RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 PRR23AA6NEV1 266 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 USP17L12C9JPN9 530 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 USP17L21D6R901 530 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 PRKAB2O43741 272 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 RRP9O43818 475 aaKnown RBP9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 NBNO60934 754 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 TCF3P15923 654 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 SELPP16109 830 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 CLUL1Q15846 466 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 EPC2Q52LR7 807 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 SLC9C2Q5TAH2 1124 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 KIAA1211Q6ZU35 1233 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 LRRC8DQ7L1W4 858 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 SMC5Q8IY18 1101 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 CCDC155Q8N6L0 562 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 EAF2Q96CJ1 260 aaPredicted RBP9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 CTAGE1Q96RT6 745 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 IRF2BPLQ9H1B7 796 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 ARMT1Q9H993 441 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 RALGAPA2Q2PPJ7 1873 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 MICAL3Q7RTP6 2002 aa9.12□□□□□ -0.95
NPIPB4-215ENST00000542133 VPS13AQ96RL7 3174 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 H3BNC9 293 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 RBAK-RBAKDNI3L0D1 243 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 EFCAB14O75071 495 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 ID4P47928 161 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 HTRA4P83105 476 aaPredicted RBP9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 ZXDAP98168 799 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 DLX2Q07687 328 aaPredicted RBP9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 RBL2Q08999 1139 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 SMAD4Q13485 552 aaKnown RBP9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 GPM6BQ13491 265 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 CTC1Q2NKJ3 1217 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 CACTIN-AS1Q8N1I8 211 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 OR6J1Q8NGC5 347 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 DHX38Q92620 1227 aaKnown RBP9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 MKL1Q969V6 931 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 SAMD11Q96NU1 681 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 FSD1Q9BTV5 496 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 GPHNQ9NQX3 736 aaPredicted RBP9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 ATP8A2Q9NTI2 1148 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 NYAP2Q9P242 653 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 FEM1BQ9UK73 627 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 LHX6Q9UPM6 363 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 INSL6Q9Y581 213 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 MYO7AQ13402 2215 aa9.11□□□□□ -0.95
NPIPB4-215ENST00000542133 ZBED9Q6R2W3 1325 aa9.1□□□□□ -0.95
NPIPB4-215ENST00000542133 ZNF292O60281 2723 aa9.1□□□□□ -0.95
NPIPB4-215ENST00000542133 H0Y858 1186 aa9.1□□□□□ -0.95
NPIPB4-215ENST00000542133 STXBP3O00186 592 aa9.1□□□□□ -0.95
NPIPB4-215ENST00000542133 TBX10O75333 385 aa9.1□□□□□ -0.95
NPIPB4-215ENST00000542133 PPFIA4O75335 1185 aa9.1□□□□□ -0.95
NPIPB4-215ENST00000542133 RGS20O76081 388 aa9.1□□□□□ -0.95
NPIPB4-215ENST00000542133 MBD4O95243 580 aa9.1□□□□□ -0.95
NPIPB4-215ENST00000542133 PARNO95453 639 aaKnown RBP9.1□□□□□ -0.95
NPIPB4-215ENST00000542133 SLFN5Q08AF3 891 aa9.1□□□□□ -0.95
NPIPB4-215ENST00000542133 PTGISQ16647 500 aa9.1□□□□□ -0.95
NPIPB4-215ENST00000542133 AMOTL1Q8IY63 956 aa9.1□□□□□ -0.95
NPIPB4-215ENST00000542133 SSH3Q8TE77 659 aa9.1□□□□□ -0.95
NPIPB4-215ENST00000542133 WDR11Q9BZH6 1224 aa9.1□□□□□ -0.95
NPIPB4-215ENST00000542133 JADE2Q9NQC1 790 aa9.1□□□□□ -0.95
NPIPB4-215ENST00000542133 TLR9Q9NR96 1032 aa9.1□□□□□ -0.95
NPIPB4-215ENST00000542133 CYP39A1Q9NYL5 469 aa9.1□□□□□ -0.95
NPIPB4-215ENST00000542133 RAD50Q92878 1312 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 RBM47A0AV96 593 aaKnown RBP9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 CCER2I3L3R5 266 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 GOLIM4O00461 696 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 NCK2O43639 380 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 SURF6O75683 361 aaKnown RBP9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 KRT37O76014 449 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 FDX1P10109 184 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 AVPR2P30518 371 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 SIGLEC14Q08ET2 396 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 HYAL1Q12794 435 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 IKBKEQ14164 716 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 TTF1Q15361 905 aaPredicted RBP9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 TKFCQ3LXA3 575 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 BRDTQ58F21 947 aaPredicted RBP9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 GDF6Q6KF10 455 aaPredicted RBP9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 TRAF7Q6Q0C0 670 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 SESTD1Q86VW0 696 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 FBXO11Q86XK2 927 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 KCNV2Q8TDN2 545 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 ASIC4Q96FT7 647 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 TRERF1Q96PN7 1200 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 PURBQ96QR8 312 aaKnown RBP9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 KDM4CQ9H3R0 1056 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 NUB1Q9Y5A7 615 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 RPS6KL1Q9Y6S9 549 aa9.09□□□□□ -0.95
NPIPB4-215ENST00000542133 IGKV6D-41A0A0C4DH26 115 aa9.08□□□□□ -0.96
NPIPB4-215ENST00000542133 MED19A0JLT2 244 aaPredicted RBP9.08□□□□□ -0.96
NPIPB4-215ENST00000542133 LOC730098B7Z3J9 87 aa9.08□□□□□ -0.96
NPIPB4-215ENST00000542133 KPNA6O60684 536 aa9.08□□□□□ -0.96
NPIPB4-215ENST00000542133 EIF3JO75822 258 aaKnown RBP9.08□□□□□ -0.96
NPIPB4-215ENST00000542133 ZRANB2O95218 330 aaKnown RBP eCLIP9.08□□□□□ -0.96
NPIPB4-215ENST00000542133 AMHP03971 560 aa9.08□□□□□ -0.96
NPIPB4-215ENST00000542133 CKBP12277 381 aa9.08□□□□□ -0.96
NPIPB4-215ENST00000542133 ALAS1P13196 640 aa9.08□□□□□ -0.96
NPIPB4-215ENST00000542133 RASA1P20936 1047 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms