RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 LPXNO60711 386 aa20.82■□□□□ 0.92
PRPF40B-215ENST00000551418 GHRHRQ02643 423 aa20.82■□□□□ 0.92
PRPF40B-215ENST00000551418 LAMC2Q13753 1193 aa20.82■□□□□ 0.92
PRPF40B-215ENST00000551418 MBTPS1Q14703 1052 aa20.82■□□□□ 0.92
PRPF40B-215ENST00000551418 SKIV2LQ15477 1246 aaKnown RBP20.82■□□□□ 0.92
PRPF40B-215ENST00000551418 KIAA0753Q2KHM9 967 aa20.82■□□□□ 0.92
PRPF40B-215ENST00000551418 HSDL1Q3SXM5 330 aa20.82■□□□□ 0.92
PRPF40B-215ENST00000551418 STOX1Q6ZVD7 989 aa20.82■□□□□ 0.92
PRPF40B-215ENST00000551418 DHX37Q8IY37 1157 aaKnown RBP20.82■□□□□ 0.92
PRPF40B-215ENST00000551418 C7orf31Q8N865 590 aa20.82■□□□□ 0.92
PRPF40B-215ENST00000551418 PPTC7Q8NI37 304 aa20.82■□□□□ 0.92
PRPF40B-215ENST00000551418 CNNM2Q9H8M5 875 aa20.82■□□□□ 0.92
PRPF40B-215ENST00000551418 XIRP2A4UGR9 3374 aa20.81■□□□□ 0.92
PRPF40B-215ENST00000551418 ZBTB5O15062 677 aa20.81■□□□□ 0.92
PRPF40B-215ENST00000551418 CYTH3O43739 400 aa20.81■□□□□ 0.92
PRPF40B-215ENST00000551418 TLL1O43897 1013 aa20.81■□□□□ 0.92
PRPF40B-215ENST00000551418 BAIAP3O94812 1187 aa20.81■□□□□ 0.92
PRPF40B-215ENST00000551418 F2P00734 622 aa20.81■□□□□ 0.92
PRPF40B-215ENST00000551418 RBL2Q08999 1139 aa20.81■□□□□ 0.92
PRPF40B-215ENST00000551418 GRB10Q13322 594 aa20.81■□□□□ 0.92
PRPF40B-215ENST00000551418 PGM5Q15124 567 aa20.81■□□□□ 0.92
PRPF40B-215ENST00000551418 ZNF618Q5T7W0 954 aa20.81■□□□□ 0.92
PRPF40B-215ENST00000551418 MYSM1Q5VVJ2 828 aa20.81■□□□□ 0.92
PRPF40B-215ENST00000551418 VSIG10LQ86VR7 867 aa20.81■□□□□ 0.92
PRPF40B-215ENST00000551418 HOMER1Q86YM7 354 aa20.81■□□□□ 0.92
PRPF40B-215ENST00000551418 PIGSQ96S52 555 aa20.81■□□□□ 0.92
PRPF40B-215ENST00000551418 COL4A4P53420 1690 aaPredicted RBP20.8■□□□□ 0.92
PRPF40B-215ENST00000551418 KIF28PB7ZC32 967 aa20.8■□□□□ 0.92
PRPF40B-215ENST00000551418 CXCL10P02778 98 aa20.8■□□□□ 0.92
PRPF40B-215ENST00000551418 CYP21A2P08686 494 aa20.8■□□□□ 0.92
PRPF40B-215ENST00000551418 KCNJ6P48051 423 aa20.8■□□□□ 0.92
PRPF40B-215ENST00000551418 CELF3Q5SZQ8 465 aaKnown RBP20.8■□□□□ 0.92
PRPF40B-215ENST00000551418 CCDC155Q8N6L0 562 aa20.8■□□□□ 0.92
PRPF40B-215ENST00000551418 DOCK5Q9H7D0 1870 aa20.79■□□□□ 0.92
PRPF40B-215ENST00000551418 GGPS1O95749 300 aa20.79■□□□□ 0.92
PRPF40B-215ENST00000551418 HOXD8P13378 290 aaPredicted RBP20.79■□□□□ 0.92
PRPF40B-215ENST00000551418 COL9A1P20849 921 aa20.79■□□□□ 0.92
PRPF40B-215ENST00000551418 GRM4Q14833 912 aa20.79■□□□□ 0.92
PRPF40B-215ENST00000551418 TTC22Q5TAA0 569 aa20.79■□□□□ 0.92
PRPF40B-215ENST00000551418 FAM117BQ6P1L5 589 aa20.79■□□□□ 0.92
PRPF40B-215ENST00000551418 CNKSR3Q6P9H4 555 aa20.79■□□□□ 0.92
PRPF40B-215ENST00000551418 FCHSD1Q86WN1 690 aa20.79■□□□□ 0.92
PRPF40B-215ENST00000551418 SPATA33Q96N06 139 aa20.79■□□□□ 0.92
PRPF40B-215ENST00000551418 OSBPL7Q9BZF2 842 aa20.79■□□□□ 0.92
PRPF40B-215ENST00000551418 TSPYL2Q9H2G4 693 aaPredicted RBP20.79■□□□□ 0.92
PRPF40B-215ENST00000551418 RIOX1Q9H6W3 641 aa20.79■□□□□ 0.92
PRPF40B-215ENST00000551418 TELO2Q9Y4R8 837 aa20.79■□□□□ 0.92
PRPF40B-215ENST00000551418 GTPBP6O43824 516 aaPredicted RBP20.78■□□□□ 0.92
PRPF40B-215ENST00000551418 UBA1P22314 1058 aaKnown RBP20.78■□□□□ 0.92
PRPF40B-215ENST00000551418 PTK7Q13308 1070 aa20.78■□□□□ 0.92
PRPF40B-215ENST00000551418 PIBF1Q8WXW3 757 aa20.78■□□□□ 0.92
PRPF40B-215ENST00000551418 C16orf70Q9BSU1 422 aa20.78■□□□□ 0.92
PRPF40B-215ENST00000551418 IFIT3O14879 490 aaKnown RBP20.77■□□□□ 0.92
PRPF40B-215ENST00000551418 PPFIA4O75335 1185 aa20.77■□□□□ 0.92
PRPF40B-215ENST00000551418 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.77■□□□□ 0.92
PRPF40B-215ENST00000551418 IL27Q8NEV9 243 aa20.77■□□□□ 0.92
PRPF40B-215ENST00000551418 GDPD5Q8WTR4 605 aa20.77■□□□□ 0.92
PRPF40B-215ENST00000551418 ZBED2Q9BTP6 218 aa20.77■□□□□ 0.92
PRPF40B-215ENST00000551418 MTUS1Q9ULD2 1270 aa20.77■□□□□ 0.92
PRPF40B-215ENST00000551418 BRWD1Q9NSI6 2320 aa20.76■□□□□ 0.91
PRPF40B-215ENST00000551418 GCOM1H8Y6P7 765 aaPredicted RBP20.76■□□□□ 0.91
PRPF40B-215ENST00000551418 POLR2MP0CAP2 368 aa20.76■□□□□ 0.91
PRPF40B-215ENST00000551418 CHMLP26374 656 aa20.76■□□□□ 0.91
PRPF40B-215ENST00000551418 KATNAL1Q9BW62 490 aa20.76■□□□□ 0.91
PRPF40B-215ENST00000551418 ABHD14A-ACY1A0A1B0GW23 586 aa20.75■□□□□ 0.91
PRPF40B-215ENST00000551418 GJB5O95377 273 aa20.75■□□□□ 0.91
PRPF40B-215ENST00000551418 ANTXR2P58335 489 aa20.75■□□□□ 0.91
PRPF40B-215ENST00000551418 MRPS9P82933 396 aaKnown RBP20.75■□□□□ 0.91
PRPF40B-215ENST00000551418 TROAPQ12815 778 aa20.75■□□□□ 0.91
PRPF40B-215ENST00000551418 SEMA3FQ13275 785 aa20.75■□□□□ 0.91
PRPF40B-215ENST00000551418 SUGCTQ9HAC7 445 aa20.75■□□□□ 0.91
PRPF40B-215ENST00000551418 MAP3K20Q9NYL2 800 aaKnown RBP20.75■□□□□ 0.91
PRPF40B-215ENST00000551418 LINC01553A4QN01 128 aa20.74■□□□□ 0.91
PRPF40B-215ENST00000551418 E7EWF7 191 aa20.74■□□□□ 0.91
PRPF40B-215ENST00000551418 CCND2P30279 289 aa20.74■□□□□ 0.91
PRPF40B-215ENST00000551418 COL9A3Q14050 684 aaPredicted RBP20.74■□□□□ 0.91
PRPF40B-215ENST00000551418 IKBKEQ14164 716 aa20.74■□□□□ 0.91
PRPF40B-215ENST00000551418 SERINC5Q86VE9 423 aa20.74■□□□□ 0.91
PRPF40B-215ENST00000551418 DBF4BQ8NFT6 615 aa20.74■□□□□ 0.91
PRPF40B-215ENST00000551418 RAD9AQ99638 391 aa20.74■□□□□ 0.91
PRPF40B-215ENST00000551418 MLXIPQ9HAP2 919 aa20.74■□□□□ 0.91
PRPF40B-215ENST00000551418 RTEL1Q9NZ71 1219 aa20.74■□□□□ 0.91
PRPF40B-215ENST00000551418 PNMA6FA0A0J9YX94 578 aa20.73■□□□□ 0.91
PRPF40B-215ENST00000551418 TREHO43280 583 aa20.73■□□□□ 0.91
PRPF40B-215ENST00000551418 PARNO95453 639 aaKnown RBP20.73■□□□□ 0.91
PRPF40B-215ENST00000551418 THPOP40225 353 aa20.73■□□□□ 0.91
PRPF40B-215ENST00000551418 TRDNQ13061 729 aa20.73■□□□□ 0.91
PRPF40B-215ENST00000551418 MKRN4PQ13434 485 aaPredicted RBP20.73■□□□□ 0.91
PRPF40B-215ENST00000551418 KCNV1Q6PIU1 500 aa20.73■□□□□ 0.91
PRPF40B-215ENST00000551418 U3KPZ7 1027 aaPredicted RBP20.73■□□□□ 0.91
PRPF40B-215ENST00000551418 MICAL3Q7RTP6 2002 aa20.73■□□□□ 0.91
PRPF40B-215ENST00000551418 H3BRB1 525 aa20.72■□□□□ 0.91
PRPF40B-215ENST00000551418 LGR5O75473 907 aa20.72■□□□□ 0.91
PRPF40B-215ENST00000551418 LGALS2P05162 132 aa20.72■□□□□ 0.91
PRPF40B-215ENST00000551418 SMIM10L2AP0DMW4 78 aa20.72■□□□□ 0.91
PRPF40B-215ENST00000551418 SMIM10L2BP0DMW5 78 aa20.72■□□□□ 0.91
PRPF40B-215ENST00000551418 TGFB3P10600 412 aa20.72■□□□□ 0.91
PRPF40B-215ENST00000551418 ERVK-21P61565 698 aa20.72■□□□□ 0.91
PRPF40B-215ENST00000551418 WTAPQ15007 396 aa20.72■□□□□ 0.91
PRPF40B-215ENST00000551418 AAK1Q2M2I8 961 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms