RNA–Protein interactions for RNA: ENST00000550863.1

CPNE8-207, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-207ENST00000550863 BRDTQ58F21 947 aaPredicted RBP13.28□□□□□ -0.28
CPNE8-207ENST00000550863 CREB3L3Q68CJ9 461 aa13.28□□□□□ -0.28
CPNE8-207ENST00000550863 USP17L6PQ6QN14 398 aa13.28□□□□□ -0.28
CPNE8-207ENST00000550863 CATIPQ7Z7H3 387 aa13.28□□□□□ -0.28
CPNE8-207ENST00000550863 TRIM50Q86XT4 487 aa13.28□□□□□ -0.28
CPNE8-207ENST00000550863 DHX37Q8IY37 1157 aaKnown RBP13.28□□□□□ -0.28
CPNE8-207ENST00000550863 SRBD1Q8N5C6 995 aaKnown RBP13.28□□□□□ -0.28
CPNE8-207ENST00000550863 ANO2Q9NQ90 1003 aa13.28□□□□□ -0.28
CPNE8-207ENST00000550863 GTF2IRD1Q9UHL9 959 aa13.28□□□□□ -0.28
CPNE8-207ENST00000550863 NOD1Q9Y239 953 aa13.28□□□□□ -0.28
CPNE8-207ENST00000550863 WDR81Q562E7 1941 aa13.28□□□□□ -0.28
CPNE8-207ENST00000550863 FRMPD4Q14CM0 1322 aa13.28□□□□□ -0.28
CPNE8-207ENST00000550863 KIAA1671Q9BY89 1806 aa13.27□□□□□ -0.28
CPNE8-207ENST00000550863 GCOM1H8Y6P7 765 aaPredicted RBP13.27□□□□□ -0.29
CPNE8-207ENST00000550863 RFXAPO00287 272 aa13.27□□□□□ -0.29
CPNE8-207ENST00000550863 EIF3JO75822 258 aaKnown RBP13.27□□□□□ -0.29
CPNE8-207ENST00000550863 CA3P07451 260 aa13.27□□□□□ -0.29
CPNE8-207ENST00000550863 SUPT20HL2P0C7V6 817 aa13.27□□□□□ -0.29
CPNE8-207ENST00000550863 POLR2MP0CAP2 368 aa13.27□□□□□ -0.29
CPNE8-207ENST00000550863 ATP2A2P16615 1042 aaKnown RBP13.27□□□□□ -0.29
CPNE8-207ENST00000550863 DEFB103AP81534 67 aa13.27□□□□□ -0.29
CPNE8-207ENST00000550863 SP4Q02446 784 aa13.27□□□□□ -0.29
CPNE8-207ENST00000550863 SART3Q15020 963 aaKnown RBP13.27□□□□□ -0.29
CPNE8-207ENST00000550863 CCDC85BQ15834 202 aaPredicted RBP13.27□□□□□ -0.29
CPNE8-207ENST00000550863 DGKDQ16760 1214 aa13.27□□□□□ -0.29
CPNE8-207ENST00000550863 UBE2SQ16763 222 aa13.27□□□□□ -0.29
CPNE8-207ENST00000550863 MYSM1Q5VVJ2 828 aa13.27□□□□□ -0.29
CPNE8-207ENST00000550863 PPP2R2DQ66LE6 453 aa13.27□□□□□ -0.29
CPNE8-207ENST00000550863 KRT40Q6A162 431 aa13.27□□□□□ -0.29
CPNE8-207ENST00000550863 CCDC82Q8N4S0 544 aa13.27□□□□□ -0.29
CPNE8-207ENST00000550863 PPTC7Q8NI37 304 aa13.27□□□□□ -0.29
CPNE8-207ENST00000550863 EMID1Q96A84 441 aaPredicted RBP13.27□□□□□ -0.29
CPNE8-207ENST00000550863 SPATA33Q96N06 139 aa13.27□□□□□ -0.29
CPNE8-207ENST00000550863 OSBPL7Q9BZF2 842 aa13.27□□□□□ -0.29
CPNE8-207ENST00000550863 RTEL1Q9NZ71 1219 aa13.27□□□□□ -0.29
CPNE8-207ENST00000550863 SLC4A7Q9Y6M7 1214 aa13.27□□□□□ -0.29
CPNE8-207ENST00000550863 HAS3O00219 553 aa13.26□□□□□ -0.29
CPNE8-207ENST00000550863 PITPNM1O00562 1244 aa13.26□□□□□ -0.29
CPNE8-207ENST00000550863 NBNO60934 754 aa13.26□□□□□ -0.29
CPNE8-207ENST00000550863 DDAH1O94760 285 aa13.26□□□□□ -0.29
CPNE8-207ENST00000550863 CASTP20810 708 aaKnown RBP13.26□□□□□ -0.29
CPNE8-207ENST00000550863 CCND2P30279 289 aa13.26□□□□□ -0.29
CPNE8-207ENST00000550863 MBTPS1Q14703 1052 aa13.26□□□□□ -0.29
CPNE8-207ENST00000550863 RAB30Q15771 203 aa13.26□□□□□ -0.29
CPNE8-207ENST00000550863 TRIM71Q2Q1W2 868 aaKnown RBP13.26□□□□□ -0.29
CPNE8-207ENST00000550863 CELF3Q5SZQ8 465 aaKnown RBP13.26□□□□□ -0.29
CPNE8-207ENST00000550863 TRAF7Q6Q0C0 670 aa13.26□□□□□ -0.29
CPNE8-207ENST00000550863 CASC1Q6TDU7 716 aa13.26□□□□□ -0.29
CPNE8-207ENST00000550863 NFXL1Q6ZNB6 911 aa13.26□□□□□ -0.29
CPNE8-207ENST00000550863 VSIG10LQ86VR7 867 aa13.26□□□□□ -0.29
CPNE8-207ENST00000550863 MICU3Q86XE3 530 aa13.26□□□□□ -0.29
CPNE8-207ENST00000550863 MICALL1Q8N3F8 863 aa13.26□□□□□ -0.29
CPNE8-207ENST00000550863 SPZ1Q9BXG8 430 aa13.26□□□□□ -0.29
CPNE8-207ENST00000550863 SEZ6LQ9BYH1 1024 aa13.26□□□□□ -0.29
CPNE8-207ENST00000550863 FTOQ9C0B1 505 aaKnown RBP eCLIP13.26□□□□□ -0.29
CPNE8-207ENST00000550863 BRWD1Q9NSI6 2320 aa13.26□□□□□ -0.29
CPNE8-207ENST00000550863 MSRAQ9UJ68 235 aa13.26□□□□□ -0.29
CPNE8-207ENST00000550863 LCHNA4D1U4 455 aa13.25□□□□□ -0.29
CPNE8-207ENST00000550863 KPNA6O60684 536 aa13.25□□□□□ -0.29
CPNE8-207ENST00000550863 HOXD8P13378 290 aaPredicted RBP13.25□□□□□ -0.29
CPNE8-207ENST00000550863 IGFBP4P22692 258 aa13.25□□□□□ -0.29
CPNE8-207ENST00000550863 PTPN11Q06124 597 aaPredicted RBP13.25□□□□□ -0.29
CPNE8-207ENST00000550863 NECTIN1Q15223 517 aa13.25□□□□□ -0.29
CPNE8-207ENST00000550863 ADCK5Q3MIX3 580 aa13.25□□□□□ -0.29
CPNE8-207ENST00000550863 LRRC8DQ7L1W4 858 aa13.25□□□□□ -0.29
CPNE8-207ENST00000550863 SESTD1Q86VW0 696 aa13.25□□□□□ -0.29
CPNE8-207ENST00000550863 RPUSD2Q8IZ73 545 aaKnown RBP13.25□□□□□ -0.29
CPNE8-207ENST00000550863 C7orf31Q8N865 590 aa13.25□□□□□ -0.29
CPNE8-207ENST00000550863 CTCFLQ8NI51 663 aaPredicted RBP13.25□□□□□ -0.29
CPNE8-207ENST00000550863 GAS2L1Q99501 681 aaPredicted RBP13.25□□□□□ -0.29
CPNE8-207ENST00000550863 C16orf70Q9BSU1 422 aa13.25□□□□□ -0.29
CPNE8-207ENST00000550863 MTIF3Q9H2K0 278 aaKnown RBP13.25□□□□□ -0.29
CPNE8-207ENST00000550863 SLC28A3Q9HAS3 691 aa13.25□□□□□ -0.29
CPNE8-207ENST00000550863 PKD2L1Q9P0L9 805 aa13.25□□□□□ -0.29
CPNE8-207ENST00000550863 CNTNAP5Q8WYK1 1306 aa13.24□□□□□ -0.29
CPNE8-207ENST00000550863 CCDC69A6NI79 296 aa13.24□□□□□ -0.29
CPNE8-207ENST00000550863 MEIS2O14770 477 aa13.24□□□□□ -0.29
CPNE8-207ENST00000550863 LGALS2P05162 132 aa13.24□□□□□ -0.29
CPNE8-207ENST00000550863 CKBP12277 381 aa13.24□□□□□ -0.29
CPNE8-207ENST00000550863 CPA1P15085 419 aa13.24□□□□□ -0.29
CPNE8-207ENST00000550863 MCM5P33992 734 aa13.24□□□□□ -0.29
CPNE8-207ENST00000550863 LAMC2Q13753 1193 aa13.24□□□□□ -0.29
CPNE8-207ENST00000550863 ZNF618Q5T7W0 954 aa13.24□□□□□ -0.29
CPNE8-207ENST00000550863 TYW1BQ6NUM6 668 aa13.24□□□□□ -0.29
CPNE8-207ENST00000550863 CYFIP1Q7L576 1253 aa13.24□□□□□ -0.29
CPNE8-207ENST00000550863 RASEFQ8IZ41 740 aa13.24□□□□□ -0.29
CPNE8-207ENST00000550863 RETREG2Q8NC44 543 aa13.24□□□□□ -0.29
CPNE8-207ENST00000550863 SMARCC2Q8TAQ2 1214 aa13.24□□□□□ -0.29
CPNE8-207ENST00000550863 RRP36Q96EU6 259 aaKnown RBP13.24□□□□□ -0.29
CPNE8-207ENST00000550863 PGBD1Q96JS3 809 aa13.24□□□□□ -0.29
CPNE8-207ENST00000550863 INPP4AQ96PE3 977 aaPredicted RBP13.24□□□□□ -0.29
CPNE8-207ENST00000550863 MAF1Q9H063 256 aa13.24□□□□□ -0.29
CPNE8-207ENST00000550863 PCDHA11Q9Y5I1 949 aa13.24□□□□□ -0.29
CPNE8-207ENST00000550863 PFKMP08237 780 aa13.23□□□□□ -0.29
CPNE8-207ENST00000550863 CTSHP09668 335 aa13.23□□□□□ -0.29
CPNE8-207ENST00000550863 SELPP16109 830 aa13.23□□□□□ -0.29
CPNE8-207ENST00000550863 WDR5P61964 334 aaKnown RBP13.23□□□□□ -0.29
CPNE8-207ENST00000550863 BFSP2Q13515 415 aa13.23□□□□□ -0.29
CPNE8-207ENST00000550863 FAM117BQ6P1L5 589 aa13.23□□□□□ -0.29
CPNE8-207ENST00000550863 TMTC3Q6ZXV5 915 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms