RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 PALMO75781 387 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 KRT14P02533 472 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 PLEKP08567 350 aaPredicted RBP10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 TMC4Q7Z404 712 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 SPATS2Q86XZ4 545 aaKnown RBP10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 CERKQ8TCT0 537 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 PAIP2Q9BPZ3 127 aaKnown RBP10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 KANSL2Q9H9L4 492 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 MAGEF1Q9HAY2 307 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 KCNK9Q9NPC2 374 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 PCDHB13Q9Y5F0 798 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 GUCY1A3Q02108 690 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 CETN1Q12798 172 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 EZH2Q15910 746 aaKnown RBP10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 PRR5LQ6MZQ0 368 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 AP1M1Q9BXS5 423 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 CLRN2A0PK11 232 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 FOXP2O15409 715 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 HLA-DOAP06340 250 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 RPL13P26373 211 aaKnown RBP10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 CHRNA5P30532 468 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 GPSM2P81274 684 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 TROAPQ12815 778 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 PLS1Q14651 629 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 GPBP1Q86WP2 473 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 NSRP1Q9H0G5 558 aaKnown RBP10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 TMEM60Q9H2L4 133 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 SLIT3O75094 1523 aa10.42□□□□□ -0.74
CALCOCO1-210ENST00000548263 CCDC172P0C7W6 258 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 GRAPQ13588 217 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 E2F5Q15329 346 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 GKAP1Q5VSY0 366 aaPredicted RBP10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 AMIGO3Q86WK7 504 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 GRAPLQ8TC17 118 aaPredicted RBP10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 DCP1AQ9NPI6 582 aaPredicted RBP10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 MTRF1LQ9UGC7 380 aaKnown RBP10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 ARMCX3Q9UH62 379 aaPredicted RBP10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 H0YIN7 160 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 H2AFZP0C0S5 128 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 EPB41P11171 864 aaKnown RBP10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 SLC16A2P36021 539 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 EN1Q05925 392 aaPredicted RBP10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 MTMR3Q13615 1198 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 PRKG1Q13976 671 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 PPP1R7Q15435 360 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 H2AFVQ71UI9 128 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 SPICE1Q8N0Z3 855 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 COA7Q96BR5 231 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 PIGSQ96S52 555 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 RNF14Q9UBS8 474 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 PLAAQ9Y263 795 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 RNF225M0QZC1 329 aaPredicted RBP10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 TULP2O00295 520 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 TNFAIP3P21580 790 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 HERVK_113P62684 666 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 KCNB1Q14721 858 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 HS2ST1Q7LGA3 356 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 TRIM9Q9C026 710 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 SWAP70Q9UH65 585 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 NOVA2Q9UNW9 492 aaKnown RBP10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 COL4A3BPQ9Y5P4 624 aa10.41□□□□□ -0.74
CALCOCO1-210ENST00000548263 PPEF1O14829 653 aaPredicted RBP10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 EIF3HO15372 352 aaKnown RBP eCLIP10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 RAD17O75943 681 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 FAM13AO94988 1023 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 SLURP2P0DP57 97 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 SLC1A4P43007 532 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 CLNS1AP54105 237 aaKnown RBP10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 PKN1Q16512 942 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 USH1GQ495M9 461 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 CUL5Q93034 780 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 FAM53CQ9NYF3 392 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 AMFRQ9UKV5 643 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 KIAA1024Q9UPX6 916 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 CALRP27797 417 aaKnown RBP10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 BARGINQ6ZT62 677 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 LRRC4BQ9NT99 713 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 RBM12Q9NTZ6 932 aaKnown RBP10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 TNS2Q63HR2 1409 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 TCRBV5S4A2TA0A5A2 114 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 POTEMA6NI47 508 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 FANCGO15287 622 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 PPIP5K2O43314 1243 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 SERPING1P05155 500 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 XRCC5P13010 732 aaKnown RBP10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 CARSP49589 748 aaKnown RBP10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 PMS1P54277 932 aaKnown RBP10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 SNAP25P60880 206 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 ARHGAP44Q17R89 818 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 DGKHQ86XP1 1220 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 OGFOD1Q8N543 542 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 GIMAP8Q8ND71 665 aaPredicted RBP10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 ARL8AQ96BM9 186 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 EHD4Q9H223 541 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 CD209Q9NNX6 404 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 PKD2L1Q9P0L9 805 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 ATP8A1Q9Y2Q0 1164 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 CAPN6Q9Y6Q1 641 aa10.4□□□□□ -0.74
CALCOCO1-210ENST00000548263 SPDYE3A6NKU9 549 aa10.39□□□□□ -0.75
CALCOCO1-210ENST00000548263 TCP10L2B9ZVM9 353 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms