RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 PWP2Q15269 919 aaKnown RBP13.55□□□□□ -0.24
LTBR-214ENST00000545445 SAFBQ15424 915 aaKnown RBP eCLIP13.55□□□□□ -0.24
LTBR-214ENST00000545445 RASIP1Q5U651 963 aa13.55□□□□□ -0.24
LTBR-214ENST00000545445 TYW1BQ6NUM6 668 aa13.55□□□□□ -0.24
LTBR-214ENST00000545445 DAGLBQ8NCG7 672 aa13.55□□□□□ -0.24
LTBR-214ENST00000545445 FBXO18Q8NFZ0 1043 aa13.55□□□□□ -0.24
LTBR-214ENST00000545445 TOX2Q96NM4 488 aa13.55□□□□□ -0.24
LTBR-214ENST00000545445 AIFM3Q96NN9 605 aa13.55□□□□□ -0.24
LTBR-214ENST00000545445 TINF2Q9BSI4 451 aa13.55□□□□□ -0.24
LTBR-214ENST00000545445 PHF20Q9BVI0 1012 aa13.55□□□□□ -0.24
LTBR-214ENST00000545445 PCDHA4Q9UN74 947 aa13.55□□□□□ -0.24
LTBR-214ENST00000545445 DIS3Q9Y2L1 958 aaKnown RBP13.55□□□□□ -0.24
LTBR-214ENST00000545445 SYNRGQ9UMZ2 1314 aa13.55□□□□□ -0.24
LTBR-214ENST00000545445 MYH6P13533 1939 aa13.54□□□□□ -0.24
LTBR-214ENST00000545445 CHD7Q9P2D1 2997 aa13.54□□□□□ -0.24
LTBR-214ENST00000545445 DNAJC25-GNG10A0A024R161 153 aa13.54□□□□□ -0.24
LTBR-214ENST00000545445 MYADML2A6NDP7 307 aa13.54□□□□□ -0.24
LTBR-214ENST00000545445 AKR1A1P14550 325 aa13.54□□□□□ -0.24
LTBR-214ENST00000545445 CSF2RAP15509 400 aa13.54□□□□□ -0.24
LTBR-214ENST00000545445 AP3B2Q13367 1082 aa13.54□□□□□ -0.24
LTBR-214ENST00000545445 PPIGQ13427 754 aaKnown RBP eCLIP13.54□□□□□ -0.242e-18■□□□□ 9.5
LTBR-214ENST00000545445 BAATQ14032 418 aaPredicted RBP13.54□□□□□ -0.24
LTBR-214ENST00000545445 LARP1BQ659C4 914 aaKnown RBP13.54□□□□□ -0.24
LTBR-214ENST00000545445 KRT40Q6A162 431 aa13.54□□□□□ -0.24
LTBR-214ENST00000545445 MFSD5Q6N075 450 aa13.54□□□□□ -0.24
LTBR-214ENST00000545445 REXO1Q8N1G1 1221 aaKnown RBP13.54□□□□□ -0.24
LTBR-214ENST00000545445 DNERQ8NFT8 737 aa13.54□□□□□ -0.24
LTBR-214ENST00000545445 MPHOSPH6Q99547 160 aaKnown RBP13.54□□□□□ -0.24
LTBR-214ENST00000545445 NKX2-4Q9H2Z4 354 aa13.54□□□□□ -0.24
LTBR-214ENST00000545445 ADD3Q9UEY8 706 aaKnown RBP13.54□□□□□ -0.24
LTBR-214ENST00000545445 SPDYE3A6NKU9 549 aa13.53□□□□□ -0.24
LTBR-214ENST00000545445 B4DLN1 442 aa13.53□□□□□ -0.24
LTBR-214ENST00000545445 H3BQV1 296 aa13.53□□□□□ -0.24
LTBR-214ENST00000545445 MEIS2O14770 477 aa13.53□□□□□ -0.24
LTBR-214ENST00000545445 MMP1P03956 469 aa13.53□□□□□ -0.24
LTBR-214ENST00000545445 IRX5P78411 483 aaPredicted RBP13.53□□□□□ -0.24
LTBR-214ENST00000545445 ZNF792Q3KQV3 632 aa13.53□□□□□ -0.24
LTBR-214ENST00000545445 ZNF365Q70YC5 407 aa13.53□□□□□ -0.24
LTBR-214ENST00000545445 ZNF467Q7Z7K2 595 aaPredicted RBP13.53□□□□□ -0.24
LTBR-214ENST00000545445 BLIDQ8IZY5 108 aa13.53□□□□□ -0.24
LTBR-214ENST00000545445 MICALL1Q8N3F8 863 aa13.53□□□□□ -0.24
LTBR-214ENST00000545445 FAM133AQ8N9E0 248 aa13.53□□□□□ -0.24
LTBR-214ENST00000545445 SYTL5Q8TDW5 730 aaPredicted RBP13.53□□□□□ -0.24
LTBR-214ENST00000545445 TSEN34Q9BSV6 310 aaKnown RBP13.53□□□□□ -0.24
LTBR-214ENST00000545445 PPP1R12CQ9BZL4 782 aa13.53□□□□□ -0.24
LTBR-214ENST00000545445 EHMT1Q9H9B1 1298 aa13.53□□□□□ -0.24
LTBR-214ENST00000545445 MOXD2PA6NHM9 499 aa13.52□□□□□ -0.25
LTBR-214ENST00000545445 DTNBO60941 627 aa13.52□□□□□ -0.25
LTBR-214ENST00000545445 KRT2P35908 639 aa13.52□□□□□ -0.25
LTBR-214ENST00000545445 CLK2P49760 499 aaKnown RBP13.52□□□□□ -0.25
LTBR-214ENST00000545445 TFF2Q03403 129 aa13.52□□□□□ -0.25
LTBR-214ENST00000545445 RAB30Q15771 203 aa13.52□□□□□ -0.25
LTBR-214ENST00000545445 KCNA10Q16322 511 aa13.52□□□□□ -0.25
LTBR-214ENST00000545445 PSRC1Q6PGN9 363 aaPredicted RBP13.52□□□□□ -0.25
LTBR-214ENST00000545445 MSL3Q8N5Y2 521 aaKnown RBP13.52□□□□□ -0.25
LTBR-214ENST00000545445 NSUN6Q8TEA1 469 aaKnown RBP13.52□□□□□ -0.25
LTBR-214ENST00000545445 TBC1D5Q92609 795 aa13.52□□□□□ -0.25
LTBR-214ENST00000545445 C1QTNF1Q9BXJ1 281 aa13.52□□□□□ -0.25
LTBR-214ENST00000545445 FOXP1Q9H334 677 aaPredicted RBP13.52□□□□□ -0.25
LTBR-214ENST00000545445 FOXD4L1Q9NU39 408 aa13.52□□□□□ -0.25
LTBR-214ENST00000545445 CXXC1Q9P0U4 656 aaPredicted RBP13.52□□□□□ -0.25
LTBR-214ENST00000545445 MSRAQ9UJ68 235 aa13.52□□□□□ -0.25
LTBR-214ENST00000545445 KCNJ14Q9UNX9 436 aa13.52□□□□□ -0.25
LTBR-214ENST00000545445 CNPY2Q9Y2B0 182 aa13.52□□□□□ -0.25
LTBR-214ENST00000545445 YBX2Q9Y2T7 364 aaKnown RBP13.52□□□□□ -0.25
LTBR-214ENST00000545445 REV3LO60673 3130 aa13.51□□□□□ -0.25
LTBR-214ENST00000545445 SYT1P21579 422 aa13.51□□□□□ -0.25
LTBR-214ENST00000545445 HOXA13P31271 388 aaPredicted RBP13.51□□□□□ -0.25
LTBR-214ENST00000545445 NPY5RQ15761 445 aa13.51□□□□□ -0.25
LTBR-214ENST00000545445 CCSAPQ6IQ19 270 aaPredicted RBP13.51□□□□□ -0.25
LTBR-214ENST00000545445 USP17L6PQ6QN14 398 aa13.51□□□□□ -0.25
LTBR-214ENST00000545445 SLC30A10Q6XR72 485 aa13.51□□□□□ -0.25
LTBR-214ENST00000545445 DIS3L2Q8IYB7 885 aaKnown RBP13.51□□□□□ -0.25
LTBR-214ENST00000545445 TMEM199Q8N511 208 aa13.51□□□□□ -0.25
LTBR-214ENST00000545445 KLHDC9Q8NEP7 349 aa13.51□□□□□ -0.25
LTBR-214ENST00000545445 IWS1Q96ST2 819 aa13.51□□□□□ -0.25
LTBR-214ENST00000545445 ZHX1Q9UKY1 873 aaPredicted RBP13.51□□□□□ -0.25
LTBR-214ENST00000545445 NCOR1O75376 2440 aa13.51□□□□□ -0.25
LTBR-214ENST00000545445 PLXNA1Q9UIW2 1896 aa13.5□□□□□ -0.25
LTBR-214ENST00000545445 MROH7Q68CQ1 1323 aa13.5□□□□□ -0.25
LTBR-214ENST00000545445 ASB14A6NK59 587 aa13.5□□□□□ -0.25
LTBR-214ENST00000545445 M0R2N6 131 aa13.5□□□□□ -0.25
LTBR-214ENST00000545445 BMP1P13497 986 aa13.5□□□□□ -0.25
LTBR-214ENST00000545445 CYP2C18P33260 490 aa13.5□□□□□ -0.25
LTBR-214ENST00000545445 KCNQ1P51787 676 aa13.5□□□□□ -0.25
LTBR-214ENST00000545445 GNL2Q13823 731 aaKnown RBP13.5□□□□□ -0.25
LTBR-214ENST00000545445 UBE2SQ16763 222 aa13.5□□□□□ -0.25
LTBR-214ENST00000545445 XRRA1Q6P2D8 792 aa13.5□□□□□ -0.25
LTBR-214ENST00000545445 KRT25Q7Z3Z0 450 aa13.5□□□□□ -0.25
LTBR-214ENST00000545445 FCHSD1Q86WN1 690 aa13.5□□□□□ -0.25
LTBR-214ENST00000545445 SPRYD3Q8NCJ5 442 aa13.5□□□□□ -0.25
LTBR-214ENST00000545445 GLT1D1Q96MS3 346 aa13.5□□□□□ -0.25
LTBR-214ENST00000545445 RMDN3Q96TC7 470 aa13.5□□□□□ -0.25
LTBR-214ENST00000545445 GJB4Q9NTQ9 266 aa13.5□□□□□ -0.25
LTBR-214ENST00000545445 PCDHA6Q9UN73 950 aa13.5□□□□□ -0.25
LTBR-214ENST00000545445 PCDHA8Q9Y5H6 950 aa13.5□□□□□ -0.25
LTBR-214ENST00000545445 SMCHD1A6NHR9 2005 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 FRMPD4Q14CM0 1322 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 CCDC194A0A1B0GVG4 234 aa13.49□□□□□ -0.25
LTBR-214ENST00000545445 STX6O43752 255 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms