RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 CCDC85BQ15834 202 aaPredicted RBP21.63■■□□□ 1.05
CHERP-204ENST00000546538 TMEM67Q5HYA8 995 aa21.63■■□□□ 1.05
CHERP-204ENST00000546538 RALYLQ86SE5 291 aaKnown RBP21.63■■□□□ 1.05
CHERP-204ENST00000546538 FCHSD1Q86WN1 690 aa21.63■■□□□ 1.05
CHERP-204ENST00000546538 RETREG2Q8NC44 543 aa21.63■■□□□ 1.05
CHERP-204ENST00000546538 PIBF1Q8WXW3 757 aa21.63■■□□□ 1.05
CHERP-204ENST00000546538 ALG1Q9BT22 464 aa21.63■■□□□ 1.05
CHERP-204ENST00000546538 NOD1Q9Y239 953 aa21.63■■□□□ 1.05
CHERP-204ENST00000546538 TELO2Q9Y4R8 837 aa21.63■■□□□ 1.05
CHERP-204ENST00000546538 PRRC2BQ5JSZ5 2229 aaKnown RBP21.63■■□□□ 1.05
CHERP-204ENST00000546538 GCOM1H8Y6P7 765 aaPredicted RBP21.63■■□□□ 1.05
CHERP-204ENST00000546538 RFXAPO00287 272 aa21.63■■□□□ 1.05
CHERP-204ENST00000546538 NBNO60934 754 aa21.63■■□□□ 1.05
CHERP-204ENST00000546538 GGPS1O95749 300 aa21.63■■□□□ 1.05
CHERP-204ENST00000546538 POLR2MP0CAP2 368 aa21.63■■□□□ 1.05
CHERP-204ENST00000546538 MBTPS1Q14703 1052 aa21.63■■□□□ 1.05
CHERP-204ENST00000546538 KIAA0753Q2KHM9 967 aa21.63■■□□□ 1.05
CHERP-204ENST00000546538 TMCO2Q7Z6W1 182 aaPredicted RBP21.63■■□□□ 1.05
CHERP-204ENST00000546538 DHX37Q8IY37 1157 aaKnown RBP21.63■■□□□ 1.05
CHERP-204ENST00000546538 CAGE1Q8TC20 777 aa21.63■■□□□ 1.05
CHERP-204ENST00000546538 AFAP1L1Q8TED9 768 aa21.63■■□□□ 1.05
CHERP-204ENST00000546538 C16orf70Q9BSU1 422 aa21.63■■□□□ 1.05
CHERP-204ENST00000546538 LSG1Q9H089 658 aaKnown RBP21.63■■□□□ 1.05
CHERP-204ENST00000546538 DOCK5Q9H7D0 1870 aa21.62■■□□□ 1.05
CHERP-204ENST00000546538 CKBP12277 381 aa21.62■■□□□ 1.05
CHERP-204ENST00000546538 IGFBP4P22692 258 aa21.62■■□□□ 1.05
CHERP-204ENST00000546538 SEMA3FQ13275 785 aa21.62■■□□□ 1.05
CHERP-204ENST00000546538 LRRC8DQ7L1W4 858 aa21.62■■□□□ 1.05
CHERP-204ENST00000546538 SKAP1Q86WV1 359 aa21.62■■□□□ 1.05
CHERP-204ENST00000546538 HERC6Q8IVU3 1022 aa21.62■■□□□ 1.05
CHERP-204ENST00000546538 SAMD3Q8N6K7 520 aa21.62■■□□□ 1.05
CHERP-204ENST00000546538 FTOQ9C0B1 505 aaKnown RBP eCLIP21.62■■□□□ 1.05
CHERP-204ENST00000546538 CXCL10P02778 98 aa21.61■■□□□ 1.05
CHERP-204ENST00000546538 SELPP16109 830 aa21.61■■□□□ 1.05
CHERP-204ENST00000546538 C7orf31Q8N865 590 aa21.61■■□□□ 1.05
CHERP-204ENST00000546538 SPATA33Q96N06 139 aa21.61■■□□□ 1.05
CHERP-204ENST00000546538 SLC9A7Q96T83 725 aa21.61■■□□□ 1.05
CHERP-204ENST00000546538 CERS4Q9HA82 394 aa21.61■■□□□ 1.05
CHERP-204ENST00000546538 ERICH2A1L162 156 aa21.6■■□□□ 1.05
CHERP-204ENST00000546538 BDP1A6H8Y1 2624 aa21.6■■□□□ 1.05
CHERP-204ENST00000546538 PPFIA4O75335 1185 aa21.6■■□□□ 1.05
CHERP-204ENST00000546538 ACTN1P12814 892 aa21.6■■□□□ 1.05
CHERP-204ENST00000546538 CCND2P30279 289 aa21.6■■□□□ 1.05
CHERP-204ENST00000546538 TAP1Q03518 808 aa21.6■■□□□ 1.05
CHERP-204ENST00000546538 CATIPQ7Z7H3 387 aa21.6■■□□□ 1.05
CHERP-204ENST00000546538 ZNF654Q8IZM8 581 aa21.6■■□□□ 1.05
CHERP-204ENST00000546538 PHOSPHO2Q8TCD6 241 aa21.6■■□□□ 1.05
CHERP-204ENST00000546538 LCHNA4D1U4 455 aa21.59■■□□□ 1.05
CHERP-204ENST00000546538 PLEKHA8P1O95397 391 aa21.59■■□□□ 1.05
CHERP-204ENST00000546538 WDR5P61964 334 aaKnown RBP21.59■■□□□ 1.05
CHERP-204ENST00000546538 DEFB103AP81534 67 aa21.59■■□□□ 1.05
CHERP-204ENST00000546538 TJAP1Q5JTD0 557 aa21.59■■□□□ 1.05
CHERP-204ENST00000546538 KRT40Q6A162 431 aa21.59■■□□□ 1.05
CHERP-204ENST00000546538 INPP4AQ96PE3 977 aaPredicted RBP21.59■■□□□ 1.05
CHERP-204ENST00000546538 SPZ1Q9BXG8 430 aa21.59■■□□□ 1.05
CHERP-204ENST00000546538 NCOR1O75376 2440 aa21.58■■□□□ 1.05
CHERP-204ENST00000546538 SH2B2O14492 632 aaPredicted RBP21.58■■□□□ 1.05
CHERP-204ENST00000546538 BAIAP3O94812 1187 aa21.58■■□□□ 1.05
CHERP-204ENST00000546538 TGFB3P10600 412 aa21.58■■□□□ 1.05
CHERP-204ENST00000546538 HOXC8P31273 242 aa21.58■■□□□ 1.05
CHERP-204ENST00000546538 PTK7Q13308 1070 aa21.58■■□□□ 1.05
CHERP-204ENST00000546538 SART3Q15020 963 aaKnown RBP21.58■■□□□ 1.05
CHERP-204ENST00000546538 ZNF618Q5T7W0 954 aa21.58■■□□□ 1.05
CHERP-204ENST00000546538 KCNV1Q6PIU1 500 aa21.58■■□□□ 1.05
CHERP-204ENST00000546538 USP17L6PQ6QN14 398 aa21.58■■□□□ 1.05
CHERP-204ENST00000546538 CMTR1Q8N1G2 835 aaKnown RBP21.58■■□□□ 1.05
CHERP-204ENST00000546538 MAP3K14Q99558 947 aa21.58■■□□□ 1.05
CHERP-204ENST00000546538 KATNAL1Q9BW62 490 aa21.58■■□□□ 1.05
CHERP-204ENST00000546538 MEIS2O14770 477 aa21.57■■□□□ 1.04
CHERP-204ENST00000546538 SLC27A2O14975 620 aa21.57■■□□□ 1.04
CHERP-204ENST00000546538 PRC1O43663 620 aa21.57■■□□□ 1.04
CHERP-204ENST00000546538 RXRAP19793 462 aa21.57■■□□□ 1.04
CHERP-204ENST00000546538 ICAM3P32942 547 aa21.57■■□□□ 1.04
CHERP-204ENST00000546538 SRBD1Q8N5C6 995 aaKnown RBP21.57■■□□□ 1.04
CHERP-204ENST00000546538 CCDC155Q8N6L0 562 aa21.57■■□□□ 1.04
CHERP-204ENST00000546538 OSBPL7Q9BZF2 842 aa21.57■■□□□ 1.04
CHERP-204ENST00000546538 SPATA31C2B4DYI2 1134 aa21.56■■□□□ 1.04
CHERP-204ENST00000546538 DDAH1O94760 285 aa21.56■■□□□ 1.04
CHERP-204ENST00000546538 MKRN4PQ13434 485 aaPredicted RBP21.56■■□□□ 1.04
CHERP-204ENST00000546538 ESYT1Q9BSJ8 1104 aa21.56■■□□□ 1.04
CHERP-204ENST00000546538 RTEL1Q9NZ71 1219 aa21.56■■□□□ 1.04
CHERP-204ENST00000546538 THEGQ9P2T0 379 aa21.56■■□□□ 1.04
CHERP-204ENST00000546538 MTCH2Q9Y6C9 303 aa21.56■■□□□ 1.04
CHERP-204ENST00000546538 COL4A4P53420 1690 aaPredicted RBP21.56■■□□□ 1.04
CHERP-204ENST00000546538 LGALS2P05162 132 aa21.55■■□□□ 1.04
CHERP-204ENST00000546538 POU3F3P20264 500 aaPredicted RBP21.55■■□□□ 1.04
CHERP-204ENST00000546538 NECTIN1Q15223 517 aa21.55■■□□□ 1.04
CHERP-204ENST00000546538 CNKSR3Q6P9H4 555 aa21.55■■□□□ 1.04
CHERP-204ENST00000546538 SERINC5Q86VE9 423 aa21.55■■□□□ 1.04
CHERP-204ENST00000546538 RAB11FIP4Q86YS3 637 aa21.55■■□□□ 1.04
CHERP-204ENST00000546538 ATXN2LQ8WWM7 1075 aaKnown RBP21.55■■□□□ 1.04
CHERP-204ENST00000546538 ASB2Q96Q27 587 aa21.55■■□□□ 1.04
CHERP-204ENST00000546538 LPXNO60711 386 aa21.55■■□□□ 1.04
CHERP-204ENST00000546538 TRAF1Q13077 416 aa21.55■■□□□ 1.04
CHERP-204ENST00000546538 TRIM50Q86XT4 487 aa21.55■■□□□ 1.04
CHERP-204ENST00000546538 ARNTL2Q8WYA1 636 aa21.55■■□□□ 1.04
CHERP-204ENST00000546538 LRRC2Q9BYS8 371 aa21.55■■□□□ 1.04
CHERP-204ENST00000546538 MLXIPQ9HAP2 919 aa21.55■■□□□ 1.04
CHERP-204ENST00000546538 hCG_1642624A0A1W2PR95 340 aa21.54■■□□□ 1.04
CHERP-204ENST00000546538 H3BRB1 525 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms