RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 GNEQ9Y223 722 aaKnown RBP15.66■□□□□ 0.1
PTCH1-213ENST00000546820 GH1P01241 217 aa15.65■□□□□ 0.1
PTCH1-213ENST00000546820 MYCNP04198 464 aaPredicted RBP15.65■□□□□ 0.1
PTCH1-213ENST00000546820 ITGB5P18084 799 aa15.65■□□□□ 0.1
PTCH1-213ENST00000546820 GJA9P57773 515 aa15.65■□□□□ 0.1
PTCH1-213ENST00000546820 INF2Q27J81 1249 aa15.65■□□□□ 0.1
PTCH1-213ENST00000546820 MOXD1Q6UVY6 613 aa15.65■□□□□ 0.1
PTCH1-213ENST00000546820 TLK2Q86UE8 772 aa15.65■□□□□ 0.1
PTCH1-213ENST00000546820 PLA2G4DQ86XP0 818 aa15.65■□□□□ 0.1
PTCH1-213ENST00000546820 DHX37Q8IY37 1157 aaKnown RBP15.65■□□□□ 0.1
PTCH1-213ENST00000546820 OR6J1Q8NGC5 347 aa15.65■□□□□ 0.1
PTCH1-213ENST00000546820 SENP7Q9BQF6 1050 aa15.65■□□□□ 0.1
PTCH1-213ENST00000546820 MLXIPQ9HAP2 919 aa15.65■□□□□ 0.1
PTCH1-213ENST00000546820 KBTBD13C9JR72 458 aa15.64■□□□□ 0.09
PTCH1-213ENST00000546820 PGK1P00558 417 aa15.64■□□□□ 0.09
PTCH1-213ENST00000546820 C6orf222P0C671 652 aaPredicted RBP15.64■□□□□ 0.09
PTCH1-213ENST00000546820 GCFC2P16383 781 aaKnown RBP15.64■□□□□ 0.09
PTCH1-213ENST00000546820 U2AF2P26368 475 aaKnown RBP eCLIP15.64■□□□□ 0.09
PTCH1-213ENST00000546820 CPT1AP50416 773 aa15.64■□□□□ 0.09
PTCH1-213ENST00000546820 SETQ01105 290 aaPredicted RBP15.64■□□□□ 0.09
PTCH1-213ENST00000546820 LETM2Q2VYF4 491 aa15.64■□□□□ 0.09
PTCH1-213ENST00000546820 GNASQ5JWF2 1037 aa15.64■□□□□ 0.09
PTCH1-213ENST00000546820 PPP4R3AQ6IN85 833 aa15.64■□□□□ 0.09
PTCH1-213ENST00000546820 NOSTRINQ8IVI9 506 aa15.64■□□□□ 0.09
PTCH1-213ENST00000546820 PCSK9Q8NBP7 692 aaKnown RBP15.64■□□□□ 0.09
PTCH1-213ENST00000546820 TNFRSF25Q93038 417 aa15.64■□□□□ 0.09
PTCH1-213ENST00000546820 UPF3AQ9H1J1 476 aaKnown RBP15.64■□□□□ 0.09
PTCH1-213ENST00000546820 KCNH7Q9NS40 1196 aa15.64■□□□□ 0.09
PTCH1-213ENST00000546820 NOL7Q9UMY1 257 aaKnown RBP15.64■□□□□ 0.09
PTCH1-213ENST00000546820 KIAA1217Q5T5P2 1943 aa15.64■□□□□ 0.09
PTCH1-213ENST00000546820 CYP3A7-CYP3A51PA0A087WV96 503 aa15.63■□□□□ 0.09
PTCH1-213ENST00000546820 POTEFA5A3E0 1075 aa15.63■□□□□ 0.09
PTCH1-213ENST00000546820 FAM86B1E9PN63 330 aa15.63■□□□□ 0.09
PTCH1-213ENST00000546820 CCNT1O60563 726 aaKnown RBP15.63■□□□□ 0.09
PTCH1-213ENST00000546820 ARIH2O95376 493 aa15.63■□□□□ 0.09
PTCH1-213ENST00000546820 GGPS1O95749 300 aa15.63■□□□□ 0.09
PTCH1-213ENST00000546820 FAM86B2P0C5J1 330 aa15.63■□□□□ 0.09
PTCH1-213ENST00000546820 EN2P19622 333 aaPredicted RBP15.63■□□□□ 0.09
PTCH1-213ENST00000546820 CYP3A7P24462 503 aa15.63■□□□□ 0.09
PTCH1-213ENST00000546820 NKX3-2P78367 333 aa15.63■□□□□ 0.09
PTCH1-213ENST00000546820 PRR16Q569H4 304 aa15.63■□□□□ 0.09
PTCH1-213ENST00000546820 CELF3Q5SZQ8 465 aaKnown RBP15.63■□□□□ 0.09
PTCH1-213ENST00000546820 SPRYD3Q8NCJ5 442 aa15.63■□□□□ 0.09
PTCH1-213ENST00000546820 CYP2W1Q8TAV3 490 aa15.63■□□□□ 0.09
PTCH1-213ENST00000546820 SDF4Q9BRK5 362 aa15.63■□□□□ 0.09
PTCH1-213ENST00000546820 TSEN34Q9BSV6 310 aaKnown RBP15.63■□□□□ 0.09
PTCH1-213ENST00000546820 DAXXQ9UER7 740 aaPredicted RBP15.63■□□□□ 0.09
PTCH1-213ENST00000546820 VPS37CA5D8V6 355 aaPredicted RBP15.62■□□□□ 0.09
PTCH1-213ENST00000546820 DNM1LO00429 736 aa15.62■□□□□ 0.09
PTCH1-213ENST00000546820 ADCY6O43306 1168 aa15.62■□□□□ 0.09
PTCH1-213ENST00000546820 MARCH6O60337 910 aa15.62■□□□□ 0.09
PTCH1-213ENST00000546820 KPNA6O60684 536 aa15.62■□□□□ 0.09
PTCH1-213ENST00000546820 ADAMTS4O75173 837 aa15.62■□□□□ 0.09
PTCH1-213ENST00000546820 ARP10275 920 aa15.62■□□□□ 0.09
PTCH1-213ENST00000546820 SYT1P21579 422 aa15.62■□□□□ 0.09
PTCH1-213ENST00000546820 UBA1P22314 1058 aaKnown RBP15.62■□□□□ 0.09
PTCH1-213ENST00000546820 ANP32AP39687 249 aaKnown RBP15.62■□□□□ 0.09
PTCH1-213ENST00000546820 SOX10P56693 466 aa15.62■□□□□ 0.09
PTCH1-213ENST00000546820 SP2Q02086 613 aa15.62■□□□□ 0.09
PTCH1-213ENST00000546820 LRRC41Q15345 812 aa15.62■□□□□ 0.09
PTCH1-213ENST00000546820 FSCN1Q16658 493 aaKnown RBP15.62■□□□□ 0.09
PTCH1-213ENST00000546820 Q4G0T1 1027 aa15.62■□□□□ 0.09
PTCH1-213ENST00000546820 TMEM63BQ5T3F8 832 aa15.62■□□□□ 0.09
PTCH1-213ENST00000546820 GJC2Q5T442 439 aaPredicted RBP15.62■□□□□ 0.09
PTCH1-213ENST00000546820 MYSM1Q5VVJ2 828 aa15.62■□□□□ 0.09
PTCH1-213ENST00000546820 KLHDC9Q8NEP7 349 aa15.62■□□□□ 0.09
PTCH1-213ENST00000546820 COPS5Q92905 334 aa15.62■□□□□ 0.09
PTCH1-213ENST00000546820 EMID1Q96A84 441 aaPredicted RBP15.62■□□□□ 0.09
PTCH1-213ENST00000546820 LENG1Q96BZ8 264 aaPredicted RBP15.62■□□□□ 0.09
PTCH1-213ENST00000546820 ZNF577Q9BSK1 485 aa15.62■□□□□ 0.09
PTCH1-213ENST00000546820 AGO4Q9HCK5 861 aaKnown RBP15.62■□□□□ 0.09
PTCH1-213ENST00000546820 TBC1D22BQ9NU19 505 aa15.62■□□□□ 0.09
PTCH1-213ENST00000546820 DDX25Q9UHL0 483 aaKnown RBP15.62■□□□□ 0.09
PTCH1-213ENST00000546820 TCEAL9Q9UHQ7 104 aa15.62■□□□□ 0.09
PTCH1-213ENST00000546820 SYNRGQ9UMZ2 1314 aa15.62■□□□□ 0.09
PTCH1-213ENST00000546820 MYH7BA7E2Y1 1941 aa15.61■□□□□ 0.09
PTCH1-213ENST00000546820 IGLV3-22A0A075B6J6 115 aa15.61■□□□□ 0.09
PTCH1-213ENST00000546820 NOP56O00567 594 aaKnown RBP15.61■□□□□ 0.09
PTCH1-213ENST00000546820 BAG4O95429 457 aaKnown RBP15.61■□□□□ 0.09
PTCH1-213ENST00000546820 CST5P28325 142 aaPredicted RBP15.61■□□□□ 0.09
PTCH1-213ENST00000546820 TRAPPC10P48553 1259 aa15.61■□□□□ 0.09
PTCH1-213ENST00000546820 SEMA3FQ13275 785 aa15.61■□□□□ 0.09
PTCH1-213ENST00000546820 KCNA10Q16322 511 aa15.61■□□□□ 0.09
PTCH1-213ENST00000546820 EARS2Q5JPH6 523 aaKnown RBP15.61■□□□□ 0.09
PTCH1-213ENST00000546820 METTL7BQ6UX53 244 aa15.61■□□□□ 0.09
PTCH1-213ENST00000546820 CYFIP1Q7L576 1253 aa15.61■□□□□ 0.09
PTCH1-213ENST00000546820 SPATA33Q96N06 139 aa15.61■□□□□ 0.09
PTCH1-213ENST00000546820 POLR3EQ9NVU0 708 aa15.61■□□□□ 0.09
PTCH1-213ENST00000546820 KIAA0100Q14667 2235 aaKnown RBP15.6■□□□□ 0.09
PTCH1-213ENST00000546820 MOXD2PA6NHM9 499 aa15.6■□□□□ 0.09
PTCH1-213ENST00000546820 A6NJR5 290 aa15.6■□□□□ 0.09
PTCH1-213ENST00000546820 IPO5O00410 1097 aaKnown RBP15.6■□□□□ 0.09
PTCH1-213ENST00000546820 STX6O43752 255 aa15.6■□□□□ 0.09
PTCH1-213ENST00000546820 ATP9AO75110 1047 aa15.6■□□□□ 0.09
PTCH1-213ENST00000546820 PPFIA4O75335 1185 aa15.6■□□□□ 0.09
PTCH1-213ENST00000546820 TDP2O95551 362 aa15.6■□□□□ 0.09
PTCH1-213ENST00000546820 KCNA2P16389 499 aa15.6■□□□□ 0.09
PTCH1-213ENST00000546820 ATP2B1P20020 1258 aa15.6■□□□□ 0.09
PTCH1-213ENST00000546820 ARHGAP1Q07960 439 aa15.6■□□□□ 0.09
PTCH1-213ENST00000546820 DGKDQ16760 1214 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms