RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 CA3P07451 260 aa15.48■□□□□ 0.07
NUP188-211ENST00000550219 UBA1P22314 1058 aaKnown RBP15.48■□□□□ 0.07
NUP188-211ENST00000550219 CCND2P30279 289 aa15.48■□□□□ 0.07
NUP188-211ENST00000550219 ANTXR2P58335 489 aa15.48■□□□□ 0.07
NUP188-211ENST00000550219 GHRHRQ02643 423 aa15.48■□□□□ 0.07
NUP188-211ENST00000550219 LAMC2Q13753 1193 aa15.48■□□□□ 0.07
NUP188-211ENST00000550219 KIAA0753Q2KHM9 967 aa15.48■□□□□ 0.07
NUP188-211ENST00000550219 LRRC8DQ7L1W4 858 aa15.48■□□□□ 0.07
NUP188-211ENST00000550219 PPTC7Q8NI37 304 aa15.48■□□□□ 0.07
NUP188-211ENST00000550219 CAGE1Q8TC20 777 aa15.48■□□□□ 0.07
NUP188-211ENST00000550219 EMID1Q96A84 441 aaPredicted RBP15.48■□□□□ 0.07
NUP188-211ENST00000550219 SPATA33Q96N06 139 aa15.48■□□□□ 0.07
NUP188-211ENST00000550219 SLC9A7Q96T83 725 aa15.48■□□□□ 0.07
NUP188-211ENST00000550219 RIOX1Q9H6W3 641 aa15.48■□□□□ 0.07
NUP188-211ENST00000550219 CERS4Q9HA82 394 aa15.48■□□□□ 0.07
NUP188-211ENST00000550219 GTF2IRD1Q9UHL9 959 aa15.48■□□□□ 0.07
NUP188-211ENST00000550219 PNMA6FA0A0J9YX94 578 aa15.47■□□□□ 0.07
NUP188-211ENST00000550219 RBAK-RBAKDNI3L0D1 243 aa15.47■□□□□ 0.07
NUP188-211ENST00000550219 RGS20O76081 388 aa15.47■□□□□ 0.07
NUP188-211ENST00000550219 F2P00734 622 aa15.47■□□□□ 0.07
NUP188-211ENST00000550219 KCNJ6P48051 423 aa15.47■□□□□ 0.07
NUP188-211ENST00000550219 TROAPQ12815 778 aa15.47■□□□□ 0.07
NUP188-211ENST00000550219 TRAF1Q13077 416 aa15.47■□□□□ 0.07
NUP188-211ENST00000550219 SESTD1Q86VW0 696 aa15.47■□□□□ 0.07
NUP188-211ENST00000550219 MB21D2Q8IYB1 491 aaPredicted RBP15.47■□□□□ 0.07
NUP188-211ENST00000550219 AFAP1L1Q8TED9 768 aa15.47■□□□□ 0.07
NUP188-211ENST00000550219 DHX38Q92620 1227 aaKnown RBP15.47■□□□□ 0.07
NUP188-211ENST00000550219 GPKOWQ92917 476 aaPredicted RBP eCLIP15.47■□□□□ 0.07
NUP188-211ENST00000550219 NEK1Q96PY6 1258 aa15.47■□□□□ 0.07
NUP188-211ENST00000550219 CTAGE1Q96RT6 745 aa15.47■□□□□ 0.07
NUP188-211ENST00000550219 THEGQ9P2T0 379 aa15.47■□□□□ 0.07
NUP188-211ENST00000550219 HMGB1P09429 215 aaKnown RBP15.46■□□□□ 0.07
NUP188-211ENST00000550219 SELPP16109 830 aa15.46■□□□□ 0.07
NUP188-211ENST00000550219 PSMA5P28066 241 aa15.46■□□□□ 0.07
NUP188-211ENST00000550219 COL9A3Q14050 684 aaPredicted RBP15.46■□□□□ 0.07
NUP188-211ENST00000550219 HSDL1Q3SXM5 330 aa15.46■□□□□ 0.07
NUP188-211ENST00000550219 TJAP1Q5JTD0 557 aa15.46■□□□□ 0.07
NUP188-211ENST00000550219 CELF3Q5SZQ8 465 aaKnown RBP15.46■□□□□ 0.07
NUP188-211ENST00000550219 NFXL1Q6ZNB6 911 aa15.46■□□□□ 0.07
NUP188-211ENST00000550219 ZNF654Q8IZM8 581 aa15.46■□□□□ 0.07
NUP188-211ENST00000550219 CTCFLQ8NI51 663 aaPredicted RBP15.46■□□□□ 0.07
NUP188-211ENST00000550219 JAKMIP1Q96N16 626 aaKnown RBP15.46■□□□□ 0.07
NUP188-211ENST00000550219 MLXIPQ9HAP2 919 aa15.46■□□□□ 0.07
NUP188-211ENST00000550219 ZSWIM6Q9HCJ5 1215 aa15.46■□□□□ 0.07
NUP188-211ENST00000550219 MAP3K20Q9NYL2 800 aaKnown RBP15.46■□□□□ 0.07
NUP188-211ENST00000550219 RFXAPO00287 272 aa15.45■□□□□ 0.06
NUP188-211ENST00000550219 PRC1O43663 620 aa15.45■□□□□ 0.06
NUP188-211ENST00000550219 CKBP12277 381 aa15.45■□□□□ 0.06
NUP188-211ENST00000550219 ZNF200P98182 395 aaPredicted RBP15.45■□□□□ 0.06
NUP188-211ENST00000550219 EXOSC10Q01780 885 aaKnown RBP15.45■□□□□ 0.06
NUP188-211ENST00000550219 MYSM1Q5VVJ2 828 aa15.45■□□□□ 0.06
NUP188-211ENST00000550219 KCNV1Q6PIU1 500 aa15.45■□□□□ 0.06
NUP188-211ENST00000550219 TMCO2Q7Z6W1 182 aaPredicted RBP15.45■□□□□ 0.06
NUP188-211ENST00000550219 VSIG10LQ86VR7 867 aa15.45■□□□□ 0.06
NUP188-211ENST00000550219 RAB11FIP4Q86YS3 637 aa15.45■□□□□ 0.06
NUP188-211ENST00000550219 HERC6Q8IVU3 1022 aa15.45■□□□□ 0.06
NUP188-211ENST00000550219 SAMD3Q8N6K7 520 aa15.45■□□□□ 0.06
NUP188-211ENST00000550219 SYMPKQ92797 1274 aaKnown RBP15.45■□□□□ 0.06
NUP188-211ENST00000550219 LY9Q9HBG7 655 aa15.45■□□□□ 0.06
NUP188-211ENST00000550219 SEC63Q9UGP8 760 aaKnown RBP15.45■□□□□ 0.06
NUP188-211ENST00000550219 HAS3O00219 553 aa15.44■□□□□ 0.06
NUP188-211ENST00000550219 NOP56O00567 594 aaKnown RBP15.44■□□□□ 0.06
NUP188-211ENST00000550219 DDAH1O94760 285 aa15.44■□□□□ 0.06
NUP188-211ENST00000550219 BAIAP3O94812 1187 aa15.44■□□□□ 0.06
NUP188-211ENST00000550219 ARHGEF15O94989 841 aa15.44■□□□□ 0.06
NUP188-211ENST00000550219 RXRAP19793 462 aa15.44■□□□□ 0.06
NUP188-211ENST00000550219 WDR5P61964 334 aaKnown RBP15.44■□□□□ 0.06
NUP188-211ENST00000550219 SP2Q02086 613 aa15.44■□□□□ 0.06
NUP188-211ENST00000550219 SKIV2LQ15477 1246 aaKnown RBP15.44■□□□□ 0.06
NUP188-211ENST00000550219 DHX32Q7L7V1 743 aaKnown RBP15.44■□□□□ 0.06
NUP188-211ENST00000550219 IL27Q8NEV9 243 aa15.44■□□□□ 0.06
NUP188-211ENST00000550219 SMARCC2Q8TAQ2 1214 aa15.44■□□□□ 0.06
NUP188-211ENST00000550219 IGDCC4Q8TDY8 1250 aa15.44■□□□□ 0.06
NUP188-211ENST00000550219 ARNTL2Q8WYA1 636 aa15.44■□□□□ 0.06
NUP188-211ENST00000550219 WNT8BQ93098 351 aa15.44■□□□□ 0.06
NUP188-211ENST00000550219 RRP36Q96EU6 259 aaKnown RBP15.44■□□□□ 0.06
NUP188-211ENST00000550219 MTA3Q9BTC8 594 aa15.44■□□□□ 0.06
NUP188-211ENST00000550219 COL4A4P53420 1690 aaPredicted RBP15.44■□□□□ 0.06
NUP188-211ENST00000550219 PTPRSQ13332 1948 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 CCDC69A6NI79 296 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 KIF28PB7ZC32 967 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 TLL1O43897 1013 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 NBNO60934 754 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 PLEKHA8P1O95397 391 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 RPS6KB1P23443 525 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 KIF5BP33176 963 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 MCM5P33992 734 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 DEFB103AP81534 67 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 SP4Q02446 784 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 PTK7Q13308 1070 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 GNPTABQ3T906 1256 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 CNKSR3Q6P9H4 555 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 BLOC1S2Q6QNY1 142 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 RUFY3Q7L099 469 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 FBXL16Q8N461 479 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 PHOSPHO2Q8TCD6 241 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 CUL5Q93034 780 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 SPZ1Q9BXG8 430 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 RTEL1Q9NZ71 1219 aa15.43■□□□□ 0.06
NUP188-211ENST00000550219 MYH7BA7E2Y1 1941 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms