RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 NEDD9Q14511 834 aa11.06□□□□□ -0.64
SMARCD1-206ENST00000549274 CALCRLQ16602 461 aa11.06□□□□□ -0.64
SMARCD1-206ENST00000549274 BRDTQ58F21 947 aaPredicted RBP11.06□□□□□ -0.64
SMARCD1-206ENST00000549274 IQSEC1Q6DN90 963 aa11.06□□□□□ -0.64
SMARCD1-206ENST00000549274 PLA2G4DQ86XP0 818 aa11.06□□□□□ -0.64
SMARCD1-206ENST00000549274 NPLOC4Q8TAT6 608 aa11.06□□□□□ -0.64
SMARCD1-206ENST00000549274 FERMT2Q96AC1 680 aa11.06□□□□□ -0.64
SMARCD1-206ENST00000549274 RIT2Q99578 217 aa11.06□□□□□ -0.64
SMARCD1-206ENST00000549274 SDF4Q9BRK5 362 aa11.06□□□□□ -0.64
SMARCD1-206ENST00000549274 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.06□□□□□ -0.64
SMARCD1-206ENST00000549274 NFASCO94856 1347 aa11.06□□□□□ -0.64
SMARCD1-206ENST00000549274 TCHHQ07283 1943 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 ZSWIM8A7E2V4 1837 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 RBM47A0AV96 593 aaKnown RBP11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 HAX1O00165 279 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 SLC26A4O43511 780 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 PPP6R2O75170 966 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 OR52Z1P0C646 297 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 CTGFP29279 349 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 GRK4P32298 578 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 NASPP49321 788 aaPredicted RBP11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 MRPS9P82933 396 aaKnown RBP11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 STK38Q15208 465 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 SF3A1Q15459 793 aaKnown RBP11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 PRR16Q569H4 304 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 ANO1Q5XXA6 986 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 FBXO46Q6PJ61 603 aaPredicted RBP11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 RDM1Q8NG50 284 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 PGBD1Q96JS3 809 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 FGD4Q96M96 766 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 ARHGAP39Q9C0H5 1083 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 SPC25Q9HBM1 224 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 RTEL1Q9NZ71 1219 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 TSKSQ9UJT2 592 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 FAM184BQ9ULE4 1060 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 GABRQQ9UN88 632 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 PTPN22Q9Y2R2 807 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 Q9Y3F1 56 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 MRVI1Q9Y6F6 885 aa11.05□□□□□ -0.64
SMARCD1-206ENST00000549274 SPATA31C2B4DYI2 1134 aa11.04□□□□□ -0.64
SMARCD1-206ENST00000549274 DKC1O60832 514 aaKnown RBP eCLIP11.04□□□□□ -0.64
SMARCD1-206ENST00000549274 AKR1A1P14550 325 aa11.04□□□□□ -0.64
SMARCD1-206ENST00000549274 NCLP19338 710 aaKnown RBP11.04□□□□□ -0.64
SMARCD1-206ENST00000549274 PTMSP20962 102 aa11.04□□□□□ -0.64
SMARCD1-206ENST00000549274 MCM7P33993 719 aa11.04□□□□□ -0.64
SMARCD1-206ENST00000549274 LBX1P52954 281 aa11.04□□□□□ -0.64
SMARCD1-206ENST00000549274 ATP2C1P98194 919 aaPredicted RBP11.04□□□□□ -0.64
SMARCD1-206ENST00000549274 KRT76Q01546 638 aa11.04□□□□□ -0.64
SMARCD1-206ENST00000549274 PKP1Q13835 747 aa11.04□□□□□ -0.64
SMARCD1-206ENST00000549274 SLC9C1Q4G0N8 1177 aa11.04□□□□□ -0.64
SMARCD1-206ENST00000549274 KCTD17Q8N5Z5 321 aa11.04□□□□□ -0.64
SMARCD1-206ENST00000549274 AK8Q96MA6 479 aa11.04□□□□□ -0.64
SMARCD1-206ENST00000549274 ZNF577Q9BSK1 485 aa11.04□□□□□ -0.64
SMARCD1-206ENST00000549274 TEKT3Q9BXF9 490 aa11.04□□□□□ -0.64
SMARCD1-206ENST00000549274 KCNMB3Q9NPA1 279 aa11.04□□□□□ -0.64
SMARCD1-206ENST00000549274 KCNH7Q9NS40 1196 aa11.04□□□□□ -0.64
SMARCD1-206ENST00000549274 ZHX1Q9UKY1 873 aaPredicted RBP11.04□□□□□ -0.64
SMARCD1-206ENST00000549274 ASTN1O14525 1302 aa11.04□□□□□ -0.64
SMARCD1-206ENST00000549274 IGLV3-22A0A075B6J6 115 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 FAM86B1E9PN63 330 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 IPO5O00410 1097 aaKnown RBP11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 GAS7O60861 476 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 TDP2O95551 362 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 IGHA2P01877 340 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 FAM86B2P0C5J1 330 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 ITGB5P18084 799 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 ATP2B1P20020 1258 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 SFNP31947 248 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 TXLNAP40222 546 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 PTGDRQ13258 359 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 LAMC2Q13753 1193 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 PDIA5Q14554 519 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 SLC39A14Q15043 492 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 ZNF174Q15697 407 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 EARS2Q5JPH6 523 aaKnown RBP11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 LRCH2Q5VUJ6 765 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 FOXD4L5Q5VV16 416 aaPredicted RBP11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 DTHD1Q6ZMT9 781 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 CLEC17AQ6ZS10 378 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 SEPT14Q6ZU15 432 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 SMAP1Q8IYB5 467 aaPredicted RBP11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 PIP4P2Q8N4L2 257 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 IL31RAQ8NI17 732 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 ERMNQ8TAM6 284 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 NEK9Q8TD19 979 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 FOXD4L4Q8WXT5 416 aaPredicted RBP11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 TRIB2Q92519 343 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 EMID1Q96A84 441 aaPredicted RBP11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 SPATA32Q96LK8 384 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 PYM1Q9BRP8 204 aaKnown RBP11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 AGO4Q9HCK5 861 aaKnown RBP11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 HMX1Q9NP08 348 aaPredicted RBP11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 PCDHA12Q9UN75 941 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 ZDHHC9Q9Y397 364 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 PCDHB6Q9Y5E3 794 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 LOXHD1Q8IVV2 1947 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 ELP1O95163 1332 aa11.03□□□□□ -0.64
SMARCD1-206ENST00000549274 GOLGA6L4A6NEF3 574 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 SPTLC2O15270 562 aa11.02□□□□□ -0.65
SMARCD1-206ENST00000549274 SEPT4O43236 478 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms