RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 PNMA3Q9UL41 463 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 RABGAP1Q9Y3P9 1069 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 FRMPD4Q14CM0 1322 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 PASKQ96RG2 1323 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 SMCHD1A6NHR9 2005 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 LOC285556D6RIA3 1793 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 MRE11P49959 708 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 CNTN2Q02246 1040 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 SPIRE1Q08AE8 756 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 GRB10Q13322 594 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 STX1AQ16623 288 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 NAALADL2Q58DX5 795 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 WDR78Q5VTH9 848 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 KRT79Q5XKE5 535 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 NCAPH2Q6IBW4 605 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 KANK3Q6NY19 840 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 C11orf57Q6ZUT1 292 aaPredicted RBP7.77□□□□□ -1.17
CDH19-203ENST00000540086 SH3RF1Q7Z6J0 888 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 ANKRD23Q86SG2 305 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 ELOA2Q8IYF1 753 aaPredicted RBP7.77□□□□□ -1.17
CDH19-203ENST00000540086 PNMA5Q96PV4 448 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 MTRQ99707 1265 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 PTPN18Q99952 460 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 PYM1Q9BRP8 204 aaKnown RBP7.77□□□□□ -1.17
CDH19-203ENST00000540086 ZNF577Q9BSK1 485 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 WDR11Q9BZH6 1224 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 USP25Q9UHP3 1055 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 HOOK1Q9UJC3 728 aaKnown RBP7.77□□□□□ -1.17
CDH19-203ENST00000540086 TUBE1Q9UJT0 475 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 PCDHA5Q9Y5H7 936 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 UBIAD1Q9Y5Z9 338 aa7.77□□□□□ -1.17
CDH19-203ENST00000540086 RLFQ13129 1914 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 CHMP2AO43633 222 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 NR3C2P08235 984 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 XRCC6P12956 609 aaKnown RBP eCLIP7.76□□□□□ -1.17
CDH19-203ENST00000540086 CCT6AP40227 531 aaKnown RBP7.76□□□□□ -1.17
CDH19-203ENST00000540086 ERVK-9P63128 1117 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 ERVK-24P63145 666 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 SETQ01105 290 aaPredicted RBP7.76□□□□□ -1.17
CDH19-203ENST00000540086 ECM1Q16610 540 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 L1TD1Q5T7N2 865 aaKnown RBP7.76□□□□□ -1.17
CDH19-203ENST00000540086 LRCH2Q5VUJ6 765 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 RGMBQ6NW40 437 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 ANKRD13CQ8N6S4 541 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 SMC1BQ8NDV3 1235 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 NSUN6Q8TEA1 469 aaKnown RBP7.76□□□□□ -1.17
CDH19-203ENST00000540086 SLC5A5Q92911 643 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 SMARCE1Q969G3 411 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 CALML4Q96GE6 196 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 CCDC34Q96HJ3 373 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 CDK5RAP3Q96JB5 506 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 BLZF1Q9H2G9 400 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 JADE2Q9NQC1 790 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 KCNH7Q9NS40 1196 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 VAV3Q9UKW4 847 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 SLC45A1Q9Y2W3 748 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 PFASO15067 1338 aa7.76□□□□□ -1.17
CDH19-203ENST00000540086 TESPA1A2RU30 521 aaPredicted RBP7.75□□□□□ -1.17
CDH19-203ENST00000540086 POTEB2H3BUK9 544 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 IPO5O00410 1097 aaKnown RBP7.75□□□□□ -1.17
CDH19-203ENST00000540086 EML1O00423 815 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 GAS7O60861 476 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 PSMD10O75832 226 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 SLC25A27O95847 323 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 PGK2P07205 417 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 CCND2P30279 289 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 DPYDQ12882 1025 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 MTMR1Q13613 665 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 CUL4BQ13620 913 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 DHX8Q14562 1220 aaKnown RBP7.75□□□□□ -1.17
CDH19-203ENST00000540086 DPCR1Q3MIW9 517 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 KCNK18Q7Z418 384 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 GTF3C2Q8WUA4 911 aaPredicted RBP7.75□□□□□ -1.17
CDH19-203ENST00000540086 PORCNQ9H237 461 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 EFCC1Q9HA90 598 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 ANO10Q9NW15 660 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 MAN1B1Q9UKM7 699 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 ABT1Q9ULW3 272 aaKnown RBP7.75□□□□□ -1.17
CDH19-203ENST00000540086 ASTN1O14525 1302 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 PTPRFP10586 1907 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 POTEB3A0JP26 581 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 DDX39AO00148 427 aaKnown RBP7.75□□□□□ -1.17
CDH19-203ENST00000540086 IGF2BP3O00425 579 aaKnown RBP eCLIP7.75□□□□□ -1.17
CDH19-203ENST00000540086 GTPBP6O43824 516 aaPredicted RBP7.75□□□□□ -1.17
CDH19-203ENST00000540086 MED24O75448 989 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 SMC2O95347 1197 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 BCRP11274 1271 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 COPB2P35606 906 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 SARSP49591 514 aaKnown RBP7.75□□□□□ -1.17
CDH19-203ENST00000540086 NLRP12P59046 1061 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 FSTL1Q12841 308 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 ITGB3BPQ13352 177 aaPredicted RBP7.75□□□□□ -1.17
CDH19-203ENST00000540086 MCM6Q14566 821 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 TMEM119Q4V9L6 283 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 XRRA1Q6P2D8 792 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 POTEBQ6S5H4 581 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 OTOP1Q7RTM1 612 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 NIPA1Q7RTP0 329 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 LUZP1Q86V48 1076 aa7.75□□□□□ -1.17
CDH19-203ENST00000540086 VSIG10LQ86VR7 867 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms