RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 GPKOWQ92917 476 aaPredicted RBP eCLIP23.62■■□□□ 1.37
SSH1-207ENST00000547862 SPATA33Q96N06 139 aa23.62■■□□□ 1.37
SSH1-207ENST00000547862 TRANK1O15050 2925 aa23.61■■□□□ 1.37
SSH1-207ENST00000547862 KIF28PB7ZC32 967 aa23.61■■□□□ 1.37
SSH1-207ENST00000547862 GTPBP6O43824 516 aaPredicted RBP23.61■■□□□ 1.37
SSH1-207ENST00000547862 TLL1O43897 1013 aa23.61■■□□□ 1.37
SSH1-207ENST00000547862 BAIAP3O94812 1187 aa23.61■■□□□ 1.37
SSH1-207ENST00000547862 CKBP12277 381 aa23.61■■□□□ 1.37
SSH1-207ENST00000547862 UBA1P22314 1058 aaKnown RBP23.61■■□□□ 1.37
SSH1-207ENST00000547862 CHMLP26374 656 aa23.61■■□□□ 1.37
SSH1-207ENST00000547862 CCND2P30279 289 aa23.61■■□□□ 1.37
SSH1-207ENST00000547862 WDR5P61964 334 aaKnown RBP23.61■■□□□ 1.37
SSH1-207ENST00000547862 DEFB103AP81534 67 aa23.61■■□□□ 1.37
SSH1-207ENST00000547862 ZNF200P98182 395 aaPredicted RBP23.61■■□□□ 1.37
SSH1-207ENST00000547862 SPRED2Q7Z698 418 aa23.61■■□□□ 1.37
SSH1-207ENST00000547862 PHOSPHO2Q8TCD6 241 aa23.61■■□□□ 1.37
SSH1-207ENST00000547862 EMID1Q96A84 441 aaPredicted RBP23.61■■□□□ 1.37
SSH1-207ENST00000547862 TSPYL2Q9H2G4 693 aaPredicted RBP23.61■■□□□ 1.37
SSH1-207ENST00000547862 MICAL3Q7RTP6 2002 aa23.6■■□□□ 1.37
SSH1-207ENST00000547862 GCOM1H8Y6P7 765 aaPredicted RBP23.6■■□□□ 1.37
SSH1-207ENST00000547862 RGS20O76081 388 aa23.6■■□□□ 1.37
SSH1-207ENST00000547862 POLR2MP0CAP2 368 aa23.6■■□□□ 1.37
SSH1-207ENST00000547862 TAP1Q03518 808 aa23.6■■□□□ 1.37
SSH1-207ENST00000547862 SART3Q15020 963 aaKnown RBP23.6■■□□□ 1.37
SSH1-207ENST00000547862 WNT8BQ93098 351 aa23.6■■□□□ 1.37
SSH1-207ENST00000547862 ZBED2Q9BTP6 218 aa23.6■■□□□ 1.37
SSH1-207ENST00000547862 SIP14410 1827 aa23.6■■□□□ 1.37
SSH1-207ENST00000547862 LCHNA4D1U4 455 aa23.59■■□□□ 1.37
SSH1-207ENST00000547862 E7EWF7 191 aa23.59■■□□□ 1.37
SSH1-207ENST00000547862 CYTH3O43739 400 aa23.59■■□□□ 1.37
SSH1-207ENST00000547862 NBNO60934 754 aa23.59■■□□□ 1.37
SSH1-207ENST00000547862 GHRHRQ02643 423 aa23.59■■□□□ 1.37
SSH1-207ENST00000547862 TFF2Q03403 129 aa23.59■■□□□ 1.37
SSH1-207ENST00000547862 TCTN1Q2MV58 587 aa23.59■■□□□ 1.37
SSH1-207ENST00000547862 HSDL1Q3SXM5 330 aa23.59■■□□□ 1.37
SSH1-207ENST00000547862 CELF3Q5SZQ8 465 aaKnown RBP23.59■■□□□ 1.37
SSH1-207ENST00000547862 CNKSR3Q6P9H4 555 aa23.59■■□□□ 1.37
SSH1-207ENST00000547862 STOX1Q6ZVD7 989 aa23.59■■□□□ 1.37
SSH1-207ENST00000547862 NCOA7Q8NI08 942 aa23.59■■□□□ 1.37
SSH1-207ENST00000547862 UHRF1Q96T88 793 aaPredicted RBP23.59■■□□□ 1.37
SSH1-207ENST00000547862 GPNMBQ14956 572 aa23.58■■□□□ 1.37
SSH1-207ENST00000547862 MYSM1Q5VVJ2 828 aa23.58■■□□□ 1.37
SSH1-207ENST00000547862 FAM117BQ6P1L5 589 aa23.58■■□□□ 1.37
SSH1-207ENST00000547862 MYL10Q9BUA6 226 aa23.58■■□□□ 1.37
SSH1-207ENST00000547862 RIOX1Q9H6W3 641 aa23.58■■□□□ 1.37
SSH1-207ENST00000547862 MLXIPQ9HAP2 919 aa23.58■■□□□ 1.37
SSH1-207ENST00000547862 MTCH2Q9Y6C9 303 aa23.58■■□□□ 1.37
SSH1-207ENST00000547862 HAS3O00219 553 aa23.57■■□□□ 1.36
SSH1-207ENST00000547862 SP2Q02086 613 aa23.57■■□□□ 1.36
SSH1-207ENST00000547862 PTK7Q13308 1070 aa23.57■■□□□ 1.36
SSH1-207ENST00000547862 ZNF618Q5T7W0 954 aa23.57■■□□□ 1.36
SSH1-207ENST00000547862 KCNV1Q6PIU1 500 aa23.57■■□□□ 1.36
SSH1-207ENST00000547862 CATIPQ7Z7H3 387 aa23.57■■□□□ 1.36
SSH1-207ENST00000547862 VSIG10LQ86VR7 867 aa23.57■■□□□ 1.36
SSH1-207ENST00000547862 NECAB3Q96P71 396 aaPredicted RBP23.57■■□□□ 1.36
SSH1-207ENST00000547862 MAP3K20Q9NYL2 800 aaKnown RBP23.57■■□□□ 1.36
SSH1-207ENST00000547862 MTUS1Q9ULD2 1270 aa23.57■■□□□ 1.36
SSH1-207ENST00000547862 ANTXR2P58335 489 aa23.56■■□□□ 1.36
SSH1-207ENST00000547862 RBL2Q08999 1139 aa23.56■■□□□ 1.36
SSH1-207ENST00000547862 HIC1Q14526 733 aa23.56■■□□□ 1.36
SSH1-207ENST00000547862 GDPD5Q8WTR4 605 aa23.56■■□□□ 1.36
SSH1-207ENST00000547862 PNMA6FA0A0J9YX94 578 aa23.55■■□□□ 1.36
SSH1-207ENST00000547862 SGSM2O43147 1006 aa23.55■■□□□ 1.36
SSH1-207ENST00000547862 TRAF1Q13077 416 aa23.55■■□□□ 1.36
SSH1-207ENST00000547862 TRIM71Q2Q1W2 868 aaKnown RBP23.55■■□□□ 1.36
SSH1-207ENST00000547862 BCAS3Q9H6U6 928 aa23.55■■□□□ 1.36
SSH1-207ENST00000547862 NOP56O00567 594 aaKnown RBP23.54■■□□□ 1.36
SSH1-207ENST00000547862 CXCL10P02778 98 aa23.54■■□□□ 1.36
SSH1-207ENST00000547862 THPOP40225 353 aa23.54■■□□□ 1.36
SSH1-207ENST00000547862 KCNQ1P51787 676 aa23.54■■□□□ 1.36
SSH1-207ENST00000547862 SP4Q02446 784 aa23.54■■□□□ 1.36
SSH1-207ENST00000547862 TROAPQ12815 778 aa23.54■■□□□ 1.36
SSH1-207ENST00000547862 GRB10Q13322 594 aa23.54■■□□□ 1.36
SSH1-207ENST00000547862 RTEL1Q9NZ71 1219 aa23.54■■□□□ 1.36
SSH1-207ENST00000547862 RBM8AQ9Y5S9 174 aaKnown RBP23.54■■□□□ 1.36
SSH1-207ENST00000547862 C17orf102A2RUQ5 167 aa23.53■■□□□ 1.36
SSH1-207ENST00000547862 PPFIA4O75335 1185 aa23.53■■□□□ 1.36
SSH1-207ENST00000547862 PARNO95453 639 aaKnown RBP23.53■■□□□ 1.36
SSH1-207ENST00000547862 LGALS2P05162 132 aa23.53■■□□□ 1.36
SSH1-207ENST00000547862 HOXD8P13378 290 aaPredicted RBP23.53■■□□□ 1.36
SSH1-207ENST00000547862 MBTPS1Q14703 1052 aa23.53■■□□□ 1.36
SSH1-207ENST00000547862 GNPTABQ3T906 1256 aa23.53■■□□□ 1.36
SSH1-207ENST00000547862 MB21D2Q8IYB1 491 aaPredicted RBP23.53■■□□□ 1.36
SSH1-207ENST00000547862 ZNF654Q8IZM8 581 aa23.53■■□□□ 1.36
SSH1-207ENST00000547862 SAMD3Q8N6K7 520 aa23.53■■□□□ 1.36
SSH1-207ENST00000547862 SMARCC2Q8TAQ2 1214 aa23.53■■□□□ 1.36
SSH1-207ENST00000547862 C16orf70Q9BSU1 422 aa23.53■■□□□ 1.36
SSH1-207ENST00000547862 MUC3AQ02505 3323 aa23.53■■□□□ 1.36
SSH1-207ENST00000547862 KAT6AQ92794 2004 aa23.52■■□□□ 1.36
SSH1-207ENST00000547862 CTSHP09668 335 aa23.52■■□□□ 1.36
SSH1-207ENST00000547862 IKBKEQ14164 716 aa23.52■■□□□ 1.36
SSH1-207ENST00000547862 TRAF7Q6Q0C0 670 aa23.52■■□□□ 1.36
SSH1-207ENST00000547862 CASC1Q6TDU7 716 aa23.52■■□□□ 1.36
SSH1-207ENST00000547862 TRIM50Q86XT4 487 aa23.52■■□□□ 1.36
SSH1-207ENST00000547862 CTCFLQ8NI51 663 aaPredicted RBP23.52■■□□□ 1.36
SSH1-207ENST00000547862 ATP6V0A1Q93050 837 aa23.52■■□□□ 1.36
SSH1-207ENST00000547862 NLRC5Q86WI3 1866 aa23.51■■□□□ 1.35
SSH1-207ENST00000547862 ABHD14A-ACY1A0A1B0GW23 586 aa23.51■■□□□ 1.35
SSH1-207ENST00000547862 SMIM10L2AP0DMW4 78 aa23.51■■□□□ 1.35
SSH1-207ENST00000547862 SMIM10L2BP0DMW5 78 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms