RNA–Protein interactions for RNA: ENST00000545224.5

SRRM4-203, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-203ENST00000545224 JADE2Q9NQC1 790 aa12.94□□□□□ -0.34
SRRM4-203ENST00000545224 RTEL1Q9NZ71 1219 aa12.94□□□□□ -0.34
SRRM4-203ENST00000545224 RANBP2P49792 3224 aaKnown RBP12.93□□□□□ -0.34
SRRM4-203ENST00000545224 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.93□□□□□ -0.34
SRRM4-203ENST00000545224 VPS37CA5D8V6 355 aaPredicted RBP12.93□□□□□ -0.34
SRRM4-203ENST00000545224 B4DLN1 442 aa12.93□□□□□ -0.34
SRRM4-203ENST00000545224 SPATA31C2B4DYI2 1134 aa12.93□□□□□ -0.34
SRRM4-203ENST00000545224 ATP9AO75110 1047 aa12.93□□□□□ -0.34
SRRM4-203ENST00000545224 SGPL1O95470 568 aa12.93□□□□□ -0.34
SRRM4-203ENST00000545224 TDP2O95551 362 aa12.93□□□□□ -0.34
SRRM4-203ENST00000545224 ZSCAN22P10073 491 aaPredicted RBP12.93□□□□□ -0.34
SRRM4-203ENST00000545224 ARP10275 920 aa12.93□□□□□ -0.34
SRRM4-203ENST00000545224 PRKAR2AP13861 404 aaKnown RBP12.93□□□□□ -0.34
SRRM4-203ENST00000545224 SP2Q02086 613 aa12.93□□□□□ -0.34
SRRM4-203ENST00000545224 Q4G0T1 1027 aa12.93□□□□□ -0.34
SRRM4-203ENST00000545224 CEP55Q53EZ4 464 aa12.93□□□□□ -0.34
SRRM4-203ENST00000545224 PPP4R3AQ6IN85 833 aa12.93□□□□□ -0.34
SRRM4-203ENST00000545224 NEK8Q86SG6 692 aa12.93□□□□□ -0.34
SRRM4-203ENST00000545224 FERMT3Q86UX7 667 aa12.93□□□□□ -0.34
SRRM4-203ENST00000545224 C4orf32Q8N8J7 132 aa12.93□□□□□ -0.34
SRRM4-203ENST00000545224 U2AF1L4Q8WU68 220 aaKnown RBP12.93□□□□□ -0.34
SRRM4-203ENST00000545224 WDR11Q9BZH6 1224 aa12.93□□□□□ -0.34
SRRM4-203ENST00000545224 BCAS3Q9H6U6 928 aa12.93□□□□□ -0.34
SRRM4-203ENST00000545224 GNEQ9Y223 722 aaKnown RBP12.93□□□□□ -0.34
SRRM4-203ENST00000545224 ALPK3Q96L96 1907 aa12.92□□□□□ -0.34
SRRM4-203ENST00000545224 MAFGO15525 162 aa12.92□□□□□ -0.34
SRRM4-203ENST00000545224 DHX15O43143 795 aaKnown RBP12.92□□□□□ -0.34
SRRM4-203ENST00000545224 SLC37A4O43826 429 aa12.92□□□□□ -0.34
SRRM4-203ENST00000545224 EVI5O60447 810 aa12.92□□□□□ -0.34
SRRM4-203ENST00000545224 FARP2O94887 1054 aaPredicted RBP12.92□□□□□ -0.34
SRRM4-203ENST00000545224 F13A1P00488 732 aa12.92□□□□□ -0.34
SRRM4-203ENST00000545224 PTGS1P23219 599 aa12.92□□□□□ -0.34
SRRM4-203ENST00000545224 ADCYAP1R1P41586 468 aa12.92□□□□□ -0.34
SRRM4-203ENST00000545224 TRAPPC10P48553 1259 aa12.92□□□□□ -0.34
SRRM4-203ENST00000545224 CCDC144BQ3MJ40 725 aa12.92□□□□□ -0.34
SRRM4-203ENST00000545224 MYSM1Q5VVJ2 828 aa12.92□□□□□ -0.34
SRRM4-203ENST00000545224 LHX8Q68G74 356 aa12.92□□□□□ -0.34
SRRM4-203ENST00000545224 MCTP1Q6DN14 999 aa12.92□□□□□ -0.34
SRRM4-203ENST00000545224 IQSEC1Q6DN90 963 aa12.92□□□□□ -0.34
SRRM4-203ENST00000545224 FAM173BQ6P4H8 233 aa12.92□□□□□ -0.34
SRRM4-203ENST00000545224 BRAPQ7Z569 592 aa12.92□□□□□ -0.34
SRRM4-203ENST00000545224 GPRASP2Q96D09 838 aa12.92□□□□□ -0.34
SRRM4-203ENST00000545224 MPHOSPH6Q99547 160 aaKnown RBP12.92□□□□□ -0.34
SRRM4-203ENST00000545224 PAK6Q9NQU5 681 aaPredicted RBP12.92□□□□□ -0.34
SRRM4-203ENST00000545224 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.92□□□□□ -0.34
SRRM4-203ENST00000545224 KCNH7Q9NS40 1196 aa12.92□□□□□ -0.34
SRRM4-203ENST00000545224 DDX41Q9UJV9 622 aaKnown RBP12.92□□□□□ -0.34
SRRM4-203ENST00000545224 CUL9Q8IWT3 2517 aa12.92□□□□□ -0.34
SRRM4-203ENST00000545224 SEPT4O43236 478 aa12.91□□□□□ -0.34
SRRM4-203ENST00000545224 TGFB3P10600 412 aa12.91□□□□□ -0.34
SRRM4-203ENST00000545224 KCNA2P16389 499 aa12.91□□□□□ -0.34
SRRM4-203ENST00000545224 SMPD1P17405 629 aa12.91□□□□□ -0.34
SRRM4-203ENST00000545224 NKX3-2P78367 333 aa12.91□□□□□ -0.34
SRRM4-203ENST00000545224 NBR1Q14596 966 aa12.91□□□□□ -0.34
SRRM4-203ENST00000545224 LETM2Q2VYF4 491 aa12.91□□□□□ -0.34
SRRM4-203ENST00000545224 B3GNT9Q6UX72 402 aa12.91□□□□□ -0.34
SRRM4-203ENST00000545224 SEPT14Q6ZU15 432 aa12.91□□□□□ -0.34
SRRM4-203ENST00000545224 ETNPPLQ8TBG4 499 aa12.91□□□□□ -0.34
SRRM4-203ENST00000545224 HAS1Q92839 578 aa12.91□□□□□ -0.34
SRRM4-203ENST00000545224 SENP7Q9BQF6 1050 aa12.91□□□□□ -0.34
SRRM4-203ENST00000545224 ZSCAN16Q9H4T2 348 aaPredicted RBP12.91□□□□□ -0.34
SRRM4-203ENST00000545224 AGO4Q9HCK5 861 aaKnown RBP12.91□□□□□ -0.34
SRRM4-203ENST00000545224 KCNMB3Q9NPA1 279 aa12.91□□□□□ -0.34
SRRM4-203ENST00000545224 CNPY2Q9Y2B0 182 aa12.91□□□□□ -0.34
SRRM4-203ENST00000545224 PCDHB6Q9Y5E3 794 aa12.91□□□□□ -0.34
SRRM4-203ENST00000545224 CTAGE5O15320 804 aa12.9□□□□□ -0.34
SRRM4-203ENST00000545224 MSH4O15457 936 aa12.9□□□□□ -0.34
SRRM4-203ENST00000545224 FIBPO43427 364 aa12.9□□□□□ -0.34
SRRM4-203ENST00000545224 TFRCP02786 760 aaKnown RBP12.9□□□□□ -0.34
SRRM4-203ENST00000545224 GCFC2P16383 781 aaKnown RBP12.9□□□□□ -0.34
SRRM4-203ENST00000545224 MNX1P50219 401 aaPredicted RBP12.9□□□□□ -0.34
SRRM4-203ENST00000545224 ITGB3BPQ13352 177 aaPredicted RBP12.9□□□□□ -0.34
SRRM4-203ENST00000545224 LY6KQ17RY6 165 aa12.9□□□□□ -0.34
SRRM4-203ENST00000545224 DUSP28Q4G0W2 176 aa12.9□□□□□ -0.34
SRRM4-203ENST00000545224 PRR16Q569H4 304 aa12.9□□□□□ -0.34
SRRM4-203ENST00000545224 RILPL1Q5EBL4 403 aa12.9□□□□□ -0.34
SRRM4-203ENST00000545224 GJC2Q5T442 439 aaPredicted RBP12.9□□□□□ -0.34
SRRM4-203ENST00000545224 GPR153Q6NV75 609 aa12.9□□□□□ -0.34
SRRM4-203ENST00000545224 NLRX1Q86UT6 975 aa12.9□□□□□ -0.34
SRRM4-203ENST00000545224 PLA2G4DQ86XP0 818 aa12.9□□□□□ -0.34
SRRM4-203ENST00000545224 SCFD2Q8WU76 684 aa12.9□□□□□ -0.34
SRRM4-203ENST00000545224 COPS5Q92905 334 aa12.9□□□□□ -0.34
SRRM4-203ENST00000545224 MTMR9Q96QG7 549 aa12.9□□□□□ -0.34
SRRM4-203ENST00000545224 UNC93B1Q9H1C4 597 aa12.9□□□□□ -0.34
SRRM4-203ENST00000545224 TMEM60Q9H2L4 133 aa12.9□□□□□ -0.34
SRRM4-203ENST00000545224 ZHX1Q9UKY1 873 aaPredicted RBP12.9□□□□□ -0.34
SRRM4-203ENST00000545224 TELO2Q9Y4R8 837 aa12.9□□□□□ -0.34
SRRM4-203ENST00000545224 COL6A3P12111 3177 aa12.89□□□□□ -0.35
SRRM4-203ENST00000545224 CCNT1O60563 726 aaKnown RBP12.89□□□□□ -0.35
SRRM4-203ENST00000545224 AKR1A1P14550 325 aa12.89□□□□□ -0.35
SRRM4-203ENST00000545224 UBA1P22314 1058 aaKnown RBP12.89□□□□□ -0.35
SRRM4-203ENST00000545224 ARHGAP1Q07960 439 aa12.89□□□□□ -0.35
SRRM4-203ENST00000545224 ORC2Q13416 577 aaPredicted RBP12.89□□□□□ -0.35
SRRM4-203ENST00000545224 MTMR1Q13613 665 aa12.89□□□□□ -0.35
SRRM4-203ENST00000545224 TTLL4Q14679 1199 aa12.89□□□□□ -0.35
SRRM4-203ENST00000545224 ZNF174Q15697 407 aa12.89□□□□□ -0.35
SRRM4-203ENST00000545224 GNPTABQ3T906 1256 aa12.89□□□□□ -0.35
SRRM4-203ENST00000545224 TTC38Q5R3I4 469 aa12.89□□□□□ -0.35
SRRM4-203ENST00000545224 KCNV1Q6PIU1 500 aa12.89□□□□□ -0.35
SRRM4-203ENST00000545224 POTEDQ86YR6 584 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms