RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 PPP2R2DQ66LE6 453 aa25.33■■□□□ 1.65
RCCD1-202ENST00000554302 HDAC6Q9UBN7 1215 aa25.33■■□□□ 1.65
RCCD1-202ENST00000554302 RBM8AQ9Y5S9 174 aaKnown RBP25.33■■□□□ 1.65
RCCD1-202ENST00000554302 FRMPD4Q14CM0 1322 aa25.33■■□□□ 1.64
RCCD1-202ENST00000554302 TET1Q8NFU7 2136 aa25.33■■□□□ 1.64
RCCD1-202ENST00000554302 MYH7BA7E2Y1 1941 aa25.32■■□□□ 1.64
RCCD1-202ENST00000554302 BAIAP3O94812 1187 aa25.32■■□□□ 1.64
RCCD1-202ENST00000554302 MFSD10Q14728 455 aa25.32■■□□□ 1.64
RCCD1-202ENST00000554302 HSDL1Q3SXM5 330 aa25.32■■□□□ 1.64
RCCD1-202ENST00000554302 CATIPQ7Z7H3 387 aa25.32■■□□□ 1.64
RCCD1-202ENST00000554302 MTA3Q9BTC8 594 aa25.32■■□□□ 1.64
RCCD1-202ENST00000554302 BAZ2BQ9UIF8 2168 aaKnown RBP25.32■■□□□ 1.64
RCCD1-202ENST00000554302 TRIP12Q14669 1992 aaPredicted RBP25.31■■□□□ 1.64
RCCD1-202ENST00000554302 SELPP16109 830 aa25.31■■□□□ 1.64
RCCD1-202ENST00000554302 CCND2P30279 289 aa25.31■■□□□ 1.64
RCCD1-202ENST00000554302 KIAA0753Q2KHM9 967 aa25.31■■□□□ 1.64
RCCD1-202ENST00000554302 C7orf31Q8N865 590 aa25.31■■□□□ 1.64
RCCD1-202ENST00000554302 FTOQ9C0B1 505 aaKnown RBP eCLIP25.31■■□□□ 1.64
RCCD1-202ENST00000554302 LY9Q9HBG7 655 aa25.31■■□□□ 1.64
RCCD1-202ENST00000554302 PRDM6Q9NQX0 595 aa25.31■■□□□ 1.64
RCCD1-202ENST00000554302 XIRP2A4UGR9 3374 aa25.31■■□□□ 1.64
RCCD1-202ENST00000554302 MYO9BQ13459 2157 aa25.3■■□□□ 1.64
RCCD1-202ENST00000554302 PARNO95453 639 aaKnown RBP25.3■■□□□ 1.64
RCCD1-202ENST00000554302 GGPS1O95749 300 aa25.3■■□□□ 1.64
RCCD1-202ENST00000554302 CXCL10P02778 98 aa25.3■■□□□ 1.64
RCCD1-202ENST00000554302 ZNF286BP0CG31 522 aa25.3■■□□□ 1.64
RCCD1-202ENST00000554302 UBA1P22314 1058 aaKnown RBP25.3■■□□□ 1.64
RCCD1-202ENST00000554302 LRRC8DQ7L1W4 858 aa25.3■■□□□ 1.64
RCCD1-202ENST00000554302 SYMPKQ92797 1274 aaKnown RBP25.3■■□□□ 1.64
RCCD1-202ENST00000554302 ALG1Q9BT22 464 aa25.3■■□□□ 1.64
RCCD1-202ENST00000554302 SPZ1Q9BXG8 430 aa25.3■■□□□ 1.64
RCCD1-202ENST00000554302 CA3P07451 260 aa25.29■■□□□ 1.64
RCCD1-202ENST00000554302 CKBP12277 381 aa25.29■■□□□ 1.64
RCCD1-202ENST00000554302 SMARCA1P28370 1054 aa25.29■■□□□ 1.64
RCCD1-202ENST00000554302 MRPS9P82933 396 aaKnown RBP25.29■■□□□ 1.64
RCCD1-202ENST00000554302 PTK7Q13308 1070 aa25.29■■□□□ 1.64
RCCD1-202ENST00000554302 TRIM71Q2Q1W2 868 aaKnown RBP25.29■■□□□ 1.64
RCCD1-202ENST00000554302 TJAP1Q5JTD0 557 aa25.29■■□□□ 1.64
RCCD1-202ENST00000554302 FCHSD1Q86WN1 690 aa25.29■■□□□ 1.64
RCCD1-202ENST00000554302 HERC6Q8IVU3 1022 aa25.29■■□□□ 1.64
RCCD1-202ENST00000554302 GPKOWQ92917 476 aaPredicted RBP eCLIP25.29■■□□□ 1.64
RCCD1-202ENST00000554302 SPATA33Q96N06 139 aa25.29■■□□□ 1.64
RCCD1-202ENST00000554302 C16orf70Q9BSU1 422 aa25.29■■□□□ 1.64
RCCD1-202ENST00000554302 LSG1Q9H089 658 aaKnown RBP25.29■■□□□ 1.64
RCCD1-202ENST00000554302 DDAH1O94760 285 aa25.28■■□□□ 1.64
RCCD1-202ENST00000554302 IGFBP4P22692 258 aa25.28■■□□□ 1.64
RCCD1-202ENST00000554302 ICAM3P32942 547 aa25.28■■□□□ 1.64
RCCD1-202ENST00000554302 TRAF7Q6Q0C0 670 aa25.28■■□□□ 1.64
RCCD1-202ENST00000554302 ZNF654Q8IZM8 581 aa25.28■■□□□ 1.64
RCCD1-202ENST00000554302 PPM1EQ8WY54 764 aa25.28■■□□□ 1.64
RCCD1-202ENST00000554302 ZFP91Q96JP5 570 aaPredicted RBP25.28■■□□□ 1.64
RCCD1-202ENST00000554302 INPP4AQ96PE3 977 aaPredicted RBP25.28■■□□□ 1.64
RCCD1-202ENST00000554302 TTC28Q96AY4 2481 aa25.28■■□□□ 1.64
RCCD1-202ENST00000554302 PTPRSQ13332 1948 aa25.27■■□□□ 1.64
RCCD1-202ENST00000554302 NBNO60934 754 aa25.27■■□□□ 1.64
RCCD1-202ENST00000554302 STAM2O75886 525 aa25.27■■□□□ 1.64
RCCD1-202ENST00000554302 POU3F3P20264 500 aaPredicted RBP25.27■■□□□ 1.64
RCCD1-202ENST00000554302 HIC1Q14526 733 aa25.27■■□□□ 1.64
RCCD1-202ENST00000554302 ATXN2LQ8WWM7 1075 aaKnown RBP25.27■■□□□ 1.64
RCCD1-202ENST00000554302 WNT8BQ93098 351 aa25.27■■□□□ 1.64
RCCD1-202ENST00000554302 HOXC8P31273 242 aa25.26■■□□□ 1.63
RCCD1-202ENST00000554302 COL9A3Q14050 684 aaPredicted RBP25.26■■□□□ 1.63
RCCD1-202ENST00000554302 MYL10Q9BUA6 226 aa25.26■■□□□ 1.63
RCCD1-202ENST00000554302 BCAS3Q9H6U6 928 aa25.26■■□□□ 1.63
RCCD1-202ENST00000554302 SPATA31C2B4DYI2 1134 aa25.25■■□□□ 1.63
RCCD1-202ENST00000554302 PIK3CDO00329 1044 aa25.25■■□□□ 1.63
RCCD1-202ENST00000554302 SH2B2O14492 632 aaPredicted RBP25.25■■□□□ 1.63
RCCD1-202ENST00000554302 PRC1O43663 620 aa25.25■■□□□ 1.63
RCCD1-202ENST00000554302 SORBS3O60504 671 aa25.25■■□□□ 1.63
RCCD1-202ENST00000554302 KIF5BP33176 963 aa25.25■■□□□ 1.63
RCCD1-202ENST00000554302 WDR5P61964 334 aaKnown RBP25.25■■□□□ 1.63
RCCD1-202ENST00000554302 ZNF200P98182 395 aaPredicted RBP25.25■■□□□ 1.63
RCCD1-202ENST00000554302 TAP1Q03518 808 aa25.25■■□□□ 1.63
RCCD1-202ENST00000554302 CNKSR3Q6P9H4 555 aa25.25■■□□□ 1.63
RCCD1-202ENST00000554302 TMTC2Q8N394 836 aa25.25■■□□□ 1.63
RCCD1-202ENST00000554302 CTCFLQ8NI51 663 aaPredicted RBP25.25■■□□□ 1.63
RCCD1-202ENST00000554302 LZTS2Q9BRK4 669 aa25.25■■□□□ 1.63
RCCD1-202ENST00000554302 MLXIPQ9HAP2 919 aa25.25■■□□□ 1.63
RCCD1-202ENST00000554302 THEGQ9P2T0 379 aa25.25■■□□□ 1.63
RCCD1-202ENST00000554302 MEIS2O14770 477 aa25.24■■□□□ 1.63
RCCD1-202ENST00000554302 ARHGEF15O94989 841 aa25.24■■□□□ 1.63
RCCD1-202ENST00000554302 MCM5P33992 734 aa25.24■■□□□ 1.63
RCCD1-202ENST00000554302 SEMA3FQ13275 785 aa25.24■■□□□ 1.63
RCCD1-202ENST00000554302 MBTPS1Q14703 1052 aa25.24■■□□□ 1.63
RCCD1-202ENST00000554302 NECTIN1Q15223 517 aa25.24■■□□□ 1.63
RCCD1-202ENST00000554302 CCDC85BQ15834 202 aaPredicted RBP25.24■■□□□ 1.63
RCCD1-202ENST00000554302 TCTN1Q2MV58 587 aa25.24■■□□□ 1.63
RCCD1-202ENST00000554302 GNPTABQ3T906 1256 aa25.24■■□□□ 1.63
RCCD1-202ENST00000554302 CASC1Q6TDU7 716 aa25.24■■□□□ 1.63
RCCD1-202ENST00000554302 PIBF1Q8WXW3 757 aa25.24■■□□□ 1.63
RCCD1-202ENST00000554302 RRP36Q96EU6 259 aaKnown RBP25.24■■□□□ 1.63
RCCD1-202ENST00000554302 TMEM87BQ96K49 555 aa25.24■■□□□ 1.63
RCCD1-202ENST00000554302 ESYT1Q9BSJ8 1104 aa25.24■■□□□ 1.63
RCCD1-202ENST00000554302 KIF28PB7ZC32 967 aa25.23■■□□□ 1.63
RCCD1-202ENST00000554302 SLC27A2O14975 620 aa25.23■■□□□ 1.63
RCCD1-202ENST00000554302 LIFRP42702 1097 aa25.23■■□□□ 1.63
RCCD1-202ENST00000554302 KCNJ6P48051 423 aa25.23■■□□□ 1.63
RCCD1-202ENST00000554302 ZNF618Q5T7W0 954 aa25.23■■□□□ 1.63
RCCD1-202ENST00000554302 SERINC5Q86VE9 423 aa25.23■■□□□ 1.63
RCCD1-202ENST00000554302 H3BRB1 525 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms