RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 RSRC2Q7L4I2 434 aaKnown RBP15.48■□□□□ 0.07
MSH2-206ENST00000543555 FBXO11Q86XK2 927 aa15.48■□□□□ 0.07
MSH2-206ENST00000543555 CSRNP1Q96S65 589 aa15.48■□□□□ 0.07
MSH2-206ENST00000543555 P2RX7Q99572 595 aaKnown RBP15.48■□□□□ 0.07
MSH2-206ENST00000543555 TAOK3Q9H2K8 898 aa15.48■□□□□ 0.07
MSH2-206ENST00000543555 ZNF446Q9NWS9 450 aa15.48■□□□□ 0.07
MSH2-206ENST00000543555 ABCB11O95342 1321 aa15.47■□□□□ 0.07
MSH2-206ENST00000543555 BMP3P12645 472 aa15.47■□□□□ 0.07
MSH2-206ENST00000543555 ZBED6P86452 979 aa15.47■□□□□ 0.07
MSH2-206ENST00000543555 ARHGAP4P98171 946 aa15.47■□□□□ 0.07
MSH2-206ENST00000543555 COASYQ13057 564 aa15.47■□□□□ 0.07
MSH2-206ENST00000543555 IKQ13123 557 aaPredicted RBP15.47■□□□□ 0.07
MSH2-206ENST00000543555 RRP1BQ14684 758 aaKnown RBP15.47■□□□□ 0.07
MSH2-206ENST00000543555 VWA3BQ502W6 1294 aa15.47■□□□□ 0.07
MSH2-206ENST00000543555 FOXR2Q6PJQ5 311 aa15.47■□□□□ 0.07
MSH2-206ENST00000543555 SLFN12Q8IYM2 578 aa15.47■□□□□ 0.07
MSH2-206ENST00000543555 PCMTD1Q96MG8 357 aaPredicted RBP15.47■□□□□ 0.07
MSH2-206ENST00000543555 UIMC1Q96RL1 719 aa15.47■□□□□ 0.07
MSH2-206ENST00000543555 CTAGE9A4FU28 777 aa15.47■□□□□ 0.07
MSH2-206ENST00000543555 RTKN2Q8IZC4 609 aa15.47■□□□□ 0.07
MSH2-206ENST00000543555 GLIS3Q8NEA6 775 aa15.47■□□□□ 0.07
MSH2-206ENST00000543555 BMP2KQ9NSY1 1161 aaPredicted RBP15.47■□□□□ 0.07
MSH2-206ENST00000543555 CDC23Q9UJX2 597 aa15.47■□□□□ 0.07
MSH2-206ENST00000543555 KIAA1024Q9UPX6 916 aa15.47■□□□□ 0.07
MSH2-206ENST00000543555 COL4A5P29400 1685 aa15.47■□□□□ 0.07
MSH2-206ENST00000543555 A0A1W2PQJ5 194 aa15.46■□□□□ 0.07
MSH2-206ENST00000543555 E9PMD0 336 aa15.46■□□□□ 0.07
MSH2-206ENST00000543555 TUBB2AQ13885 445 aa15.46■□□□□ 0.07
MSH2-206ENST00000543555 LRRC41Q15345 812 aa15.46■□□□□ 0.07
MSH2-206ENST00000543555 USH1GQ495M9 461 aa15.46■□□□□ 0.07
MSH2-206ENST00000543555 BTNL9Q6UXG8 535 aa15.46■□□□□ 0.07
MSH2-206ENST00000543555 TUBB2BQ9BVA1 445 aa15.46■□□□□ 0.07
MSH2-206ENST00000543555 PANK4Q9NVE7 773 aa15.46■□□□□ 0.07
MSH2-206ENST00000543555 ARGLU1Q9NWB6 273 aaPredicted RBP15.46■□□□□ 0.07
MSH2-206ENST00000543555 POTEB3A0JP26 581 aa15.46■□□□□ 0.07
MSH2-206ENST00000543555 POTECB2RU33 542 aa15.46■□□□□ 0.07
MSH2-206ENST00000543555 SSBP05455 408 aaKnown RBP eCLIP15.46■□□□□ 0.07
MSH2-206ENST00000543555 MMP14P50281 582 aa15.46■□□□□ 0.07
MSH2-206ENST00000543555 MAN2A1Q16706 1144 aa15.46■□□□□ 0.07
MSH2-206ENST00000543555 KIF4BQ2VIQ3 1234 aa15.46■□□□□ 0.07
MSH2-206ENST00000543555 POTEBQ6S5H4 581 aa15.46■□□□□ 0.07
MSH2-206ENST00000543555 LRRC55Q6ZSA7 311 aa15.46■□□□□ 0.07
MSH2-206ENST00000543555 MYOCDQ8IZQ8 938 aa15.46■□□□□ 0.07
MSH2-206ENST00000543555 IQCDQ96DY2 449 aa15.46■□□□□ 0.07
MSH2-206ENST00000543555 TSG101Q99816 390 aa15.46■□□□□ 0.07
MSH2-206ENST00000543555 NDST4Q9H3R1 872 aa15.46■□□□□ 0.07
MSH2-206ENST00000543555 ZNHIT6Q9NWK9 470 aaKnown RBP15.46■□□□□ 0.07
MSH2-206ENST00000543555 A0A1W2PRG0 241 aa15.46■□□□□ 0.06
MSH2-206ENST00000543555 PLA2G4BP0C869 781 aa15.46■□□□□ 0.06
MSH2-206ENST00000543555 FAM26FQ5R3K3 315 aa15.46■□□□□ 0.06
MSH2-206ENST00000543555 TEX35Q5T0J7 233 aa15.46■□□□□ 0.06
MSH2-206ENST00000543555 SMAP1Q8IYB5 467 aaPredicted RBP15.46■□□□□ 0.06
MSH2-206ENST00000543555 GPR161Q8N6U8 529 aaKnown RBP15.46■□□□□ 0.06
MSH2-206ENST00000543555 ETNPPLQ8TBG4 499 aa15.46■□□□□ 0.06
MSH2-206ENST00000543555 GOLGA1Q92805 767 aa15.46■□□□□ 0.06
MSH2-206ENST00000543555 PSMD14O00487 310 aa15.45■□□□□ 0.06
MSH2-206ENST00000543555 FOSP01100 380 aaPredicted RBP15.45■□□□□ 0.06
MSH2-206ENST00000543555 YBX3P16989 372 aaKnown RBP eCLIP15.45■□□□□ 0.061e-6■□□□□ 10.8
MSH2-206ENST00000543555 STAT3P40763 770 aa15.45■□□□□ 0.06
MSH2-206ENST00000543555 HERVK_113P62684 666 aa15.45■□□□□ 0.06
MSH2-206ENST00000543555 NAPGQ99747 312 aaPredicted RBP15.45■□□□□ 0.06
MSH2-206ENST00000543555 FAM53CQ9NYF3 392 aa15.45■□□□□ 0.06
MSH2-206ENST00000543555 HERC5Q9UII4 1024 aaKnown RBP15.45■□□□□ 0.06
MSH2-206ENST00000543555 SYNPO2Q9UMS6 1093 aa15.45■□□□□ 0.06
MSH2-206ENST00000543555 SPDYE3A6NKU9 549 aa15.45■□□□□ 0.06
MSH2-206ENST00000543555 TBX3O15119 743 aa15.45■□□□□ 0.06
MSH2-206ENST00000543555 SREBF1P36956 1147 aa15.45■□□□□ 0.06
MSH2-206ENST00000543555 Q4G0T1 1027 aa15.45■□□□□ 0.06
MSH2-206ENST00000543555 PRR16Q569H4 304 aa15.45■□□□□ 0.06
MSH2-206ENST00000543555 SRGAP1Q7Z6B7 1085 aa15.45■□□□□ 0.06
MSH2-206ENST00000543555 RABGGTAQ92696 567 aa15.45■□□□□ 0.06
MSH2-206ENST00000543555 HAUS4Q9H6D7 363 aa15.45■□□□□ 0.06
MSH2-206ENST00000543555 TMOD2Q9NZR1 351 aa15.45■□□□□ 0.06
MSH2-206ENST00000543555 SIK3Q9Y2K2 1263 aa15.45■□□□□ 0.06
MSH2-206ENST00000543555 GJA3Q9Y6H8 435 aa15.45■□□□□ 0.06
MSH2-206ENST00000543555 MED24O75448 989 aa15.44■□□□□ 0.06
MSH2-206ENST00000543555 CYLC1P35663 651 aaPredicted RBP15.44■□□□□ 0.06
MSH2-206ENST00000543555 KRT83P78385 493 aa15.44■□□□□ 0.06
MSH2-206ENST00000543555 SPIRE1Q08AE8 756 aa15.44■□□□□ 0.06
MSH2-206ENST00000543555 ZCWPW2Q504Y3 356 aa15.44■□□□□ 0.06
MSH2-206ENST00000543555 CCDC65Q8IXS2 484 aa15.44■□□□□ 0.06
MSH2-206ENST00000543555 EPC1Q9H2F5 836 aa15.44■□□□□ 0.06
MSH2-206ENST00000543555 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.44■□□□□ 0.062e-6■□□□□ 10.6
MSH2-206ENST00000543555 SPDYE2BA6NHP3 402 aa15.44■□□□□ 0.06
MSH2-206ENST00000543555 SPDYE6P0CI01 402 aa15.44■□□□□ 0.06
MSH2-206ENST00000543555 HAUS3Q68CZ6 603 aa15.44■□□□□ 0.06
MSH2-206ENST00000543555 GPBP1Q86WP2 473 aa15.44■□□□□ 0.06
MSH2-206ENST00000543555 CCDC170Q8IYT3 715 aa15.44■□□□□ 0.06
MSH2-206ENST00000543555 CEP112Q8N8E3 955 aa15.44■□□□□ 0.06
MSH2-206ENST00000543555 LENG9Q96B70 501 aa15.44■□□□□ 0.06
MSH2-206ENST00000543555 NHEJ1Q9H9Q4 299 aaPredicted RBP15.44■□□□□ 0.06
MSH2-206ENST00000543555 TRIM10Q9UDY6 481 aa15.44■□□□□ 0.06
MSH2-206ENST00000543555 TCP10L2B9ZVM9 353 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 OPLAHO14841 1288 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 TAL1P17542 331 aaPredicted RBP15.43■□□□□ 0.06
MSH2-206ENST00000543555 CYP11B2P19099 503 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 CDK17Q00537 523 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 RSBN1LQ6PCB5 846 aaPredicted RBP15.43■□□□□ 0.06
MSH2-206ENST00000543555 ZNF662Q6ZS27 426 aa15.43■□□□□ 0.06
MSH2-206ENST00000543555 PRR12Q9ULL5 1215 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms