RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 PPP2R2DQ66LE6 453 aa14.41□□□□□ -0.1
SIX1-202ENST00000553535 KCNV1Q6PIU1 500 aa14.41□□□□□ -0.1
SIX1-202ENST00000553535 HOMER1Q86YM7 354 aa14.41□□□□□ -0.1
SIX1-202ENST00000553535 IGDCC4Q8TDY8 1250 aa14.41□□□□□ -0.1
SIX1-202ENST00000553535 AFAP1L1Q8TED9 768 aa14.41□□□□□ -0.1
SIX1-202ENST00000553535 DHX38Q92620 1227 aaKnown RBP14.41□□□□□ -0.1
SIX1-202ENST00000553535 SYMPKQ92797 1274 aaKnown RBP14.41□□□□□ -0.1
SIX1-202ENST00000553535 FTOQ9C0B1 505 aaKnown RBP eCLIP14.41□□□□□ -0.1
SIX1-202ENST00000553535 HDAC6Q9UBN7 1215 aa14.41□□□□□ -0.1
SIX1-202ENST00000553535 GTF2IRD1Q9UHL9 959 aa14.41□□□□□ -0.1
SIX1-202ENST00000553535 PRRC2BQ5JSZ5 2229 aaKnown RBP14.41□□□□□ -0.1
SIX1-202ENST00000553535 PNMA6FA0A0J9YX94 578 aa14.4□□□□□ -0.1
SIX1-202ENST00000553535 GCOM1H8Y6P7 765 aaPredicted RBP14.4□□□□□ -0.1
SIX1-202ENST00000553535 GALR2O43603 387 aaPredicted RBP14.4□□□□□ -0.1
SIX1-202ENST00000553535 PPFIA4O75335 1185 aa14.4□□□□□ -0.1
SIX1-202ENST00000553535 F2P00734 622 aa14.4□□□□□ -0.1
SIX1-202ENST00000553535 POLR2MP0CAP2 368 aa14.4□□□□□ -0.1
SIX1-202ENST00000553535 IGFBP4P22692 258 aa14.4□□□□□ -0.1
SIX1-202ENST00000553535 ANTXR2P58335 489 aa14.4□□□□□ -0.1
SIX1-202ENST00000553535 SP2Q02086 613 aa14.4□□□□□ -0.1
SIX1-202ENST00000553535 TJAP1Q5JTD0 557 aa14.4□□□□□ -0.1
SIX1-202ENST00000553535 CELF3Q5SZQ8 465 aaKnown RBP14.4□□□□□ -0.1
SIX1-202ENST00000553535 RALYLQ86SE5 291 aaKnown RBP14.4□□□□□ -0.1
SIX1-202ENST00000553535 CCDC155Q8N6L0 562 aa14.4□□□□□ -0.1
SIX1-202ENST00000553535 IL31RAQ8NI17 732 aa14.4□□□□□ -0.1
SIX1-202ENST00000553535 SLC9A7Q96T83 725 aa14.4□□□□□ -0.1
SIX1-202ENST00000553535 MUC3AQ02505 3323 aa14.4□□□□□ -0.1
SIX1-202ENST00000553535 TGFB3P10600 412 aa14.39□□□□□ -0.11
SIX1-202ENST00000553535 SELPP16109 830 aa14.39□□□□□ -0.11
SIX1-202ENST00000553535 IRX6P78412 446 aaPredicted RBP14.39□□□□□ -0.11
SIX1-202ENST00000553535 MFSD10Q14728 455 aa14.39□□□□□ -0.11
SIX1-202ENST00000553535 SART3Q15020 963 aaKnown RBP14.39□□□□□ -0.11
SIX1-202ENST00000553535 CCDC85BQ15834 202 aaPredicted RBP14.39□□□□□ -0.11
SIX1-202ENST00000553535 KIAA0753Q2KHM9 967 aa14.39□□□□□ -0.11
SIX1-202ENST00000553535 MB21D2Q8IYB1 491 aaPredicted RBP14.39□□□□□ -0.11
SIX1-202ENST00000553535 C7orf31Q8N865 590 aa14.39□□□□□ -0.11
SIX1-202ENST00000553535 ALG1Q9BT22 464 aa14.39□□□□□ -0.11
SIX1-202ENST00000553535 KATNAL1Q9BW62 490 aa14.39□□□□□ -0.11
SIX1-202ENST00000553535 PTPRSQ13332 1948 aa14.39□□□□□ -0.11
SIX1-202ENST00000553535 BAIAP3O94812 1187 aa14.39□□□□□ -0.11
SIX1-202ENST00000553535 CA3P07451 260 aa14.39□□□□□ -0.11
SIX1-202ENST00000553535 CKBP12277 381 aa14.39□□□□□ -0.11
SIX1-202ENST00000553535 CCND2P30279 289 aa14.39□□□□□ -0.11
SIX1-202ENST00000553535 HSDL1Q3SXM5 330 aa14.39□□□□□ -0.11
SIX1-202ENST00000553535 CATIPQ7Z7H3 387 aa14.39□□□□□ -0.11
SIX1-202ENST00000553535 FCHSD1Q86WN1 690 aa14.39□□□□□ -0.11
SIX1-202ENST00000553535 HERC6Q8IVU3 1022 aa14.39□□□□□ -0.11
SIX1-202ENST00000553535 ATXN2LQ8WWM7 1075 aaKnown RBP14.39□□□□□ -0.11
SIX1-202ENST00000553535 ZFP91Q96JP5 570 aaPredicted RBP14.39□□□□□ -0.11
SIX1-202ENST00000553535 PARNO95453 639 aaKnown RBP14.38□□□□□ -0.11
SIX1-202ENST00000553535 GGPS1O95749 300 aa14.38□□□□□ -0.11
SIX1-202ENST00000553535 CXCL10P02778 98 aa14.38□□□□□ -0.11
SIX1-202ENST00000553535 ZNF286BP0CG31 522 aa14.38□□□□□ -0.11
SIX1-202ENST00000553535 POU3F3P20264 500 aaPredicted RBP14.38□□□□□ -0.11
SIX1-202ENST00000553535 PTK7Q13308 1070 aa14.38□□□□□ -0.11
SIX1-202ENST00000553535 HIC1Q14526 733 aa14.38□□□□□ -0.11
SIX1-202ENST00000553535 TRIM71Q2Q1W2 868 aaKnown RBP14.38□□□□□ -0.11
SIX1-202ENST00000553535 LRRC8DQ7L1W4 858 aa14.38□□□□□ -0.11
SIX1-202ENST00000553535 GPKOWQ92917 476 aaPredicted RBP eCLIP14.38□□□□□ -0.11
SIX1-202ENST00000553535 SPATA33Q96N06 139 aa14.38□□□□□ -0.11
SIX1-202ENST00000553535 MAP3K14Q99558 947 aa14.38□□□□□ -0.11
SIX1-202ENST00000553535 RBM8AQ9Y5S9 174 aaKnown RBP14.38□□□□□ -0.11
SIX1-202ENST00000553535 RFXAPO00287 272 aa14.37□□□□□ -0.11
SIX1-202ENST00000553535 SORBS3O60504 671 aa14.37□□□□□ -0.11
SIX1-202ENST00000553535 NBNO60934 754 aa14.37□□□□□ -0.11
SIX1-202ENST00000553535 ARHGEF15O94989 841 aa14.37□□□□□ -0.11
SIX1-202ENST00000553535 UBA1P22314 1058 aaKnown RBP14.37□□□□□ -0.11
SIX1-202ENST00000553535 MRPS9P82933 396 aaKnown RBP14.37□□□□□ -0.11
SIX1-202ENST00000553535 ZNF200P98182 395 aaPredicted RBP14.37□□□□□ -0.11
SIX1-202ENST00000553535 TAP1Q03518 808 aa14.37□□□□□ -0.11
SIX1-202ENST00000553535 TRAF7Q6Q0C0 670 aa14.37□□□□□ -0.11
SIX1-202ENST00000553535 POTEGQ6S5H5 508 aa14.37□□□□□ -0.11
SIX1-202ENST00000553535 WNT8BQ93098 351 aa14.37□□□□□ -0.11
SIX1-202ENST00000553535 C16orf70Q9BSU1 422 aa14.37□□□□□ -0.11
SIX1-202ENST00000553535 BCAS3Q9H6U6 928 aa14.37□□□□□ -0.11
SIX1-202ENST00000553535 LY9Q9HBG7 655 aa14.37□□□□□ -0.11
SIX1-202ENST00000553535 THEGQ9P2T0 379 aa14.37□□□□□ -0.11
SIX1-202ENST00000553535 FRMPD4Q14CM0 1322 aa14.36□□□□□ -0.11
SIX1-202ENST00000553535 BDP1A6H8Y1 2624 aa14.36□□□□□ -0.11
SIX1-202ENST00000553535 KIF28PB7ZC32 967 aa14.36□□□□□ -0.11
SIX1-202ENST00000553535 SMARCA1P28370 1054 aa14.36□□□□□ -0.11
SIX1-202ENST00000553535 ICAM3P32942 547 aa14.36□□□□□ -0.11
SIX1-202ENST00000553535 WDR5P61964 334 aaKnown RBP14.36□□□□□ -0.11
SIX1-202ENST00000553535 TCTN1Q2MV58 587 aa14.36□□□□□ -0.11
SIX1-202ENST00000553535 CNKSR3Q6P9H4 555 aa14.36□□□□□ -0.11
SIX1-202ENST00000553535 ASB2Q96Q27 587 aa14.36□□□□□ -0.11
SIX1-202ENST00000553535 MTA3Q9BTC8 594 aa14.36□□□□□ -0.11
SIX1-202ENST00000553535 SPZ1Q9BXG8 430 aa14.36□□□□□ -0.11
SIX1-202ENST00000553535 MLXIPQ9HAP2 919 aa14.36□□□□□ -0.11
SIX1-202ENST00000553535 EPOPA6NHQ4 379 aa14.35□□□□□ -0.11
SIX1-202ENST00000553535 SPATA31C2B4DYI2 1134 aa14.35□□□□□ -0.11
SIX1-202ENST00000553535 STAM2O75886 525 aa14.35□□□□□ -0.11
SIX1-202ENST00000553535 ZNF618Q5T7W0 954 aa14.35□□□□□ -0.11
SIX1-202ENST00000553535 ZNF654Q8IZM8 581 aa14.35□□□□□ -0.11
SIX1-202ENST00000553535 PIBF1Q8WXW3 757 aa14.35□□□□□ -0.11
SIX1-202ENST00000553535 INPP4AQ96PE3 977 aaPredicted RBP14.35□□□□□ -0.11
SIX1-202ENST00000553535 LSG1Q9H089 658 aaKnown RBP14.35□□□□□ -0.11
SIX1-202ENST00000553535 CERS4Q9HA82 394 aa14.35□□□□□ -0.11
SIX1-202ENST00000553535 MTCH2Q9Y6C9 303 aa14.35□□□□□ -0.11
SIX1-202ENST00000553535 DOCK5Q9H7D0 1870 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms