RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 CSPP1Q1MSJ5 1256 aa11.25□□□□□ -0.61
TMEM253-204ENST00000554844 QRICH1Q2TAL8 776 aa11.25□□□□□ -0.61
TMEM253-204ENST00000554844 TMCO2Q7Z6W1 182 aaPredicted RBP11.25□□□□□ -0.61
TMEM253-204ENST00000554844 ZNF589Q86UQ0 364 aaPredicted RBP11.25□□□□□ -0.61
TMEM253-204ENST00000554844 TBC1D10CQ8IV04 446 aa11.25□□□□□ -0.61
TMEM253-204ENST00000554844 MYOCDQ8IZQ8 938 aa11.25□□□□□ -0.61
TMEM253-204ENST00000554844 DHX38Q92620 1227 aaKnown RBP11.25□□□□□ -0.61
TMEM253-204ENST00000554844 KAT2BQ92831 832 aa11.25□□□□□ -0.61
TMEM253-204ENST00000554844 EMID1Q96A84 441 aaPredicted RBP11.25□□□□□ -0.61
TMEM253-204ENST00000554844 SAMD11Q96NU1 681 aa11.25□□□□□ -0.61
TMEM253-204ENST00000554844 UBAC1Q9BSL1 405 aa11.25□□□□□ -0.61
TMEM253-204ENST00000554844 CPVLQ9H3G5 476 aa11.25□□□□□ -0.61
TMEM253-204ENST00000554844 VAT1LQ9HCJ6 419 aa11.25□□□□□ -0.61
TMEM253-204ENST00000554844 FAM50BQ9Y247 325 aa11.25□□□□□ -0.61
TMEM253-204ENST00000554844 NEDD4P46934 1319 aa11.25□□□□□ -0.61
TMEM253-204ENST00000554844 SALL3Q9BXA9 1300 aa11.25□□□□□ -0.61
TMEM253-204ENST00000554844 KIAA1217Q5T5P2 1943 aa11.25□□□□□ -0.61
TMEM253-204ENST00000554844 FAM86C2PA6NEL3 165 aa11.24□□□□□ -0.61
TMEM253-204ENST00000554844 GPR37L1O60883 481 aa11.24□□□□□ -0.61
TMEM253-204ENST00000554844 KDM4AO75164 1064 aa11.24□□□□□ -0.61
TMEM253-204ENST00000554844 F2P00734 622 aa11.24□□□□□ -0.61
TMEM253-204ENST00000554844 NR3C2P08235 984 aa11.24□□□□□ -0.61
TMEM253-204ENST00000554844 MYCLP12524 364 aaPredicted RBP11.24□□□□□ -0.61
TMEM253-204ENST00000554844 KCNA5P22460 613 aa11.24□□□□□ -0.61
TMEM253-204ENST00000554844 THPOP40225 353 aa11.24□□□□□ -0.61
TMEM253-204ENST00000554844 PUS10Q3MIT2 529 aaKnown RBP11.24□□□□□ -0.61
TMEM253-204ENST00000554844 TIGD5Q53EQ6 642 aa11.24□□□□□ -0.61
TMEM253-204ENST00000554844 ZNF618Q5T7W0 954 aa11.24□□□□□ -0.61
TMEM253-204ENST00000554844 EP400NLQ6ZTU2 488 aa11.24□□□□□ -0.61
TMEM253-204ENST00000554844 SPATA33Q96N06 139 aa11.24□□□□□ -0.61
TMEM253-204ENST00000554844 ZSCAN10Q96SZ4 725 aaPredicted RBP11.24□□□□□ -0.61
TMEM253-204ENST00000554844 AMNQ9BXJ7 453 aa11.24□□□□□ -0.61
TMEM253-204ENST00000554844 SUGCTQ9HAC7 445 aa11.24□□□□□ -0.61
TMEM253-204ENST00000554844 MLXIPQ9HAP2 919 aa11.24□□□□□ -0.61
TMEM253-204ENST00000554844 PXMP2Q9NR77 195 aa11.24□□□□□ -0.61
TMEM253-204ENST00000554844 DIAPH3Q9NSV4 1193 aa11.24□□□□□ -0.61
TMEM253-204ENST00000554844 DDX41Q9UJV9 622 aaKnown RBP11.24□□□□□ -0.61
TMEM253-204ENST00000554844 MYH6P13533 1939 aa11.24□□□□□ -0.61
TMEM253-204ENST00000554844 SIP14410 1827 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 PTPRSQ13332 1948 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 C17orf102A2RUQ5 167 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 RSPH10B2B2RC85 870 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 HIP1O00291 1037 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 NOP56O00567 594 aaKnown RBP11.23□□□□□ -0.61
TMEM253-204ENST00000554844 PPFIA4O75335 1185 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 RSPH10BP0C881 870 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 ALADP13716 330 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 IMMTQ16891 758 aaKnown RBP11.23□□□□□ -0.61
TMEM253-204ENST00000554844 LEXMQ3ZCV2 418 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 SPRED2Q7Z698 418 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 HS6ST3Q8IZP7 471 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 GJD3Q8N144 294 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 SEPT8Q92599 483 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 TBC1D5Q92609 795 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 UIMC1Q96RL1 719 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 YME1L1Q96TA2 773 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 KRT23Q9C075 422 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 CNNM2Q9H8M5 875 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 MAP3K20Q9NYL2 800 aaKnown RBP11.23□□□□□ -0.61
TMEM253-204ENST00000554844 COL20A1Q9P218 1284 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 REV3LO60673 3130 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 XIRP2A4UGR9 3374 aa11.23□□□□□ -0.61
TMEM253-204ENST00000554844 B4E1Z4 1266 aa11.22□□□□□ -0.61
TMEM253-204ENST00000554844 PI4K2BG5E9Z4 385 aa11.22□□□□□ -0.61
TMEM253-204ENST00000554844 SORBS3O60504 671 aa11.22□□□□□ -0.61
TMEM253-204ENST00000554844 GGPS1O95749 300 aa11.22□□□□□ -0.61
TMEM253-204ENST00000554844 GNAT1P11488 350 aa11.22□□□□□ -0.61
TMEM253-204ENST00000554844 CCND2P30279 289 aa11.22□□□□□ -0.61
TMEM253-204ENST00000554844 GNPTABQ3T906 1256 aa11.22□□□□□ -0.61
TMEM253-204ENST00000554844 IFIT1BQ5T764 474 aaKnown RBP11.22□□□□□ -0.61
TMEM253-204ENST00000554844 PTCRAQ6ISU1 281 aaPredicted RBP11.22□□□□□ -0.61
TMEM253-204ENST00000554844 SAMD3Q8N6K7 520 aa11.22□□□□□ -0.61
TMEM253-204ENST00000554844 ATP6V0A1Q93050 837 aa11.22□□□□□ -0.61
TMEM253-204ENST00000554844 RNF25Q96BH1 459 aaPredicted RBP11.22□□□□□ -0.61
TMEM253-204ENST00000554844 MRPL38Q96DV4 380 aaKnown RBP11.22□□□□□ -0.61
TMEM253-204ENST00000554844 CTAGE1Q96RT6 745 aa11.22□□□□□ -0.61
TMEM253-204ENST00000554844 BRWD1Q9NSI6 2320 aa11.21□□□□□ -0.61
TMEM253-204ENST00000554844 MYH7BA7E2Y1 1941 aa11.21□□□□□ -0.61
TMEM253-204ENST00000554844 LAMA4Q16363 1823 aa11.21□□□□□ -0.61
TMEM253-204ENST00000554844 PRR33A8MZF0 331 aa11.21□□□□□ -0.61
TMEM253-204ENST00000554844 HAS3O00219 553 aa11.21□□□□□ -0.61
TMEM253-204ENST00000554844 CAND2O75155 1236 aa11.21□□□□□ -0.61
TMEM253-204ENST00000554844 TGFB3P10600 412 aa11.21□□□□□ -0.61
TMEM253-204ENST00000554844 SDSP20132 328 aa11.21□□□□□ -0.61
TMEM253-204ENST00000554844 HSD17B4P51659 736 aa11.21□□□□□ -0.61
TMEM253-204ENST00000554844 ZNF200P98182 395 aaPredicted RBP11.21□□□□□ -0.61
TMEM253-204ENST00000554844 GPNMBQ14956 572 aa11.21□□□□□ -0.61
TMEM253-204ENST00000554844 TRIM71Q2Q1W2 868 aaKnown RBP11.21□□□□□ -0.61
TMEM253-204ENST00000554844 CELF3Q5SZQ8 465 aaKnown RBP11.21□□□□□ -0.61
TMEM253-204ENST00000554844 CWC27Q6UX04 472 aaKnown RBP11.21□□□□□ -0.61
TMEM253-204ENST00000554844 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.21□□□□□ -0.61
TMEM253-204ENST00000554844 SERINC5Q86VE9 423 aa11.21□□□□□ -0.61
TMEM253-204ENST00000554844 FAM178BQ8IXR5 827 aa11.21□□□□□ -0.61
TMEM253-204ENST00000554844 ENAHQ8N8S7 591 aaPredicted RBP11.21□□□□□ -0.61
TMEM253-204ENST00000554844 DBF4BQ8NFT6 615 aa11.21□□□□□ -0.61
TMEM253-204ENST00000554844 ANKS1AQ92625 1134 aa11.21□□□□□ -0.61
TMEM253-204ENST00000554844 PDCD2LQ9BRP1 358 aa11.21□□□□□ -0.61
TMEM253-204ENST00000554844 C17orf80Q9BSJ5 609 aa11.21□□□□□ -0.61
TMEM253-204ENST00000554844 LNPKQ9C0E8 428 aa11.21□□□□□ -0.61
TMEM253-204ENST00000554844 JMJD4Q9H9V9 463 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms