 MOXD1Q6UVY6 613 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 MLXIPQ9HAP2 919 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 FRMPD2Q68DX3 1309 aaPredicted RBP17.86■□□□□ 0.45
TUBB3-209ENST00000555609 PITPNM2Q9BZ72 1349 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 POTEMA6NI47 508 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 SHOX2O60902 331 aaPredicted RBP17.86■□□□□ 0.45
TUBB3-209ENST00000555609 PPFIA4O75335 1185 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 EPB41P11171 864 aaKnown RBP17.86■□□□□ 0.45
TUBB3-209ENST00000555609 USP11P51784 963 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 EDRF1Q3B7T1 1238 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 FAM76AQ8TAV0 307 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 CRAMP1Q96RY5 1269 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 STIM2Q9P246 746 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 PCDHA12Q9UN75 941 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 DAGLAQ9Y4D2 1042 aa17.86■□□□□ 0.45
TUBB3-209ENST00000555609 LY75O60449 1722 aa17.85■□□□□ 0.45
TUBB3-209ENST00000555609 CYP3A7-CYP3A51PA0A087WV96 503 aa17.85■□□□□ 0.45
TUBB3-209ENST00000555609 BTNL10A8MVZ5 291 aa17.85■□□□□ 0.45
TUBB3-209ENST00000555609 TRAF5O00463 557 aa17.85■□□□□ 0.45
TUBB3-209ENST00000555609 ZBTB5O15062 677 aa17.85■□□□□ 0.45
TUBB3-209ENST00000555609 MARCH6O60337 910 aa17.85■□□□□ 0.45
TUBB3-209ENST00000555609 CYP3A7P24462 503 aa17.85■□□□□ 0.45
TUBB3-209ENST00000555609 GGCXP38435 758 aa17.85■□□□□ 0.45
TUBB3-209ENST00000555609 TNNI2P48788 182 aa17.85■□□□□ 0.45
TUBB3-209ENST00000555609 APBA1Q02410 837 aa17.85■□□□□ 0.45
TUBB3-209ENST00000555609 PPFIA1Q13136 1202 aa17.85■□□□□ 0.45
TUBB3-209ENST00000555609 LRRC31Q6UY01 552 aa17.85■□□□□ 0.45
TUBB3-209ENST00000555609 ADGRF4Q8IZF3 695 aa17.85■□□□□ 0.45
TUBB3-209ENST00000555609 HAS1Q92839 578 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms