RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 RAB27AP51159 221 aa5.02□□□□□ -1.61
SCFD1-207ENST00000544052 JAM2P57087 298 aa5.02□□□□□ -1.61
SCFD1-207ENST00000544052 ATP13A4Q4VNC1 1196 aa5.02□□□□□ -1.61
SCFD1-207ENST00000544052 RALGPS1Q5JS13 557 aa5.02□□□□□ -1.61
SCFD1-207ENST00000544052 HLA-DQA1Q5Y7H0 255 aa5.02□□□□□ -1.61
SCFD1-207ENST00000544052 IQSEC1Q6DN90 963 aa5.02□□□□□ -1.61
SCFD1-207ENST00000544052 FSTL4Q6MZW2 842 aa5.02□□□□□ -1.61
SCFD1-207ENST00000544052 PUS7LQ9H0K6 701 aaKnown RBP5.02□□□□□ -1.61
SCFD1-207ENST00000544052 APOBEC2Q9Y235 224 aaKnown RBP5.02□□□□□ -1.61
SCFD1-207ENST00000544052 GSTA4O15217 222 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 NKRFO15226 690 aaKnown RBP eCLIP5.01□□□□□ -1.61
SCFD1-207ENST00000544052 USP2O75604 605 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-207ENST00000544052 KRT37O76014 449 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 ENDOUP21128 410 aaKnown RBP5.01□□□□□ -1.61
SCFD1-207ENST00000544052 SSTR4P31391 388 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 PRKCQQ04759 706 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 IKZF1Q13422 519 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 KIR3DS1Q14943 382 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 CRY1Q16526 586 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 CREB3L3Q68CJ9 461 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 LINC01599Q8WXQ3 324 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 TRMT2BQ96GJ1 504 aaKnown RBP5.01□□□□□ -1.61
SCFD1-207ENST00000544052 MAP6Q96JE9 813 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 ADAMTS10Q9H324 1103 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 SMURF1Q9HCE7 757 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 TCEAL9Q9UHQ7 104 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 SHTN1A0MZ66 631 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 C22orf46C9J442 243 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 FUCA1P04066 466 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 AMY2AP04746 511 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 AMY2BP19961 511 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 CD97P48960 835 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 NEK2P51955 445 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 KPNA1P52294 538 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-207ENST00000544052 GTF2A2P52657 109 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 NFE2Q16621 373 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-207ENST00000544052 MSMPQ1L6U9 139 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 PLEKHO2Q8TD55 490 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 GOLGA2P5Q9HBQ8 144 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 OXSMQ9NWU1 459 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 VAV3Q9UKW4 847 aa5.01□□□□□ -1.61
SCFD1-207ENST00000544052 TNKSO95271 1327 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 ZNF561-AS1K7EIQ3 104 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 ZGLP1P0C6A0 271 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 GNAT1P11488 350 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 EPHB1P54762 984 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 LACTBP83111 547 aaPredicted RBP5□□□□□ -1.61
SCFD1-207ENST00000544052 SYDE2Q5VT97 1194 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 ARHGAP36Q6ZRI8 547 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 HDGFL2Q7Z4V5 671 aaPredicted RBP5□□□□□ -1.61
SCFD1-207ENST00000544052 SPRED2Q7Z698 418 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 SLCO6A1Q86UG4 719 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 PRDM7Q9NQW5 492 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 TGM5O43548 720 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 AKAP10O43572 662 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 MSL3P1P0C860 447 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 ZBTB48P10074 688 aaPredicted RBP5□□□□□ -1.61
SCFD1-207ENST00000544052 CD8BP10966 210 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 SLC9A1P19634 815 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 TACR1P25103 407 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 LSSP48449 732 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 RTP1P59025 263 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 ABCB5Q2M3G0 1257 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 HSP90AB2PQ58FF8 381 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 CPZQ66K79 652 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 ZNF574Q6ZN55 896 aaPredicted RBP5□□□□□ -1.61
SCFD1-207ENST00000544052 CEP128Q6ZU80 1094 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 OTOP1Q7RTM1 612 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 PTRH1Q86Y79 214 aaKnown RBP5□□□□□ -1.61
SCFD1-207ENST00000544052 WDR75Q8IWA0 830 aaKnown RBP5□□□□□ -1.61
SCFD1-207ENST00000544052 CMIPQ8IY22 773 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 CLRN3Q8NCR9 226 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 SH3RF2Q8TEC5 729 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 MS4A5Q9H3V2 200 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 ZIM2Q9NZV7 527 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 SLAMF8Q9P0V8 285 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 TNFRSF10DQ9UBN6 386 aa5□□□□□ -1.61
SCFD1-207ENST00000544052 H7BY64 318 aa4.99□□□□□ -1.61
SCFD1-207ENST00000544052 DVL2O14641 736 aa4.99□□□□□ -1.61
SCFD1-207ENST00000544052 PAX4O43316 350 aa4.99□□□□□ -1.61
SCFD1-207ENST00000544052 COBLO75128 1261 aa4.99□□□□□ -1.61
SCFD1-207ENST00000544052 EFEMP2O95967 443 aa4.99□□□□□ -1.61
SCFD1-207ENST00000544052 ZP2Q05996 745 aa4.99□□□□□ -1.61
SCFD1-207ENST00000544052 KRTAP19-1Q8IUB9 90 aa4.99□□□□□ -1.61
SCFD1-207ENST00000544052 RBM12BQ8IXT5 1001 aaKnown RBP4.99□□□□□ -1.61
SCFD1-207ENST00000544052 Q8N1Y9 231 aa4.99□□□□□ -1.61
SCFD1-207ENST00000544052 PIP4K2CQ8TBX8 421 aa4.99□□□□□ -1.61
SCFD1-207ENST00000544052 USP33Q8TEY7 942 aa4.99□□□□□ -1.61
SCFD1-207ENST00000544052 BCL7CQ8WUZ0 217 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-207ENST00000544052 SYTL4Q96C24 671 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-207ENST00000544052 HOOK2Q96ED9 719 aa4.99□□□□□ -1.61
SCFD1-207ENST00000544052 MTA3Q9BTC8 594 aa4.99□□□□□ -1.61
SCFD1-207ENST00000544052 IMPACTQ9P2X3 320 aa4.99□□□□□ -1.61
SCFD1-207ENST00000544052 GABBR1Q9UBS5 961 aa4.99□□□□□ -1.61
SCFD1-207ENST00000544052 A0A1W2PQ45 241 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-207ENST00000544052 A0A1W2PQY0 241 aa4.98□□□□□ -1.61
SCFD1-207ENST00000544052 BTBD11A6QL63 1104 aa4.98□□□□□ -1.61
SCFD1-207ENST00000544052 SCGB1D2O95969 90 aa4.98□□□□□ -1.61
SCFD1-207ENST00000544052 IARSP41252 1262 aaKnown RBP4.98□□□□□ -1.61
SCFD1-207ENST00000544052 IRF9Q00978 393 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms