RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 MPOP05164 745 aa8.55□□□□□ -1.04
NPAS3-204ENST00000546849 KRT15P19012 456 aa8.55□□□□□ -1.04
NPAS3-204ENST00000546849 TMEM62Q0P6H9 643 aa8.55□□□□□ -1.04
NPAS3-204ENST00000546849 C16orf59Q7L2K0 433 aa8.55□□□□□ -1.04
NPAS3-204ENST00000546849 KRT26Q7Z3Y9 468 aa8.55□□□□□ -1.04
NPAS3-204ENST00000546849 THNSL2Q86YJ6 484 aa8.55□□□□□ -1.04
NPAS3-204ENST00000546849 Q8N1Y9 231 aa8.55□□□□□ -1.04
NPAS3-204ENST00000546849 UBR7Q8N806 425 aa8.55□□□□□ -1.04
NPAS3-204ENST00000546849 C2orf69Q8N8R5 385 aa8.55□□□□□ -1.04
NPAS3-204ENST00000546849 NETO2Q8NC67 525 aa8.55□□□□□ -1.04
NPAS3-204ENST00000546849 PLEKHO2Q8TD55 490 aa8.55□□□□□ -1.04
NPAS3-204ENST00000546849 YBX2Q9Y2T7 364 aaKnown RBP8.55□□□□□ -1.04
NPAS3-204ENST00000546849 A0A087X0B3 334 aa8.54□□□□□ -1.04
NPAS3-204ENST00000546849 NOTOA8MTQ0 251 aa8.54□□□□□ -1.04
NPAS3-204ENST00000546849 NUDT19A8MXV4 375 aa8.54□□□□□ -1.04
NPAS3-204ENST00000546849 M0R2C6 588 aa8.54□□□□□ -1.04
NPAS3-204ENST00000546849 GAS7O60861 476 aa8.54□□□□□ -1.04
NPAS3-204ENST00000546849 PPP1R11O60927 126 aaPredicted RBP8.54□□□□□ -1.04
NPAS3-204ENST00000546849 RAB3GAP1Q15042 981 aa8.54□□□□□ -1.04
NPAS3-204ENST00000546849 STEAP3Q658P3 488 aa8.54□□□□□ -1.04
NPAS3-204ENST00000546849 OLFML2BQ68BL8 750 aa8.54□□□□□ -1.04
NPAS3-204ENST00000546849 MPZL3Q6UWV2 235 aa8.54□□□□□ -1.04
NPAS3-204ENST00000546849 DDX46Q7L014 1031 aaKnown RBP8.54□□□□□ -1.04
NPAS3-204ENST00000546849 ZSWIM9Q86XI8 627 aa8.54□□□□□ -1.04
NPAS3-204ENST00000546849 OR2W6PQ8NHA6 318 aa8.54□□□□□ -1.04
NPAS3-204ENST00000546849 PEX11GQ96HA9 241 aa8.54□□□□□ -1.04
NPAS3-204ENST00000546849 BTBD11A6QL63 1104 aa8.53□□□□□ -1.04
NPAS3-204ENST00000546849 PPM1GO15355 546 aaPredicted RBP8.53□□□□□ -1.04
NPAS3-204ENST00000546849 CYBBP04839 570 aa8.53□□□□□ -1.04
NPAS3-204ENST00000546849 VIL1P09327 827 aaKnown RBP8.53□□□□□ -1.04
NPAS3-204ENST00000546849 COL6A2P12110 1019 aa8.53□□□□□ -1.04
NPAS3-204ENST00000546849 SCNN1BP51168 640 aa8.53□□□□□ -1.04
NPAS3-204ENST00000546849 IGBP1P78318 339 aa8.53□□□□□ -1.04
NPAS3-204ENST00000546849 NR1I3Q14994 352 aa8.53□□□□□ -1.04
NPAS3-204ENST00000546849 TMEM177Q53S58 311 aa8.53□□□□□ -1.04
NPAS3-204ENST00000546849 PAQR3Q6TCH7 311 aa8.53□□□□□ -1.04
NPAS3-204ENST00000546849 ANKRD13AQ8IZ07 590 aa8.53□□□□□ -1.04
NPAS3-204ENST00000546849 PIP4K2CQ8TBX8 421 aa8.53□□□□□ -1.04
NPAS3-204ENST00000546849 SEC14L1Q92503 715 aa8.53□□□□□ -1.04
NPAS3-204ENST00000546849 USP7Q93009 1102 aa8.53□□□□□ -1.04
NPAS3-204ENST00000546849 INTS4Q96HW7 963 aaKnown RBP8.53□□□□□ -1.04
NPAS3-204ENST00000546849 SP110Q9HB58 689 aa8.53□□□□□ -1.04
NPAS3-204ENST00000546849 MCM8Q9UJA3 840 aa8.53□□□□□ -1.04
NPAS3-204ENST00000546849 OR14I1A6ND48 311 aa8.52□□□□□ -1.05
NPAS3-204ENST00000546849 F8W031 263 aaPredicted RBP8.52□□□□□ -1.05
NPAS3-204ENST00000546849 WNT9AO14904 365 aa8.52□□□□□ -1.05
NPAS3-204ENST00000546849 GLRX3O76003 335 aaKnown RBP8.52□□□□□ -1.05
NPAS3-204ENST00000546849 GLI1P08151 1106 aa8.52□□□□□ -1.05
NPAS3-204ENST00000546849 PDE6AP16499 860 aa8.52□□□□□ -1.05
NPAS3-204ENST00000546849 NFKB2Q00653 900 aa8.52□□□□□ -1.05
NPAS3-204ENST00000546849 GPR19Q15760 415 aa8.52□□□□□ -1.05
NPAS3-204ENST00000546849 FYB2Q5VWT5 728 aa8.52□□□□□ -1.05
NPAS3-204ENST00000546849 PKN3Q6P5Z2 889 aa8.52□□□□□ -1.05
NPAS3-204ENST00000546849 OTOP3Q7RTS5 596 aa8.52□□□□□ -1.05
NPAS3-204ENST00000546849 ANKLE2Q86XL3 938 aa8.52□□□□□ -1.05
NPAS3-204ENST00000546849 CHST14Q8NCH0 376 aa8.52□□□□□ -1.05
NPAS3-204ENST00000546849 ATL2Q8NHH9 583 aa8.52□□□□□ -1.05
NPAS3-204ENST00000546849 YIPF4Q9BSR8 244 aa8.52□□□□□ -1.05
NPAS3-204ENST00000546849 TNFRSF12AQ9NP84 129 aa8.52□□□□□ -1.05
NPAS3-204ENST00000546849 DSEQ9UL01 958 aa8.52□□□□□ -1.05
NPAS3-204ENST00000546849 NOP58Q9Y2X3 529 aaKnown RBP8.52□□□□□ -1.05
NPAS3-204ENST00000546849 HGSO14964 777 aaPredicted RBP8.51□□□□□ -1.05
NPAS3-204ENST00000546849 SRGAP3O43295 1099 aa8.51□□□□□ -1.05
NPAS3-204ENST00000546849 KRT37O76014 449 aa8.51□□□□□ -1.05
NPAS3-204ENST00000546849 CKMP06732 381 aa8.51□□□□□ -1.05
NPAS3-204ENST00000546849 DBHP09172 617 aa8.51□□□□□ -1.05
NPAS3-204ENST00000546849 GLI4P10075 376 aa8.51□□□□□ -1.05
NPAS3-204ENST00000546849 POU3F2P20265 443 aaPredicted RBP8.51□□□□□ -1.05
NPAS3-204ENST00000546849 SLC6A11P48066 632 aa8.51□□□□□ -1.05
NPAS3-204ENST00000546849 PCBP1Q15365 356 aaKnown RBP eCLIP8.51□□□□□ -1.05
NPAS3-204ENST00000546849 ABHD17CQ6PCB6 329 aa8.51□□□□□ -1.05
NPAS3-204ENST00000546849 ARHGAP36Q6ZRI8 547 aa8.51□□□□□ -1.05
NPAS3-204ENST00000546849 RNF180Q86T96 592 aa8.51□□□□□ -1.05
NPAS3-204ENST00000546849 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.51□□□□□ -1.05
NPAS3-204ENST00000546849 RXFP1Q9HBX9 757 aa8.51□□□□□ -1.05
NPAS3-204ENST00000546849 SLC6A20Q9NP91 592 aa8.51□□□□□ -1.05
NPAS3-204ENST00000546849 PCDH12Q9NPG4 1184 aa8.51□□□□□ -1.05
NPAS3-204ENST00000546849 FBLN5Q9UBX5 448 aa8.51□□□□□ -1.05
NPAS3-204ENST00000546849 CBLCQ9ULV8 474 aa8.51□□□□□ -1.05
NPAS3-204ENST00000546849 PCDHB4Q9Y5E5 795 aa8.51□□□□□ -1.05
NPAS3-204ENST00000546849 ZC3H12DA2A288 527 aaKnown RBP8.5□□□□□ -1.05
NPAS3-204ENST00000546849 ABLIM1O14639 778 aa8.5□□□□□ -1.05
NPAS3-204ENST00000546849 HIP1RO75146 1068 aa8.5□□□□□ -1.05
NPAS3-204ENST00000546849 SDHBP21912 280 aa8.5□□□□□ -1.05
NPAS3-204ENST00000546849 ERVFRD-1P60508 538 aa8.5□□□□□ -1.05
NPAS3-204ENST00000546849 IL2P60568 153 aa8.5□□□□□ -1.05
NPAS3-204ENST00000546849 STRN3Q13033 797 aa8.5□□□□□ -1.05
NPAS3-204ENST00000546849 NLGN4XQ8N0W4 816 aa8.5□□□□□ -1.05
NPAS3-204ENST00000546849 SHISA4Q96DD7 197 aa8.5□□□□□ -1.05
NPAS3-204ENST00000546849 BRINP2Q9C0B6 783 aa8.5□□□□□ -1.05
NPAS3-204ENST00000546849 CDIP1Q9H305 208 aa8.5□□□□□ -1.05
NPAS3-204ENST00000546849 RNF114Q9Y508 228 aa8.5□□□□□ -1.05
NPAS3-204ENST00000546849 CBX4O00257 560 aa8.49□□□□□ -1.05
NPAS3-204ENST00000546849 EFEMP2O95967 443 aa8.49□□□□□ -1.05
NPAS3-204ENST00000546849 HMGB1P09429 215 aaKnown RBP8.49□□□□□ -1.05
NPAS3-204ENST00000546849 OCRLQ01968 901 aa8.49□□□□□ -1.05
NPAS3-204ENST00000546849 ARHGAP44Q17R89 818 aa8.49□□□□□ -1.05
NPAS3-204ENST00000546849 CYP4F22Q6NT55 531 aa8.49□□□□□ -1.05
NPAS3-204ENST00000546849 CBLL1Q75N03 491 aa8.49□□□□□ -1.05
NPAS3-204ENST00000546849 MILR1Q7Z6M3 343 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms