RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 CTGFP29279 349 aa32.52■■■□□ 2.8
BRF1-213ENST00000548421 TMEM266Q2M3C6 531 aa32.52■■■□□ 2.8
BRF1-213ENST00000548421 GNPTABQ3T906 1256 aa32.52■■■□□ 2.8
BRF1-213ENST00000548421 MORC4Q8TE76 937 aa32.52■■■□□ 2.8
BRF1-213ENST00000548421 GPRASP2Q96D09 838 aa32.52■■■□□ 2.8
BRF1-213ENST00000548421 CSRNP2Q9H175 543 aa32.52■■■□□ 2.8
BRF1-213ENST00000548421 KCNH7Q9NS40 1196 aa32.52■■■□□ 2.8
BRF1-213ENST00000548421 ARP10275 920 aa32.51■■■□□ 2.79
BRF1-213ENST00000548421 LONP1P36776 959 aaKnown RBP32.51■■■□□ 2.79
BRF1-213ENST00000548421 PSMC4P43686 418 aa32.51■■■□□ 2.79
BRF1-213ENST00000548421 MAP2K1Q02750 393 aaPredicted RBP32.51■■■□□ 2.79
BRF1-213ENST00000548421 MAFGO15525 162 aa32.5■■■□□ 2.79
BRF1-213ENST00000548421 FXR2P51116 673 aaKnown RBP eCLIP32.5■■■□□ 2.79
BRF1-213ENST00000548421 KIF22Q14807 665 aa32.5■■■□□ 2.79
BRF1-213ENST00000548421 USP6NLQ92738 828 aa32.5■■■□□ 2.79
BRF1-213ENST00000548421 ZNF577Q9BSK1 485 aa32.5■■■□□ 2.79
BRF1-213ENST00000548421 TTC12Q9H892 705 aaPredicted RBP32.5■■■□□ 2.79
BRF1-213ENST00000548421 HOXC6P09630 235 aa32.49■■■□□ 2.79
BRF1-213ENST00000548421 CMA1P23946 247 aa32.49■■■□□ 2.79
BRF1-213ENST00000548421 SHC4Q6S5L8 630 aa32.49■■■□□ 2.79
BRF1-213ENST00000548421 MRPS27Q92552 414 aaKnown RBP32.49■■■□□ 2.79
BRF1-213ENST00000548421 SLC5A5Q92911 643 aa32.49■■■□□ 2.79
BRF1-213ENST00000548421 MAML3Q96JK9 1138 aa32.49■■■□□ 2.79
BRF1-213ENST00000548421 CDHR1Q96JP9 859 aa32.49■■■□□ 2.79
BRF1-213ENST00000548421 TRIM47Q96LD4 638 aa32.49■■■□□ 2.79
BRF1-213ENST00000548421 PCDHA12Q9UN75 941 aa32.49■■■□□ 2.79
BRF1-213ENST00000548421 RGS20O76081 388 aa32.48■■■□□ 2.79
BRF1-213ENST00000548421 RGS2P41220 211 aa32.48■■■□□ 2.79
BRF1-213ENST00000548421 TECP42680 631 aa32.48■■■□□ 2.79
BRF1-213ENST00000548421 RESP18Q5W5W9 173 aa32.48■■■□□ 2.79
BRF1-213ENST00000548421 GJA10Q969M2 543 aa32.48■■■□□ 2.79
BRF1-213ENST00000548421 UIMC1Q96RL1 719 aa32.48■■■□□ 2.79
BRF1-213ENST00000548421 RAB34Q9BZG1 259 aa32.48■■■□□ 2.79
BRF1-213ENST00000548421 ARHGAP39Q9C0H5 1083 aa32.48■■■□□ 2.79
BRF1-213ENST00000548421 AGO4Q9HCK5 861 aaKnown RBP32.48■■■□□ 2.79
BRF1-213ENST00000548421 GJD2Q9UKL4 321 aa32.48■■■□□ 2.79
BRF1-213ENST00000548421 IPO5O00410 1097 aaKnown RBP32.48■■■□□ 2.79
BRF1-213ENST00000548421 MBD3O95983 291 aa32.48■■■□□ 2.79
BRF1-213ENST00000548421 MAMDC4Q6UXC1 1216 aa32.48■■■□□ 2.79
BRF1-213ENST00000548421 ARMCX2Q7L311 632 aa32.48■■■□□ 2.79
BRF1-213ENST00000548421 IGSF22Q8N9C0 903 aa32.48■■■□□ 2.79
BRF1-213ENST00000548421 FSIP1Q8NA03 581 aa32.48■■■□□ 2.79
BRF1-213ENST00000548421 NPLOC4Q8TAT6 608 aa32.48■■■□□ 2.79
BRF1-213ENST00000548421 AK8Q96MA6 479 aa32.48■■■□□ 2.79
BRF1-213ENST00000548421 GPR25O00155 361 aa32.47■■■□□ 2.79
BRF1-213ENST00000548421 SPECC1Q5M775 1068 aa32.47■■■□□ 2.79
BRF1-213ENST00000548421 LRCH2Q5VUJ6 765 aa32.47■■■□□ 2.79
BRF1-213ENST00000548421 BEGAINQ9BUH8 593 aa32.47■■■□□ 2.79
BRF1-213ENST00000548421 PDIA5Q14554 519 aa32.46■■■□□ 2.79
BRF1-213ENST00000548421 MSL3Q8N5Y2 521 aaKnown RBP32.46■■■□□ 2.79
BRF1-213ENST00000548421 GPT2Q8TD30 523 aa32.46■■■□□ 2.79
BRF1-213ENST00000548421 RIT2Q99578 217 aa32.46■■■□□ 2.79
BRF1-213ENST00000548421 APBA2Q99767 749 aa32.46■■■□□ 2.79
BRF1-213ENST00000548421 ICAM3P32942 547 aa32.45■■■□□ 2.79
BRF1-213ENST00000548421 FAM13BQ9NYF5 915 aa32.45■■■□□ 2.79
BRF1-213ENST00000548421 CASP8AP2Q9UKL3 1982 aa32.44■■■□□ 2.78
BRF1-213ENST00000548421 SPATA31C2B4DYI2 1134 aa32.44■■■□□ 2.78
BRF1-213ENST00000548421 GAS7O60861 476 aa32.44■■■□□ 2.78
BRF1-213ENST00000548421 PSMD10O75832 226 aa32.44■■■□□ 2.78
BRF1-213ENST00000548421 SEMA3FQ13275 785 aa32.44■■■□□ 2.78
BRF1-213ENST00000548421 SKOR2Q2VWA4 1001 aaPredicted RBP32.44■■■□□ 2.78
BRF1-213ENST00000548421 CCDC73Q6ZRK6 1079 aa32.44■■■□□ 2.78
BRF1-213ENST00000548421 SEPT14Q6ZU15 432 aa32.44■■■□□ 2.78
BRF1-213ENST00000548421 SYMPKQ92797 1274 aaKnown RBP32.44■■■□□ 2.78
BRF1-213ENST00000548421 TINF2Q9BSI4 451 aa32.44■■■□□ 2.78
BRF1-213ENST00000548421 GOLPH3LQ9H4A5 285 aa32.44■■■□□ 2.78
BRF1-213ENST00000548421 SYNGAP1Q96PV0 1343 aa32.44■■■□□ 2.78
BRF1-213ENST00000548421 A0A1B0GVL5 298 aa32.43■■■□□ 2.78
BRF1-213ENST00000548421 CYP2B6P20813 491 aa32.43■■■□□ 2.78
BRF1-213ENST00000548421 EEPD1Q7L9B9 569 aa32.43■■■□□ 2.78
BRF1-213ENST00000548421 TEKT3Q9BXF9 490 aa32.43■■■□□ 2.78
BRF1-213ENST00000548421 TBC1D22BQ9NU19 505 aa32.43■■■□□ 2.78
BRF1-213ENST00000548421 PKD2L1Q9P0L9 805 aa32.43■■■□□ 2.78
BRF1-213ENST00000548421 LRWD1Q9UFC0 647 aa32.43■■■□□ 2.78
BRF1-213ENST00000548421 VAV3Q9UKW4 847 aa32.43■■■□□ 2.78
BRF1-213ENST00000548421 FAM237AA0A1B0GTK4 181 aa32.42■■■□□ 2.78
BRF1-213ENST00000548421 POTEMA6NI47 508 aa32.42■■■□□ 2.78
BRF1-213ENST00000548421 PFKFB1P16118 471 aa32.42■■■□□ 2.78
BRF1-213ENST00000548421 SPIRE1Q08AE8 756 aa32.42■■■□□ 2.78
BRF1-213ENST00000548421 ITGB3BPQ13352 177 aaPredicted RBP32.42■■■□□ 2.78
BRF1-213ENST00000548421 EPSTI1Q96J88 318 aa32.42■■■□□ 2.78
BRF1-213ENST00000548421 CDKN2AIPQ9NXV6 580 aaPredicted RBP32.42■■■□□ 2.78
BRF1-213ENST00000548421 LIG1P18858 919 aa32.42■■■□□ 2.78
BRF1-213ENST00000548421 TXLNAP40222 546 aa32.42■■■□□ 2.78
BRF1-213ENST00000548421 USP49Q70CQ1 688 aa32.42■■■□□ 2.78
BRF1-213ENST00000548421 FBXO16Q8IX29 292 aaPredicted RBP32.42■■■□□ 2.78
BRF1-213ENST00000548421 CD99L2Q8TCZ2 262 aa32.42■■■□□ 2.78
BRF1-213ENST00000548421 VTA1Q9NP79 307 aa32.42■■■□□ 2.78
BRF1-213ENST00000548421 HPSEQ9Y251 543 aa32.42■■■□□ 2.78
BRF1-213ENST00000548421 DOCK5Q9H7D0 1870 aa32.41■■■□□ 2.78
BRF1-213ENST00000548421 TRAK2O60296 914 aa32.41■■■□□ 2.78
BRF1-213ENST00000548421 FKTNO75072 461 aa32.41■■■□□ 2.78
BRF1-213ENST00000548421 ATP9AO75110 1047 aa32.41■■■□□ 2.78
BRF1-213ENST00000548421 KCNA2P16389 499 aa32.41■■■□□ 2.78
BRF1-213ENST00000548421 NDUFA8P51970 172 aa32.41■■■□□ 2.78
BRF1-213ENST00000548421 PPP2R5CQ13362 524 aa32.41■■■□□ 2.78
BRF1-213ENST00000548421 KLHL40Q2TBA0 621 aa32.41■■■□□ 2.78
BRF1-213ENST00000548421 OLFML2BQ68BL8 750 aa32.41■■■□□ 2.78
BRF1-213ENST00000548421 KCNV1Q6PIU1 500 aa32.41■■■□□ 2.78
BRF1-213ENST00000548421 OTOP1Q7RTM1 612 aa32.41■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms