RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 RTN1Q16799 776 aa30.42■■■□□ 2.46
SRSF9-202ENST00000546942 RBM28Q9NW13 759 aaKnown RBP30.42■■■□□ 2.46
SRSF9-202ENST00000546942 STXBP5LQ9Y2K9 1186 aa30.42■■■□□ 2.46
SRSF9-202ENST00000546942 KLF18A0A0U1RQI7 1052 aa30.41■■■□□ 2.46
SRSF9-202ENST00000546942 GRXCR1A8MXD5 290 aa30.41■■■□□ 2.46
SRSF9-202ENST00000546942 HSDL1Q3SXM5 330 aa30.41■■■□□ 2.46
SRSF9-202ENST00000546942 GNPTABQ3T906 1256 aa30.41■■■□□ 2.46
SRSF9-202ENST00000546942 DEFB128Q7Z7B8 93 aa30.41■■■□□ 2.46
SRSF9-202ENST00000546942 RPUSD2Q8IZ73 545 aaKnown RBP30.41■■■□□ 2.46
SRSF9-202ENST00000546942 C7orf31Q8N865 590 aa30.41■■■□□ 2.46
SRSF9-202ENST00000546942 JAKMIP1Q96N16 626 aaKnown RBP30.41■■■□□ 2.46
SRSF9-202ENST00000546942 BCAS3Q9H6U6 928 aa30.41■■■□□ 2.46
SRSF9-202ENST00000546942 FRMPD4Q14CM0 1322 aa30.41■■■□□ 2.46
SRSF9-202ENST00000546942 TRIP12Q14669 1992 aaPredicted RBP30.41■■■□□ 2.46
SRSF9-202ENST00000546942 PIK3CDO00329 1044 aa30.4■■■□□ 2.46
SRSF9-202ENST00000546942 HMGB1P09429 215 aaKnown RBP30.4■■■□□ 2.46
SRSF9-202ENST00000546942 MFSD10Q14728 455 aa30.4■■■□□ 2.46
SRSF9-202ENST00000546942 UBE2SQ16763 222 aa30.4■■■□□ 2.46
SRSF9-202ENST00000546942 GDF6Q6KF10 455 aaPredicted RBP30.4■■■□□ 2.46
SRSF9-202ENST00000546942 RETREG2Q8NC44 543 aa30.4■■■□□ 2.46
SRSF9-202ENST00000546942 TTYH1Q9H313 450 aaPredicted RBP30.4■■■□□ 2.46
SRSF9-202ENST00000546942 CXXC1Q9P0U4 656 aaPredicted RBP30.4■■■□□ 2.46
SRSF9-202ENST00000546942 GOLGA8AA7E2F4 631 aa30.39■■■□□ 2.46
SRSF9-202ENST00000546942 GOLGA8BA8MQT2 603 aa30.39■■■□□ 2.46
SRSF9-202ENST00000546942 KIAA0753Q2KHM9 967 aa30.39■■■□□ 2.46
SRSF9-202ENST00000546942 RASIP1Q5U651 963 aa30.39■■■□□ 2.46
SRSF9-202ENST00000546942 HERVK_113Q902F9 699 aa30.39■■■□□ 2.46
SRSF9-202ENST00000546942 KATNAL1Q9BW62 490 aa30.39■■■□□ 2.46
SRSF9-202ENST00000546942 HDAC6Q9UBN7 1215 aa30.39■■■□□ 2.46
SRSF9-202ENST00000546942 SNX14Q9Y5W7 946 aa30.39■■■□□ 2.46
SRSF9-202ENST00000546942 PPFIA4O75335 1185 aa30.38■■■□□ 2.45
SRSF9-202ENST00000546942 STAM2O75886 525 aa30.38■■■□□ 2.45
SRSF9-202ENST00000546942 DNAJB2P25686 324 aa30.38■■■□□ 2.45
SRSF9-202ENST00000546942 HSPA4P34932 840 aa30.38■■■□□ 2.45
SRSF9-202ENST00000546942 PCNX4Q63HM2 1172 aa30.38■■■□□ 2.45
SRSF9-202ENST00000546942 INPP4AQ96PE3 977 aaPredicted RBP30.38■■■□□ 2.45
SRSF9-202ENST00000546942 MTIF3Q9H2K0 278 aaKnown RBP30.38■■■□□ 2.45
SRSF9-202ENST00000546942 CNTNAP5Q8WYK1 1306 aa30.38■■■□□ 2.45
SRSF9-202ENST00000546942 SPATA31C2B4DYI2 1134 aa30.37■■■□□ 2.45
SRSF9-202ENST00000546942 BFSP2Q13515 415 aa30.37■■■□□ 2.45
SRSF9-202ENST00000546942 Q6ZUG5 572 aa30.37■■■□□ 2.45
SRSF9-202ENST00000546942 CYFIP1Q7L576 1253 aa30.37■■■□□ 2.45
SRSF9-202ENST00000546942 CDX2Q99626 313 aaPredicted RBP30.37■■■□□ 2.45
SRSF9-202ENST00000546942 ZBBXA8MT70 800 aa30.36■■■□□ 2.45
SRSF9-202ENST00000546942 NOP56O00567 594 aaKnown RBP30.36■■■□□ 2.45
SRSF9-202ENST00000546942 FIBPO43427 364 aa30.36■■■□□ 2.45
SRSF9-202ENST00000546942 REC8O95072 547 aa30.36■■■□□ 2.45
SRSF9-202ENST00000546942 F2P00734 622 aa30.36■■■□□ 2.45
SRSF9-202ENST00000546942 ICAM3P32942 547 aa30.36■■■□□ 2.45
SRSF9-202ENST00000546942 PBX2P40425 430 aa30.36■■■□□ 2.45
SRSF9-202ENST00000546942 APOBRQ0VD83 1088 aa30.36■■■□□ 2.45
SRSF9-202ENST00000546942 SEMA3FQ13275 785 aa30.36■■■□□ 2.45
SRSF9-202ENST00000546942 WWC2Q6AWC2 1192 aa30.36■■■□□ 2.45
SRSF9-202ENST00000546942 SESTD1Q86VW0 696 aa30.36■■■□□ 2.45
SRSF9-202ENST00000546942 SLC17A8Q8NDX2 589 aa30.36■■■□□ 2.45
SRSF9-202ENST00000546942 KCNB2Q92953 911 aa30.36■■■□□ 2.45
SRSF9-202ENST00000546942 VWCEQ96DN2 955 aa30.36■■■□□ 2.45
SRSF9-202ENST00000546942 GTF2IRD1Q9UHL9 959 aa30.36■■■□□ 2.45
SRSF9-202ENST00000546942 V9GY48 417 aaPredicted RBP30.36■■■□□ 2.45
SRSF9-202ENST00000546942 SPDYE3A6NKU9 549 aa30.35■■■□□ 2.45
SRSF9-202ENST00000546942 IQCF3P0C7M6 154 aa30.35■■■□□ 2.45
SRSF9-202ENST00000546942 NAPAP54920 295 aa30.35■■■□□ 2.45
SRSF9-202ENST00000546942 NEDD9Q14511 834 aa30.35■■■□□ 2.45
SRSF9-202ENST00000546942 BLOC1S2Q6QNY1 142 aa30.35■■■□□ 2.45
SRSF9-202ENST00000546942 PBX4Q9BYU1 374 aa30.35■■■□□ 2.45
SRSF9-202ENST00000546942 HAS3O00219 553 aa30.34■■■□□ 2.45
SRSF9-202ENST00000546942 PITPNM1O00562 1244 aa30.34■■■□□ 2.45
SRSF9-202ENST00000546942 HOXD8P13378 290 aaPredicted RBP30.34■■■□□ 2.45
SRSF9-202ENST00000546942 CDC27P30260 824 aa30.34■■■□□ 2.45
SRSF9-202ENST00000546942 SP4Q02446 784 aa30.34■■■□□ 2.45
SRSF9-202ENST00000546942 XRRA1Q6P2D8 792 aa30.34■■■□□ 2.45
SRSF9-202ENST00000546942 NLRX1Q86UT6 975 aa30.34■■■□□ 2.45
SRSF9-202ENST00000546942 CCDC155Q8N6L0 562 aa30.34■■■□□ 2.45
SRSF9-202ENST00000546942 BRF1Q92994 677 aa30.34■■■□□ 2.45
SRSF9-202ENST00000546942 TIFAQ96CG3 184 aa30.34■■■□□ 2.45
SRSF9-202ENST00000546942 GBF1Q92538 1859 aa30.33■■■□□ 2.45
SRSF9-202ENST00000546942 TANC1Q9C0D5 1861 aa30.33■■■□□ 2.45
SRSF9-202ENST00000546942 ZNF200P98182 395 aaPredicted RBP30.33■■■□□ 2.45
SRSF9-202ENST00000546942 FUT2Q10981 343 aa30.33■■■□□ 2.45
SRSF9-202ENST00000546942 MYLIPQ8WY64 445 aa30.33■■■□□ 2.45
SRSF9-202ENST00000546942 CTAGE1Q96RT6 745 aa30.33■■■□□ 2.45
SRSF9-202ENST00000546942 FTOQ9C0B1 505 aaKnown RBP eCLIP30.33■■■□□ 2.452e-8■□□□□ 9
SRSF9-202ENST00000546942 FAM217BQ9NTX9 383 aaPredicted RBP30.33■■■□□ 2.45
SRSF9-202ENST00000546942 PCDHA6Q9UN73 950 aa30.33■■■□□ 2.45
SRSF9-202ENST00000546942 PCDHA8Q9Y5H6 950 aa30.33■■■□□ 2.45
SRSF9-202ENST00000546942 SLC4A7Q9Y6M7 1214 aa30.33■■■□□ 2.45
SRSF9-202ENST00000546942 CDH23Q9H251 3354 aa30.32■■■□□ 2.44
SRSF9-202ENST00000546942 ADD1P35611 737 aaKnown RBP30.32■■■□□ 2.44
SRSF9-202ENST00000546942 METAP2P50579 478 aaKnown RBP eCLIP30.32■■■□□ 2.44
SRSF9-202ENST00000546942 C16orf70Q9BSU1 422 aa30.32■■■□□ 2.44
SRSF9-202ENST00000546942 RFC2P35250 354 aa30.31■■■□□ 2.44
SRSF9-202ENST00000546942 TYW1BQ6NUM6 668 aa30.31■■■□□ 2.44
SRSF9-202ENST00000546942 METTL7BQ6UX53 244 aa30.31■■■□□ 2.44
SRSF9-202ENST00000546942 CAGE1Q8TC20 777 aa30.31■■■□□ 2.44
SRSF9-202ENST00000546942 DHX38Q92620 1227 aaKnown RBP30.31■■■□□ 2.44
SRSF9-202ENST00000546942 PPP4R2Q9NY27 417 aa30.31■■■□□ 2.44
SRSF9-202ENST00000546942 PKD2L1Q9P0L9 805 aa30.31■■■□□ 2.44
SRSF9-202ENST00000546942 TELO2Q9Y4R8 837 aa30.31■■■□□ 2.44
SRSF9-202ENST00000546942 TMEM265A0A087WTH1 108 aa30.3■■■□□ 2.44
SRSF9-202ENST00000546942 H3BRB1 525 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms