RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 NCAPG2Q86XI2 1143 aa5.62□□□□□ -1.51
SNHG1-214ENST00000540865 MSL3Q8N5Y2 521 aaKnown RBP5.62□□□□□ -1.51
SNHG1-214ENST00000540865 ZNF837Q96EG3 531 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-214ENST00000540865 HSH2DQ96JZ2 352 aa5.62□□□□□ -1.51
SNHG1-214ENST00000540865 GLT1D1Q96MS3 346 aa5.62□□□□□ -1.51
SNHG1-214ENST00000540865 TINF2Q9BSI4 451 aa5.62□□□□□ -1.51
SNHG1-214ENST00000540865 EHD4Q9H223 541 aa5.62□□□□□ -1.51
SNHG1-214ENST00000540865 CABP5Q9NP86 173 aa5.62□□□□□ -1.51
SNHG1-214ENST00000540865 AATFQ9NY61 560 aaKnown RBP eCLIP5.62□□□□□ -1.511e-323■□□□□ 9
SNHG1-214ENST00000540865 ZDHHC3Q9NYG2 299 aa5.62□□□□□ -1.51
SNHG1-214ENST00000540865 KLK14Q9P0G3 267 aa5.62□□□□□ -1.51
SNHG1-214ENST00000540865 LRP2BPQ9P2M1 347 aa5.62□□□□□ -1.51
SNHG1-214ENST00000540865 LRFN2Q9ULH4 789 aa5.62□□□□□ -1.51
SNHG1-214ENST00000540865 PA2G4Q9UQ80 394 aaKnown RBP5.62□□□□□ -1.51
SNHG1-214ENST00000540865 HDAC5Q9UQL6 1122 aa5.62□□□□□ -1.51
SNHG1-214ENST00000540865 CNPY2Q9Y2B0 182 aa5.62□□□□□ -1.51
SNHG1-214ENST00000540865 A0A0U1RQG5 324 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-214ENST00000540865 ARVCFO00192 962 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 DUSP11O75319 330 aaKnown RBP5.61□□□□□ -1.51
SNHG1-214ENST00000540865 ITGB2P05107 769 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 UQCRFS1P1P0C7P4 283 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 TAL1P17542 331 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-214ENST00000540865 CST5P28325 142 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-214ENST00000540865 CYP2C18P33260 490 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 NHLH1Q02575 133 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 TFCP2Q12800 502 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 ABCB5Q2M3G0 1257 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 ZNF792Q3KQV3 632 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 CERKLQ49MI3 558 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-214ENST00000540865 COX20Q5RI15 118 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 GORABQ5T7V8 394 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 LYPD4Q6UWN0 246 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 PI16Q6UXB8 463 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 CERS3Q8IU89 383 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 FAM126BQ8IXS8 530 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 TRIM22Q8IYM9 498 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 PGBD3Q8N328 593 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 PCSK9Q8NBP7 692 aaKnown RBP5.61□□□□□ -1.51
SNHG1-214ENST00000540865 NEUROD6Q96NK8 337 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 MMP19Q99542 508 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 TANGO6Q9C0B7 1094 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 NUCKS1Q9H1E3 243 aaKnown RBP5.61□□□□□ -1.51
SNHG1-214ENST00000540865 SAP30BPQ9UHR5 308 aaKnown RBP5.61□□□□□ -1.51
SNHG1-214ENST00000540865 SERPINB13Q9UIV8 391 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 FAM184BQ9ULE4 1060 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 SYNRGQ9UMZ2 1314 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 SLC4A7Q9Y6M7 1214 aa5.61□□□□□ -1.51
SNHG1-214ENST00000540865 CACNA1FO60840 1977 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 CD4P01730 458 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 PGK2P07205 417 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 ASGR1P07306 291 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 ALADP13716 330 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 GUCY1A2P33402 732 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 COPB2P35606 906 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 MCAMP43121 646 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 RABGGTBP53611 331 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 MTMR3Q13615 1198 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 PLS1Q14651 629 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 KCTD2Q14681 263 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 FAM26DQ5JW98 314 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 SV2AQ7L0J3 742 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 OTOP2Q7RTS6 562 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 ADGRA1Q86SQ6 560 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 TTC6Q86TZ1 520 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 RPUSD2Q8IZ73 545 aaKnown RBP5.6□□□□□ -1.51
SNHG1-214ENST00000540865 SLC43A3Q8NBI5 491 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 C1orf216Q8TAB5 229 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 GTPBP3Q969Y2 492 aaKnown RBP5.6□□□□□ -1.51
SNHG1-214ENST00000540865 LENG1Q96BZ8 264 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-214ENST00000540865 SEZ6LQ9BYH1 1024 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 CRISPLD1Q9H336 500 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 HIPK3Q9H422 1215 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 SPC25Q9HBM1 224 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 CFAP54Q96N23 3096 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 MYH2Q9UKX2 1941 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 FRMPD3Q5JV73 1810 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 ZNF236Q9UL36 1845 aa5.6□□□□□ -1.51
SNHG1-214ENST00000540865 PRRC2BQ5JSZ5 2229 aaKnown RBP5.59□□□□□ -1.51
SNHG1-214ENST00000540865 A0A1W2PRG0 241 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 MYADML2A6NDP7 307 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 RFXAPO00287 272 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 FLOT1O75955 427 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 PROCP04070 461 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 PFKMP08237 780 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 C6orf222P0C671 652 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-214ENST00000540865 MYOGP15173 224 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 ATP2A2P16615 1042 aaKnown RBP5.59□□□□□ -1.51
SNHG1-214ENST00000540865 SHMT1P34896 483 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 USP5P45974 858 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 GJA9P57773 515 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 NKX3-2P78367 333 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 UBAP2LQ14157 1087 aaKnown RBP5.59□□□□□ -1.51
SNHG1-214ENST00000540865 TMEM132BQ14DG7 1078 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 SEPT2Q15019 361 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 RTN1Q16799 776 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 TMEM67Q5HYA8 995 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 MAMDC4Q6UXC1 1216 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 RIOX2Q8IUF8 465 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 GJD3Q8N144 294 aa5.59□□□□□ -1.51
SNHG1-214ENST00000540865 ATG4CQ96DT6 458 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms