RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 CCDC103Q8IW40 242 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 IFNL3Q8IZI9 196 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 SMARCC2Q8TAQ2 1214 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.67□□□□□ -1.82
IFT43-208ENST00000554423 FNIP1Q8TF40 1166 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 TOE1Q96GM8 510 aaKnown RBP3.67□□□□□ -1.82
IFT43-208ENST00000554423 PHF20Q9BVI0 1012 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 SMOC1Q9H4F8 434 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 RXFP1Q9HBX9 757 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 NTMQ9P121 344 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 TMEFF2Q9UIK5 374 aaPredicted RBP3.67□□□□□ -1.82
IFT43-208ENST00000554423 ZNF652Q9Y2D9 606 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 PCDHB4Q9Y5E5 795 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 HCFC2Q9Y5Z7 792 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 CCDC163A0A0D9SF12 145 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 CCDC85CA6NKD9 419 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 FAM47E-STBD1D6RA91 191 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 SGSM2O43147 1006 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 FPR2P25090 351 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 GRIA2P42262 883 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 SARSP49591 514 aaKnown RBP3.66□□□□□ -1.82
IFT43-208ENST00000554423 GPR85P60893 370 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 SUMO1P63165 101 aaKnown RBP3.66□□□□□ -1.82
IFT43-208ENST00000554423 SSRP1Q08945 709 aaKnown RBP3.66□□□□□ -1.82
IFT43-208ENST00000554423 KIAA2012Q0VF49 1180 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 PRSS53Q2L4Q9 553 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 LBX2Q6XYB7 198 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 SAPCD2Q86UD0 394 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 MIB1Q86YT6 1006 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 FAM126BQ8IXS8 530 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 ZBTB38Q8NAP3 1195 aaPredicted RBP3.66□□□□□ -1.82
IFT43-208ENST00000554423 KYQ8NBH2 561 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 MKL1Q969V6 931 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 ZBTB8AQ96BR9 441 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 C1orf159Q96HA4 380 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 KCNC2Q96PR1 638 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 WRNIP1Q96S55 665 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 EPB41L4AQ9HCS5 686 aaPredicted RBP3.66□□□□□ -1.82
IFT43-208ENST00000554423 USP40Q9NVE5 1235 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 MSRB2Q9Y3D2 182 aa3.66□□□□□ -1.82
IFT43-208ENST00000554423 TRBV23-1A0A0A0MS06 115 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 SH3D21A4FU49 640 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 TADA3O75528 432 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 GNAT1P11488 350 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 SLURP1P55000 103 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 GJA9P57773 515 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 CYP4F3Q08477 520 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 EMC4Q5J8M3 183 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 DENND5AQ6IQ26 1287 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 STYK1Q6J9G0 422 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 MAMDC2Q7Z304 686 aaPredicted RBP3.65□□□□□ -1.83
IFT43-208ENST00000554423 FRMD5Q7Z6J6 570 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 PRRT2Q7Z6L0 340 aaPredicted RBP3.65□□□□□ -1.83
IFT43-208ENST00000554423 LINC00482Q8N8I6 264 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.65□□□□□ -1.83
IFT43-208ENST00000554423 PTPRN2Q92932 1015 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 OSBP2Q969R2 916 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 CLIC6Q96NY7 704 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 TMEM209Q96SK2 561 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 BCAS3Q9H6U6 928 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 SLC6A20Q9NP91 592 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 ARHGEF4Q9NR80 690 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 FBLN5Q9UBX5 448 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 SIT1Q9Y3P8 196 aa3.65□□□□□ -1.83
IFT43-208ENST00000554423 FFAR3O14843 346 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 TRIM13O60858 407 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 LCP1P13796 627 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 GRK2P25098 689 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 GRK3P35626 688 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 MC3RP41968 323 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 GABREP78334 506 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 HTRA3P83110 453 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 PAK1Q13153 545 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 NFIXQ14938 502 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 NFE2L2Q16236 605 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 VMACQ2NL98 169 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 LIPIQ6XZB0 460 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 NLRP10Q86W26 655 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 NLGN4XQ8N0W4 816 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 CARFQ8N187 725 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 SREK1Q8WXA9 508 aaKnown RBP3.64□□□□□ -1.83
IFT43-208ENST00000554423 DEPDC7Q96QD5 511 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 SRPK1Q96SB4 655 aaKnown RBP3.64□□□□□ -1.83
IFT43-208ENST00000554423 DHRS4Q9BTZ2 278 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 C11orf84Q9BUA3 381 aaPredicted RBP3.64□□□□□ -1.83
IFT43-208ENST00000554423 MYOTQ9UBF9 498 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 PFDN2Q9UHV9 154 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 KDM2BQ8NHM5 1336 aa3.64□□□□□ -1.83
IFT43-208ENST00000554423 OVOL3O00110 214 aa3.63□□□□□ -1.83
IFT43-208ENST00000554423 ARNTLO00327 626 aa3.63□□□□□ -1.83
IFT43-208ENST00000554423 EFCAB14O75071 495 aa3.63□□□□□ -1.83
IFT43-208ENST00000554423 SOD2P04179 222 aa3.63□□□□□ -1.83
IFT43-208ENST00000554423 C8BP07358 591 aa3.63□□□□□ -1.83
IFT43-208ENST00000554423 RPL13P26373 211 aaKnown RBP3.63□□□□□ -1.83
IFT43-208ENST00000554423 ST5P78524 1137 aa3.63□□□□□ -1.83
IFT43-208ENST00000554423 BORAQ6PGQ7 559 aa3.63□□□□□ -1.83
IFT43-208ENST00000554423 OTOP3Q7RTS5 596 aa3.63□□□□□ -1.83
IFT43-208ENST00000554423 MTDHQ86UE4 582 aaKnown RBP3.63□□□□□ -1.83
IFT43-208ENST00000554423 ZSWIM2Q8NEG5 633 aa3.63□□□□□ -1.83
IFT43-208ENST00000554423 TTLL11Q8NHH1 800 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms