RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 GJB2P29033 226 aa17.29■□□□□ 0.36
SMARCD1-211ENST00000551497 ICAM3P32942 547 aa17.29■□□□□ 0.36
SMARCD1-211ENST00000551497 ZNF76P36508 570 aa17.29■□□□□ 0.36
SMARCD1-211ENST00000551497 NKX3-2P78367 333 aa17.29■□□□□ 0.36
SMARCD1-211ENST00000551497 ARHGAP1Q07960 439 aa17.29■□□□□ 0.36
SMARCD1-211ENST00000551497 KCNA10Q16322 511 aa17.29■□□□□ 0.36
SMARCD1-211ENST00000551497 CCSAPQ6IQ19 270 aaPredicted RBP17.29■□□□□ 0.36
SMARCD1-211ENST00000551497 RNF180Q86T96 592 aa17.29■□□□□ 0.36
SMARCD1-211ENST00000551497 NLRX1Q86UT6 975 aa17.29■□□□□ 0.36
SMARCD1-211ENST00000551497 OR6J1Q8NGC5 347 aa17.29■□□□□ 0.36
SMARCD1-211ENST00000551497 TBCKQ8TEA7 893 aa17.29■□□□□ 0.36
SMARCD1-211ENST00000551497 FERMT2Q96AC1 680 aa17.29■□□□□ 0.36
SMARCD1-211ENST00000551497 UIMC1Q96RL1 719 aa17.29■□□□□ 0.36
SMARCD1-211ENST00000551497 FOXD4L1Q9NU39 408 aa17.29■□□□□ 0.36
SMARCD1-211ENST00000551497 SMC3Q9UQE7 1217 aa17.29■□□□□ 0.36
SMARCD1-211ENST00000551497 FAM86B1E9PN63 330 aa17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 DNM1LO00429 736 aa17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 MEIS1O00470 390 aa17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 NKRFO15226 690 aaKnown RBP eCLIP17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 FIBPO43427 364 aa17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 FAM86B2P0C5J1 330 aa17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 TGFB3P10600 412 aa17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 CAPN2P17655 700 aa17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 KRT2P35908 639 aa17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 FSCN1Q16658 493 aaKnown RBP17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 INF2Q27J81 1249 aa17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 GNPTABQ3T906 1256 aa17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 CEP55Q53EZ4 464 aa17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 KCNV1Q6PIU1 500 aa17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 DIS3L2Q8IYB7 885 aaKnown RBP17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 FBXO18Q8NFZ0 1043 aa17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 TNFRSF25Q93038 417 aa17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 SENP6Q9GZR1 1112 aaPredicted RBP17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 SPC25Q9HBM1 224 aa17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 PKD2L1Q9P0L9 805 aa17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 TELO2Q9Y4R8 837 aa17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 TNRC18O15417 2968 aaPredicted RBP17.28■□□□□ 0.36
SMARCD1-211ENST00000551497 CCDC194A0A1B0GVG4 234 aa17.27■□□□□ 0.36
SMARCD1-211ENST00000551497 KBTBD13C9JR72 458 aa17.27■□□□□ 0.36
SMARCD1-211ENST00000551497 GGPS1O95749 300 aa17.27■□□□□ 0.36
SMARCD1-211ENST00000551497 GH1P01241 217 aa17.27■□□□□ 0.36
SMARCD1-211ENST00000551497 COL6A1P12109 1028 aa17.27■□□□□ 0.36
SMARCD1-211ENST00000551497 UBA1P22314 1058 aaKnown RBP17.27■□□□□ 0.36
SMARCD1-211ENST00000551497 MTMR1Q13613 665 aa17.27■□□□□ 0.36
SMARCD1-211ENST00000551497 NONOQ15233 471 aaKnown RBP eCLIP17.27■□□□□ 0.36
SMARCD1-211ENST00000551497 CELF3Q5SZQ8 465 aaKnown RBP17.27■□□□□ 0.36
SMARCD1-211ENST00000551497 MYSM1Q5VVJ2 828 aa17.27■□□□□ 0.36
SMARCD1-211ENST00000551497 PIK3AP1Q6ZUJ8 805 aa17.27■□□□□ 0.36
SMARCD1-211ENST00000551497 KRT25Q7Z3Z0 450 aa17.27■□□□□ 0.36
SMARCD1-211ENST00000551497 NECAB2Q7Z6G3 386 aa17.27■□□□□ 0.36
SMARCD1-211ENST00000551497 DHX37Q8IY37 1157 aaKnown RBP17.27■□□□□ 0.36
SMARCD1-211ENST00000551497 AFG1LQ8WV93 481 aa17.27■□□□□ 0.36
SMARCD1-211ENST00000551497 GPRASP2Q96D09 838 aa17.27■□□□□ 0.36
SMARCD1-211ENST00000551497 C11orf49Q9H6J7 331 aa17.27■□□□□ 0.36
SMARCD1-211ENST00000551497 KCNH7Q9NS40 1196 aa17.27■□□□□ 0.36
SMARCD1-211ENST00000551497 IGLV3-22A0A075B6J6 115 aa17.26■□□□□ 0.35
SMARCD1-211ENST00000551497 ASGR1P07306 291 aa17.26■□□□□ 0.35
SMARCD1-211ENST00000551497 CST5P28325 142 aaPredicted RBP17.26■□□□□ 0.35
SMARCD1-211ENST00000551497 CIITAP33076 1130 aa17.26■□□□□ 0.35
SMARCD1-211ENST00000551497 USP11P51784 963 aa17.26■□□□□ 0.35
SMARCD1-211ENST00000551497 ACLYP53396 1101 aa17.26■□□□□ 0.35
SMARCD1-211ENST00000551497 PLA2G4DQ86XP0 818 aa17.26■□□□□ 0.35
SMARCD1-211ENST00000551497 TSEN34Q9BSV6 310 aaKnown RBP17.26■□□□□ 0.35
SMARCD1-211ENST00000551497 PHF24Q9UPV7 400 aa17.26■□□□□ 0.35
SMARCD1-211ENST00000551497 KCNA2P16389 499 aa17.25■□□□□ 0.35
SMARCD1-211ENST00000551497 LAMC2Q13753 1193 aa17.25■□□□□ 0.35
SMARCD1-211ENST00000551497 PRR16Q569H4 304 aa17.25■□□□□ 0.35
SMARCD1-211ENST00000551497 CXCL17Q6UXB2 119 aa17.25■□□□□ 0.35
SMARCD1-211ENST00000551497 CYFIP1Q7L576 1253 aa17.25■□□□□ 0.35
SMARCD1-211ENST00000551497 HSCBQ8IWL3 235 aa17.25■□□□□ 0.35
SMARCD1-211ENST00000551497 MLXIPQ9HAP2 919 aa17.25■□□□□ 0.35
SMARCD1-211ENST00000551497 AGO4Q9HCK5 861 aaKnown RBP17.25■□□□□ 0.35
SMARCD1-211ENST00000551497 BRMS1Q9HCU9 246 aa17.25■□□□□ 0.35
SMARCD1-211ENST00000551497 BRCA2P51587 3418 aa17.25■□□□□ 0.35
SMARCD1-211ENST00000551497 DOCK5Q9H7D0 1870 aa17.24■□□□□ 0.35
SMARCD1-211ENST00000551497 A6NJR5 290 aa17.24■□□□□ 0.35
SMARCD1-211ENST00000551497 MAFGO15525 162 aa17.24■□□□□ 0.35
SMARCD1-211ENST00000551497 TDP2O95551 362 aa17.24■□□□□ 0.35
SMARCD1-211ENST00000551497 MYL3P08590 195 aa17.24■□□□□ 0.35
SMARCD1-211ENST00000551497 ATN1P54259 1190 aaPredicted RBP17.24■□□□□ 0.35
SMARCD1-211ENST00000551497 NEDD9Q14511 834 aa17.24■□□□□ 0.35
SMARCD1-211ENST00000551497 SAFBQ15424 915 aaKnown RBP eCLIP17.24■□□□□ 0.35
SMARCD1-211ENST00000551497 HSDL1Q3SXM5 330 aa17.24■□□□□ 0.35
SMARCD1-211ENST00000551497 LARP1BQ659C4 914 aaKnown RBP17.24■□□□□ 0.35
SMARCD1-211ENST00000551497 NIPA1Q7RTP0 329 aa17.24■□□□□ 0.35
SMARCD1-211ENST00000551497 PCSK9Q8NBP7 692 aaKnown RBP17.24■□□□□ 0.35
SMARCD1-211ENST00000551497 EMID1Q96A84 441 aaPredicted RBP17.24■□□□□ 0.35
SMARCD1-211ENST00000551497 LENG9Q96B70 501 aa17.24■□□□□ 0.35
SMARCD1-211ENST00000551497 CDHR1Q96JP9 859 aa17.24■□□□□ 0.35
SMARCD1-211ENST00000551497 SPATA33Q96N06 139 aa17.24■□□□□ 0.35
SMARCD1-211ENST00000551497 SENP7Q9BQF6 1050 aa17.24■□□□□ 0.35
SMARCD1-211ENST00000551497 A0A1W2PQ45 241 aaPredicted RBP17.23■□□□□ 0.35
SMARCD1-211ENST00000551497 A0A1W2PQY0 241 aa17.23■□□□□ 0.35
SMARCD1-211ENST00000551497 KIF28PB7ZC32 967 aa17.23■□□□□ 0.35
SMARCD1-211ENST00000551497 MMP3P08254 477 aa17.23■□□□□ 0.35
SMARCD1-211ENST00000551497 CPT1AP50416 773 aa17.23■□□□□ 0.35
SMARCD1-211ENST00000551497 SP4Q02446 784 aa17.23■□□□□ 0.35
SMARCD1-211ENST00000551497 ITGB3BPQ13352 177 aaPredicted RBP17.23■□□□□ 0.35
SMARCD1-211ENST00000551497 LETM2Q2VYF4 491 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms