RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 TRIP12Q14669 1992 aaPredicted RBP25.18■■□□□ 1.62
SMARCC2-210ENST00000550519 GTPBP6O43824 516 aaPredicted RBP25.18■■□□□ 1.62
SMARCC2-210ENST00000550519 KCNJ6P48051 423 aa25.18■■□□□ 1.62
SMARCC2-210ENST00000550519 PTH1RQ03431 593 aa25.18■■□□□ 1.62
SMARCC2-210ENST00000550519 TRAF1Q13077 416 aa25.18■■□□□ 1.62
SMARCC2-210ENST00000550519 TRIM71Q2Q1W2 868 aaKnown RBP25.18■■□□□ 1.62
SMARCC2-210ENST00000550519 HSDL1Q3SXM5 330 aa25.18■■□□□ 1.62
SMARCC2-210ENST00000550519 CNKSR3Q6P9H4 555 aa25.18■■□□□ 1.62
SMARCC2-210ENST00000550519 HOMER1Q86YM7 354 aa25.18■■□□□ 1.62
SMARCC2-210ENST00000550519 ARNTL2Q8WYA1 636 aa25.18■■□□□ 1.62
SMARCC2-210ENST00000550519 PIGSQ96S52 555 aa25.18■■□□□ 1.62
SMARCC2-210ENST00000550519 REV3LO60673 3130 aa25.18■■□□□ 1.62
SMARCC2-210ENST00000550519 CYTH3O43739 400 aa25.17■■□□□ 1.62
SMARCC2-210ENST00000550519 TLL1O43897 1013 aa25.17■■□□□ 1.62
SMARCC2-210ENST00000550519 TGFB3P10600 412 aa25.17■■□□□ 1.62
SMARCC2-210ENST00000550519 TRAF7Q6Q0C0 670 aa25.17■■□□□ 1.62
SMARCC2-210ENST00000550519 UHRF1Q96T88 793 aaPredicted RBP25.17■■□□□ 1.62
SMARCC2-210ENST00000550519 SENP2Q9HC62 589 aa25.17■■□□□ 1.62
SMARCC2-210ENST00000550519 GCOM1H8Y6P7 765 aaPredicted RBP25.16■■□□□ 1.62
SMARCC2-210ENST00000550519 IFIT3O14879 490 aaKnown RBP25.16■■□□□ 1.62
SMARCC2-210ENST00000550519 GGPS1O95749 300 aa25.16■■□□□ 1.62
SMARCC2-210ENST00000550519 POLR2MP0CAP2 368 aa25.16■■□□□ 1.62
SMARCC2-210ENST00000550519 CHMLP26374 656 aa25.16■■□□□ 1.62
SMARCC2-210ENST00000550519 SP2Q02086 613 aa25.16■■□□□ 1.62
SMARCC2-210ENST00000550519 TROAPQ12815 778 aa25.16■■□□□ 1.62
SMARCC2-210ENST00000550519 TCTN1Q2MV58 587 aa25.16■■□□□ 1.62
SMARCC2-210ENST00000550519 IL27Q8NEV9 243 aa25.16■■□□□ 1.62
SMARCC2-210ENST00000550519 RUFY2Q8WXA3 655 aa25.16■■□□□ 1.62
SMARCC2-210ENST00000550519 WNT8BQ93098 351 aa25.16■■□□□ 1.62
SMARCC2-210ENST00000550519 SPATA33Q96N06 139 aa25.16■■□□□ 1.62
SMARCC2-210ENST00000550519 BDP1A6H8Y1 2624 aa25.16■■□□□ 1.62
SMARCC2-210ENST00000550519 ABHD14A-ACY1A0A1B0GW23 586 aa25.15■■□□□ 1.62
SMARCC2-210ENST00000550519 BMP1P13497 986 aa25.15■■□□□ 1.62
SMARCC2-210ENST00000550519 UBA1P22314 1058 aaKnown RBP25.15■■□□□ 1.62
SMARCC2-210ENST00000550519 CCND2P30279 289 aa25.15■■□□□ 1.62
SMARCC2-210ENST00000550519 DEFB103AP81534 67 aa25.15■■□□□ 1.62
SMARCC2-210ENST00000550519 ZNF200P98182 395 aaPredicted RBP25.15■■□□□ 1.62
SMARCC2-210ENST00000550519 TFF2Q03403 129 aa25.15■■□□□ 1.62
SMARCC2-210ENST00000550519 HIC1Q14526 733 aa25.15■■□□□ 1.62
SMARCC2-210ENST00000550519 KRT40Q6A162 431 aa25.15■■□□□ 1.62
SMARCC2-210ENST00000550519 SPRED2Q7Z698 418 aa25.15■■□□□ 1.62
SMARCC2-210ENST00000550519 TAF6LQ9Y6J9 622 aa25.15■■□□□ 1.62
SMARCC2-210ENST00000550519 PNMA6FA0A0J9YX94 578 aa25.14■■□□□ 1.62
SMARCC2-210ENST00000550519 ERICH2A1L162 156 aa25.14■■□□□ 1.62
SMARCC2-210ENST00000550519 SORBS3O60504 671 aa25.14■■□□□ 1.62
SMARCC2-210ENST00000550519 SKIV2LQ15477 1246 aaKnown RBP25.14■■□□□ 1.62
SMARCC2-210ENST00000550519 AAK1Q2M2I8 961 aa25.14■■□□□ 1.62
SMARCC2-210ENST00000550519 ZNF618Q5T7W0 954 aa25.14■■□□□ 1.62
SMARCC2-210ENST00000550519 TMCO2Q7Z6W1 182 aaPredicted RBP25.14■■□□□ 1.62
SMARCC2-210ENST00000550519 GPKOWQ92917 476 aaPredicted RBP eCLIP25.14■■□□□ 1.629e-11■■■■■ 33.4
SMARCC2-210ENST00000550519 C16orf70Q9BSU1 422 aa25.14■■□□□ 1.62
SMARCC2-210ENST00000550519 LCHNA4D1U4 455 aa25.13■■□□□ 1.61
SMARCC2-210ENST00000550519 E7EWF7 191 aa25.13■■□□□ 1.61
SMARCC2-210ENST00000550519 LPXNO60711 386 aa25.13■■□□□ 1.61
SMARCC2-210ENST00000550519 GRB10Q13322 594 aa25.13■■□□□ 1.61
SMARCC2-210ENST00000550519 MBTPS1Q14703 1052 aa25.13■■□□□ 1.61
SMARCC2-210ENST00000550519 WTAPQ15007 396 aa25.13■■□□□ 1.61
SMARCC2-210ENST00000550519 RALYLQ86SE5 291 aaKnown RBP25.13■■□□□ 1.61
SMARCC2-210ENST00000550519 FCHSD1Q86WN1 690 aa25.13■■□□□ 1.61
SMARCC2-210ENST00000550519 NCOA7Q8NI08 942 aa25.13■■□□□ 1.61
SMARCC2-210ENST00000550519 ZFP91Q96JP5 570 aaPredicted RBP25.13■■□□□ 1.61
SMARCC2-210ENST00000550519 XIRP2A4UGR9 3374 aa25.13■■□□□ 1.61
SMARCC2-210ENST00000550519 EFCAB14O75071 495 aa25.12■■□□□ 1.61
SMARCC2-210ENST00000550519 GJB5O95377 273 aa25.12■■□□□ 1.61
SMARCC2-210ENST00000550519 SART3Q15020 963 aaKnown RBP25.12■■□□□ 1.61
SMARCC2-210ENST00000550519 ZBED2Q9BTP6 218 aa25.12■■□□□ 1.61
SMARCC2-210ENST00000550519 MLXIPQ9HAP2 919 aa25.12■■□□□ 1.61
SMARCC2-210ENST00000550519 IKBKEQ14164 716 aa25.11■■□□□ 1.61
SMARCC2-210ENST00000550519 SERINC5Q86VE9 423 aa25.11■■□□□ 1.61
SMARCC2-210ENST00000550519 RAD9AQ99638 391 aa25.11■■□□□ 1.61
SMARCC2-210ENST00000550519 PTPRSQ13332 1948 aa25.11■■□□□ 1.61
SMARCC2-210ENST00000550519 FRMPD4Q14CM0 1322 aa25.11■■□□□ 1.61
SMARCC2-210ENST00000550519 BAZ2BQ9UIF8 2168 aaKnown RBP25.1■■□□□ 1.61
SMARCC2-210ENST00000550519 SGSM2O43147 1006 aa25.1■■□□□ 1.61
SMARCC2-210ENST00000550519 HOXC8P31273 242 aa25.1■■□□□ 1.61
SMARCC2-210ENST00000550519 KCNQ1P51787 676 aa25.1■■□□□ 1.61
SMARCC2-210ENST00000550519 ANTXR2P58335 489 aa25.1■■□□□ 1.61
SMARCC2-210ENST00000550519 MRPS9P82933 396 aaKnown RBP25.1■■□□□ 1.61
SMARCC2-210ENST00000550519 IGDCC4Q8TDY8 1250 aa25.1■■□□□ 1.61
SMARCC2-210ENST00000550519 INPP4AQ96PE3 977 aaPredicted RBP25.1■■□□□ 1.61
SMARCC2-210ENST00000550519 BCAS3Q9H6U6 928 aa25.1■■□□□ 1.61
SMARCC2-210ENST00000550519 COG5Q9UP83 839 aa25.1■■□□□ 1.61
SMARCC2-210ENST00000550519 MYH7BA7E2Y1 1941 aa25.1■■□□□ 1.61
SMARCC2-210ENST00000550519 H3BRB1 525 aa25.09■■□□□ 1.61
SMARCC2-210ENST00000550519 RBAK-RBAKDNI3L0D1 243 aa25.09■■□□□ 1.61
SMARCC2-210ENST00000550519 LGR5O75473 907 aa25.09■■□□□ 1.61
SMARCC2-210ENST00000550519 STAM2O75886 525 aa25.09■■□□□ 1.61
SMARCC2-210ENST00000550519 ICAM3P32942 547 aa25.09■■□□□ 1.61
SMARCC2-210ENST00000550519 CATIPQ7Z7H3 387 aa25.09■■□□□ 1.61
SMARCC2-210ENST00000550519 MAP4K1Q92918 833 aa25.09■■□□□ 1.61
SMARCC2-210ENST00000550519 NECAB3Q96P71 396 aaPredicted RBP25.09■■□□□ 1.61
SMARCC2-210ENST00000550519 TUT1Q9H6E5 874 aaKnown RBP25.09■■□□□ 1.61
SMARCC2-210ENST00000550519 EMSYQ7Z589 1322 aa25.09■■□□□ 1.61
SMARCC2-210ENST00000550519 LGALS2P05162 132 aa25.08■■□□□ 1.61
SMARCC2-210ENST00000550519 MKRN4PQ13434 485 aaPredicted RBP25.08■■□□□ 1.61
SMARCC2-210ENST00000550519 GNPTABQ3T906 1256 aa25.08■■□□□ 1.61
SMARCC2-210ENST00000550519 MB21D2Q8IYB1 491 aaPredicted RBP25.08■■□□□ 1.61
SMARCC2-210ENST00000550519 MAP3K14Q99558 947 aa25.08■■□□□ 1.61
SMARCC2-210ENST00000550519 LMCD1Q9NZU5 365 aa25.08■■□□□ 1.61
SMARCC2-210ENST00000550519 SUPT16HQ9Y5B9 1047 aaKnown RBP25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms