RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 AEBP2Q6ZN18 517 aaPredicted RBP16.04■□□□□ 0.16
IFT43-208ENST00000554423 CHIC1Q5VXU3 224 aa15.06■□□□□ 0
IFT43-208ENST00000554423 SENP3Q9H4L4 574 aaPredicted RBP13.86□□□□□ -0.19
IFT43-208ENST00000554423 PHF23Q9BUL5 403 aaPredicted RBP13.57□□□□□ -0.24
IFT43-208ENST00000554423 POTEDQ86YR6 584 aa13.26□□□□□ -0.29
IFT43-208ENST00000554423 FOXD1Q16676 465 aa12.96□□□□□ -0.33
IFT43-208ENST00000554423 MSH5O43196 834 aa12.44□□□□□ -0.42
IFT43-208ENST00000554423 PIAS4Q8N2W9 510 aaPredicted RBP12.01□□□□□ -0.49
IFT43-208ENST00000554423 PPP6R1Q9UPN7 881 aa11.58□□□□□ -0.56
IFT43-208ENST00000554423 ADRA2BP18089 450 aa11.55□□□□□ -0.56
IFT43-208ENST00000554423 PLPPR3Q6T4P5 718 aa11.4□□□□□ -0.58
IFT43-208ENST00000554423 CACNB1Q02641 598 aaPredicted RBP11.12□□□□□ -0.63
IFT43-208ENST00000554423 DMRT2Q9Y5R5 561 aa10.85□□□□□ -0.67
IFT43-208ENST00000554423 MAPK8IP2Q13387 824 aaPredicted RBP10.8□□□□□ -0.68
IFT43-208ENST00000554423 SCAF1Q9H7N4 1312 aaKnown RBP10.62□□□□□ -0.71
IFT43-208ENST00000554423 DCAF8L1A6NGE4 600 aa10.57□□□□□ -0.72
IFT43-208ENST00000554423 RNF39Q9H2S5 420 aa10.51□□□□□ -0.73
IFT43-208ENST00000554423 C1QBPQ07021 282 aaKnown RBP10.34□□□□□ -0.75
IFT43-208ENST00000554423 POTEHQ6S545 545 aa10.28□□□□□ -0.76
IFT43-208ENST00000554423 HOXD11P31277 338 aaPredicted RBP10.16□□□□□ -0.78
IFT43-208ENST00000554423 RNF216Q9NWF9 866 aaPredicted RBP9.94□□□□□ -0.82
IFT43-208ENST00000554423 DNAJC5BQ9UF47 199 aa9.93□□□□□ -0.82
IFT43-208ENST00000554423 PPP4R3CPQ6ZMV5 832 aa9.89□□□□□ -0.83
IFT43-208ENST00000554423 CNKSR2Q8WXI2 1034 aa9.87□□□□□ -0.83
IFT43-208ENST00000554423 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.79□□□□□ -0.84
IFT43-208ENST00000554423 DSG3P32926 999 aa9.62□□□□□ -0.87
IFT43-208ENST00000554423 CAPN15O75808 1086 aa9.6□□□□□ -0.87
IFT43-208ENST00000554423 SPINK5Q9NQ38 1064 aaPredicted RBP9.51□□□□□ -0.89
IFT43-208ENST00000554423 NCBP3Q53F19 620 aaKnown RBP9.49□□□□□ -0.89
IFT43-208ENST00000554423 U3KPZ7 1027 aaPredicted RBP9.42□□□□□ -0.9
IFT43-208ENST00000554423 SP7Q8TDD2 431 aaPredicted RBP9.32□□□□□ -0.92
IFT43-208ENST00000554423 CHRDL2Q6WN34 429 aa9.3□□□□□ -0.92
IFT43-208ENST00000554423 ABCB7O75027 752 aa9.29□□□□□ -0.92
IFT43-208ENST00000554423 TRHP20396 242 aaPredicted RBP9.28□□□□□ -0.92
IFT43-208ENST00000554423 KCNA4P22459 653 aa9.25□□□□□ -0.93
IFT43-208ENST00000554423 RBM42Q9BTD8 480 aaKnown RBP9.25□□□□□ -0.93
IFT43-208ENST00000554423 ZNF219Q9P2Y4 722 aaPredicted RBP9.2□□□□□ -0.94
IFT43-208ENST00000554423 NPM3O75607 178 aaKnown RBP9.19□□□□□ -0.94
IFT43-208ENST00000554423 APLP2Q06481 763 aa9.18□□□□□ -0.94
IFT43-208ENST00000554423 HAX1O00165 279 aa9.01□□□□□ -0.97
IFT43-208ENST00000554423 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9□□□□□ -0.97
IFT43-208ENST00000554423 HNRNPUL2Q1KMD3 747 aaKnown RBP9□□□□□ -0.97
IFT43-208ENST00000554423 PIP4P2Q8N4L2 257 aa8.91□□□□□ -0.98
IFT43-208ENST00000554423 SAMD1Q6SPF0 538 aaPredicted RBP8.9□□□□□ -0.98
IFT43-208ENST00000554423 SLC4A2P04920 1241 aa8.89□□□□□ -0.99
IFT43-208ENST00000554423 SLC4A1APQ9BWU0 796 aaKnown RBP8.87□□□□□ -0.99
IFT43-208ENST00000554423 AKT1S1Q96B36 256 aa8.86□□□□□ -0.99
IFT43-208ENST00000554423 POLA2Q14181 598 aa8.84□□□□□ -0.99
IFT43-208ENST00000554423 PLSCR2Q9NRY7 297 aa8.83□□□□□ -1
IFT43-208ENST00000554423 REM2Q8IYK8 340 aaPredicted RBP8.78□□□□□ -1
IFT43-208ENST00000554423 EVX2Q03828 476 aa8.75□□□□□ -1.01
IFT43-208ENST00000554423 LHX8Q68G74 356 aa8.75□□□□□ -1.01
IFT43-208ENST00000554423 FXR2P51116 673 aaKnown RBP eCLIP8.73□□□□□ -1.01
IFT43-208ENST00000554423 PITPNM1O00562 1244 aa8.69□□□□□ -1.02
IFT43-208ENST00000554423 FOXD4L1Q9NU39 408 aa8.62□□□□□ -1.03
IFT43-208ENST00000554423 ZBTB12Q9Y330 459 aaPredicted RBP8.62□□□□□ -1.03
IFT43-208ENST00000554423 OSCARQ8IYS5 282 aa8.58□□□□□ -1.04
IFT43-208ENST00000554423 MYCNP04198 464 aaPredicted RBP8.57□□□□□ -1.04
IFT43-208ENST00000554423 GABBR2O75899 941 aa8.55□□□□□ -1.04
IFT43-208ENST00000554423 PRKAR2AP13861 404 aaKnown RBP8.49□□□□□ -1.05
IFT43-208ENST00000554423 C19orf67A6NJJ6 358 aa8.48□□□□□ -1.05
IFT43-208ENST00000554423 EHMT2Q96KQ7 1210 aa8.46□□□□□ -1.06
IFT43-208ENST00000554423 ZBTB22O15209 634 aa8.44□□□□□ -1.06
IFT43-208ENST00000554423 ATXN8OSP0DMR3 200 aa8.39□□□□□ -1.07
IFT43-208ENST00000554423 CSRNP3Q8WYN3 585 aa8.38□□□□□ -1.07
IFT43-208ENST00000554423 CLEC11AQ9Y240 323 aa8.38□□□□□ -1.07
IFT43-208ENST00000554423 ATF5Q9Y2D1 282 aaPredicted RBP8.33□□□□□ -1.08
IFT43-208ENST00000554423 SPDYE1Q8NFV5 336 aaPredicted RBP8.32□□□□□ -1.08
IFT43-208ENST00000554423 POTEIP0CG38 1075 aa8.31□□□□□ -1.08
IFT43-208ENST00000554423 POTEMA6NI47 508 aa8.29□□□□□ -1.08
IFT43-208ENST00000554423 SPDYE2BA6NHP3 402 aa8.27□□□□□ -1.09
IFT43-208ENST00000554423 SPDYE6P0CI01 402 aa8.27□□□□□ -1.09
IFT43-208ENST00000554423 SPDYE2Q495Y8 402 aa8.27□□□□□ -1.09
IFT43-208ENST00000554423 CHADLQ6NUI6 762 aa8.24□□□□□ -1.09
IFT43-208ENST00000554423 DCBLD2Q96PD2 775 aa8.24□□□□□ -1.09
IFT43-208ENST00000554423 POTEGQ6S5H5 508 aa8.23□□□□□ -1.09
IFT43-208ENST00000554423 CD44P16070 742 aaKnown RBP8.19□□□□□ -1.1
IFT43-208ENST00000554423 CLCN6P51797 869 aa8.19□□□□□ -1.1
IFT43-208ENST00000554423 PCDH10Q9P2E7 1040 aa8.18□□□□□ -1.1
IFT43-208ENST00000554423 OTUD5Q96G74 571 aa8.17□□□□□ -1.1
IFT43-208ENST00000554423 FBLN2P98095 1184 aa8.14□□□□□ -1.11
IFT43-208ENST00000554423 PRR29P0C7W0 189 aa8.13□□□□□ -1.11
IFT43-208ENST00000554423 ZNF692Q9BU19 519 aaPredicted RBP8.1□□□□□ -1.11
IFT43-208ENST00000554423 SSUH2Q9Y2M2 353 aa8.04□□□□□ -1.12
IFT43-208ENST00000554423 FARP1Q9Y4F1 1045 aaPredicted RBP8.04□□□□□ -1.12
IFT43-208ENST00000554423 POTEB2H3BUK9 544 aa8.03□□□□□ -1.12
IFT43-208ENST00000554423 ZNF579Q8NAF0 562 aaKnown RBP7.98□□□□□ -1.13
IFT43-208ENST00000554423 ZRANB1Q9UGI0 708 aa7.98□□□□□ -1.13
IFT43-208ENST00000554423 GALR2O43603 387 aaPredicted RBP7.95□□□□□ -1.14
IFT43-208ENST00000554423 PABPN1Q86U42 306 aaKnown RBP eCLIP7.95□□□□□ -1.14
IFT43-208ENST00000554423 FAM163AQ96GL9 167 aaPredicted RBP7.94□□□□□ -1.14
IFT43-208ENST00000554423 MKRN4PQ13434 485 aaPredicted RBP7.89□□□□□ -1.15
IFT43-208ENST00000554423 MAMSTRQ6ZN01 415 aa7.87□□□□□ -1.15
IFT43-208ENST00000554423 LCE2DQ5TA82 110 aaPredicted RBP7.85□□□□□ -1.15
IFT43-208ENST00000554423 PELP1Q8IZL8 1130 aaKnown RBP7.83□□□□□ -1.16
IFT43-208ENST00000554423 METRNQ9UJH8 293 aa7.83□□□□□ -1.16
IFT43-208ENST00000554423 PAK3O75914 559 aaPredicted RBP7.81□□□□□ -1.16
IFT43-208ENST00000554423 CDAN1Q8IWY9 1227 aa7.8□□□□□ -1.16
IFT43-208ENST00000554423 SCUBE2Q9NQ36 999 aa7.8□□□□□ -1.16
IFT43-208ENST00000554423 POTEJP0CG39 1038 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms