RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 HOXA13P31271 388 aaPredicted RBP12.6□□□□□ -0.39
PFDN5-210ENST00000550513 GRM4Q14833 912 aa12.6□□□□□ -0.39
PFDN5-210ENST00000550513 PGM5Q15124 567 aa12.6□□□□□ -0.39
PFDN5-210ENST00000550513 KIAA0753Q2KHM9 967 aa12.6□□□□□ -0.39
PFDN5-210ENST00000550513 TTC22Q5TAA0 569 aa12.6□□□□□ -0.39
PFDN5-210ENST00000550513 KCNV1Q6PIU1 500 aa12.6□□□□□ -0.39
PFDN5-210ENST00000550513 ARNTL2Q8WYA1 636 aa12.6□□□□□ -0.39
PFDN5-210ENST00000550513 MTMR8Q96EF0 704 aa12.6□□□□□ -0.39
PFDN5-210ENST00000550513 PCDHA1Q9Y5I3 950 aa12.6□□□□□ -0.39
PFDN5-210ENST00000550513 MTCH2Q9Y6C9 303 aa12.6□□□□□ -0.39
PFDN5-210ENST00000550513 COL4A6Q14031 1691 aa12.59□□□□□ -0.39
PFDN5-210ENST00000550513 PALM3A6NDB9 673 aaPredicted RBP12.59□□□□□ -0.39
PFDN5-210ENST00000550513 HAS3O00219 553 aa12.59□□□□□ -0.39
PFDN5-210ENST00000550513 SORBS3O60504 671 aa12.59□□□□□ -0.39
PFDN5-210ENST00000550513 GGPS1O95749 300 aa12.59□□□□□ -0.39
PFDN5-210ENST00000550513 CXCL10P02778 98 aa12.59□□□□□ -0.39
PFDN5-210ENST00000550513 POU3F3P20264 500 aaPredicted RBP12.59□□□□□ -0.39
PFDN5-210ENST00000550513 UBA1P22314 1058 aaKnown RBP12.59□□□□□ -0.39
PFDN5-210ENST00000550513 PDE4AP27815 886 aa12.59□□□□□ -0.39
PFDN5-210ENST00000550513 CCND2P30279 289 aa12.59□□□□□ -0.39
PFDN5-210ENST00000550513 DEFB103AP81534 67 aa12.59□□□□□ -0.39
PFDN5-210ENST00000550513 TFF2Q03403 129 aa12.59□□□□□ -0.39
PFDN5-210ENST00000550513 TRAF1Q13077 416 aa12.59□□□□□ -0.39
PFDN5-210ENST00000550513 PTK7Q13308 1070 aa12.59□□□□□ -0.39
PFDN5-210ENST00000550513 AAK1Q2M2I8 961 aa12.59□□□□□ -0.39
PFDN5-210ENST00000550513 STOX1Q6ZVD7 989 aa12.59□□□□□ -0.39
PFDN5-210ENST00000550513 RALYLQ86SE5 291 aaKnown RBP12.59□□□□□ -0.39
PFDN5-210ENST00000550513 SAMD3Q8N6K7 520 aa12.59□□□□□ -0.39
PFDN5-210ENST00000550513 IL31RAQ8NI17 732 aa12.59□□□□□ -0.39
PFDN5-210ENST00000550513 U3KPZ7 1027 aaPredicted RBP12.59□□□□□ -0.39
PFDN5-210ENST00000550513 LCHNA4D1U4 455 aa12.58□□□□□ -0.4
PFDN5-210ENST00000550513 IFIT3O14879 490 aaKnown RBP12.58□□□□□ -0.4
PFDN5-210ENST00000550513 NBNO60934 754 aa12.58□□□□□ -0.4
PFDN5-210ENST00000550513 RGS20O76081 388 aa12.58□□□□□ -0.4
PFDN5-210ENST00000550513 CYP21A2P08686 494 aa12.58□□□□□ -0.4
PFDN5-210ENST00000550513 HOXD8P13378 290 aaPredicted RBP12.58□□□□□ -0.4
PFDN5-210ENST00000550513 GPNMBQ14956 572 aa12.58□□□□□ -0.4
PFDN5-210ENST00000550513 SART3Q15020 963 aaKnown RBP12.58□□□□□ -0.4
PFDN5-210ENST00000550513 HSDL1Q3SXM5 330 aa12.58□□□□□ -0.4
PFDN5-210ENST00000550513 CELF3Q5SZQ8 465 aaKnown RBP12.58□□□□□ -0.4
PFDN5-210ENST00000550513 MYSM1Q5VVJ2 828 aa12.58□□□□□ -0.4
PFDN5-210ENST00000550513 KRT40Q6A162 431 aa12.58□□□□□ -0.4
PFDN5-210ENST00000550513 TMCO2Q7Z6W1 182 aaPredicted RBP12.58□□□□□ -0.4
PFDN5-210ENST00000550513 RUFY2Q8WXA3 655 aa12.58□□□□□ -0.4
PFDN5-210ENST00000550513 SPATA33Q96N06 139 aa12.58□□□□□ -0.4
PFDN5-210ENST00000550513 PIGSQ96S52 555 aa12.58□□□□□ -0.4
PFDN5-210ENST00000550513 ZBED2Q9BTP6 218 aa12.58□□□□□ -0.4
PFDN5-210ENST00000550513 RIOX1Q9H6W3 641 aa12.58□□□□□ -0.4
PFDN5-210ENST00000550513 WDR81Q562E7 1941 aa12.57□□□□□ -0.4
PFDN5-210ENST00000550513 ABHD14A-ACY1A0A1B0GW23 586 aa12.57□□□□□ -0.4
PFDN5-210ENST00000550513 GCOM1H8Y6P7 765 aaPredicted RBP12.57□□□□□ -0.4
PFDN5-210ENST00000550513 EFCAB14O75071 495 aa12.57□□□□□ -0.4
PFDN5-210ENST00000550513 POLR2MP0CAP2 368 aa12.57□□□□□ -0.4
PFDN5-210ENST00000550513 KCNQ1P51787 676 aa12.57□□□□□ -0.4
PFDN5-210ENST00000550513 GRB10Q13322 594 aa12.57□□□□□ -0.4
PFDN5-210ENST00000550513 WTAPQ15007 396 aa12.57□□□□□ -0.4
PFDN5-210ENST00000550513 ZNF618Q5T7W0 954 aa12.57□□□□□ -0.4
PFDN5-210ENST00000550513 SPRED2Q7Z698 418 aa12.57□□□□□ -0.4
PFDN5-210ENST00000550513 FCHSD1Q86WN1 690 aa12.57□□□□□ -0.4
PFDN5-210ENST00000550513 NCOA7Q8NI08 942 aa12.57□□□□□ -0.4
PFDN5-210ENST00000550513 GDPD5Q8WTR4 605 aa12.57□□□□□ -0.4
PFDN5-210ENST00000550513 WNT8BQ93098 351 aa12.57□□□□□ -0.4
PFDN5-210ENST00000550513 MLXIPQ9HAP2 919 aa12.57□□□□□ -0.4
PFDN5-210ENST00000550513 FRMPD4Q14CM0 1322 aa12.57□□□□□ -0.4
PFDN5-210ENST00000550513 EMSYQ7Z589 1322 aa12.57□□□□□ -0.4
PFDN5-210ENST00000550513 PNMA6FA0A0J9YX94 578 aa12.56□□□□□ -0.4
PFDN5-210ENST00000550513 E7EWF7 191 aa12.56□□□□□ -0.4
PFDN5-210ENST00000550513 CYTH3O43739 400 aa12.56□□□□□ -0.4
PFDN5-210ENST00000550513 PPFIA4O75335 1185 aa12.56□□□□□ -0.4
PFDN5-210ENST00000550513 GJB5O95377 273 aa12.56□□□□□ -0.4
PFDN5-210ENST00000550513 TGFB3P10600 412 aa12.56□□□□□ -0.4
PFDN5-210ENST00000550513 ZNF200P98182 395 aaPredicted RBP12.56□□□□□ -0.4
PFDN5-210ENST00000550513 PTH1RQ03431 593 aa12.56□□□□□ -0.4
PFDN5-210ENST00000550513 IKBKEQ14164 716 aa12.56□□□□□ -0.4
PFDN5-210ENST00000550513 SLC35G1Q2M3R5 365 aa12.56□□□□□ -0.4
PFDN5-210ENST00000550513 TCTN1Q2MV58 587 aa12.56□□□□□ -0.4
PFDN5-210ENST00000550513 TRIM71Q2Q1W2 868 aaKnown RBP12.56□□□□□ -0.4
PFDN5-210ENST00000550513 GNPTABQ3T906 1256 aa12.56□□□□□ -0.4
PFDN5-210ENST00000550513 VSIG10LQ86VR7 867 aa12.56□□□□□ -0.4
PFDN5-210ENST00000550513 GPKOWQ92917 476 aaPredicted RBP eCLIP12.56□□□□□ -0.4
PFDN5-210ENST00000550513 ZFP91Q96JP5 570 aaPredicted RBP12.56□□□□□ -0.4
PFDN5-210ENST00000550513 NECAB3Q96P71 396 aaPredicted RBP12.56□□□□□ -0.4
PFDN5-210ENST00000550513 SENP2Q9HC62 589 aa12.56□□□□□ -0.4
PFDN5-210ENST00000550513 COG5Q9UP83 839 aa12.56□□□□□ -0.4
PFDN5-210ENST00000550513 BRWD1Q9NSI6 2320 aa12.56□□□□□ -0.4
PFDN5-210ENST00000550513 BDP1A6H8Y1 2624 aa12.56□□□□□ -0.4
PFDN5-210ENST00000550513 NOP56O00567 594 aaKnown RBP12.55□□□□□ -0.4
PFDN5-210ENST00000550513 LPXNO60711 386 aa12.55□□□□□ -0.4
PFDN5-210ENST00000550513 LGR5O75473 907 aa12.55□□□□□ -0.4
PFDN5-210ENST00000550513 STAM2O75886 525 aa12.55□□□□□ -0.4
PFDN5-210ENST00000550513 LGALS2P05162 132 aa12.55□□□□□ -0.4
PFDN5-210ENST00000550513 BMP1P13497 986 aa12.55□□□□□ -0.4
PFDN5-210ENST00000550513 CHMLP26374 656 aa12.55□□□□□ -0.4
PFDN5-210ENST00000550513 THPOP40225 353 aa12.55□□□□□ -0.4
PFDN5-210ENST00000550513 SP2Q02086 613 aa12.55□□□□□ -0.4
PFDN5-210ENST00000550513 TROAPQ12815 778 aa12.55□□□□□ -0.4
PFDN5-210ENST00000550513 HIC1Q14526 733 aa12.55□□□□□ -0.4
PFDN5-210ENST00000550513 MBTPS1Q14703 1052 aa12.55□□□□□ -0.4
PFDN5-210ENST00000550513 TRAF7Q6Q0C0 670 aa12.55□□□□□ -0.4
PFDN5-210ENST00000550513 CATIPQ7Z7H3 387 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms