RNA–Protein interactions for RNA: ENST00000539782.1

LDHB-208, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-208ENST00000539782 SUGCTQ9HAC7 445 aa8.37□□□□□ -1.07
LDHB-208ENST00000539782 MLXIPQ9HAP2 919 aa8.37□□□□□ -1.07
LDHB-208ENST00000539782 PXMP2Q9NR77 195 aa8.37□□□□□ -1.07
LDHB-208ENST00000539782 COL20A1Q9P218 1284 aa8.37□□□□□ -1.07
LDHB-208ENST00000539782 CTNNA3Q9UI47 895 aa8.37□□□□□ -1.07
LDHB-208ENST00000539782 ARIH1Q9Y4X5 557 aaPredicted RBP8.37□□□□□ -1.07
LDHB-208ENST00000539782 PRRC2BQ5JSZ5 2229 aaKnown RBP8.36□□□□□ -1.07
LDHB-208ENST00000539782 C17orf102A2RUQ5 167 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 RSPH10B2B2RC85 870 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 B4E1Z4 1266 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 NOP56O00567 594 aaKnown RBP8.36□□□□□ -1.07
LDHB-208ENST00000539782 GPR37L1O60883 481 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 GGPS1O95749 300 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 RSPH10BP0C881 870 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 TRAF1Q13077 416 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 GPNMBQ14956 572 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 IMMTQ16891 758 aaKnown RBP8.36□□□□□ -1.07
LDHB-208ENST00000539782 PUS10Q3MIT2 529 aaKnown RBP8.36□□□□□ -1.07
LDHB-208ENST00000539782 LEXMQ3ZCV2 418 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 IFIT1BQ5T764 474 aaKnown RBP8.36□□□□□ -1.07
LDHB-208ENST00000539782 PTCRAQ6ISU1 281 aaPredicted RBP8.36□□□□□ -1.07
LDHB-208ENST00000539782 GJD3Q8N144 294 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 SEPT8Q92599 483 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 ATP6V0A1Q93050 837 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 SAMD11Q96NU1 681 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 CTAGE1Q96RT6 745 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 YME1L1Q96TA2 773 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 C17orf80Q9BSJ5 609 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 KRT23Q9C075 422 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 LNPKQ9C0E8 428 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 CNNM2Q9H8M5 875 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 JMJD4Q9H9V9 463 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 FAM50BQ9Y247 325 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 MUC3AQ02505 3323 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 REV3LO60673 3130 aa8.36□□□□□ -1.07
LDHB-208ENST00000539782 HAS3O00219 553 aa8.35□□□□□ -1.07
LDHB-208ENST00000539782 HIP1O00291 1037 aa8.35□□□□□ -1.07
LDHB-208ENST00000539782 PPFIA4O75335 1185 aa8.35□□□□□ -1.07
LDHB-208ENST00000539782 UPP2O95045 317 aa8.35□□□□□ -1.07
LDHB-208ENST00000539782 CTSHP09668 335 aa8.35□□□□□ -1.07
LDHB-208ENST00000539782 ALADP13716 330 aa8.35□□□□□ -1.07
LDHB-208ENST00000539782 SDSP20132 328 aa8.35□□□□□ -1.07
LDHB-208ENST00000539782 CCND2P30279 289 aa8.35□□□□□ -1.07
LDHB-208ENST00000539782 RRP1P56182 461 aaKnown RBP8.35□□□□□ -1.07
LDHB-208ENST00000539782 ZNF200P98182 395 aaPredicted RBP8.35□□□□□ -1.07
LDHB-208ENST00000539782 TCTN1Q2MV58 587 aa8.35□□□□□ -1.07
LDHB-208ENST00000539782 TRIM71Q2Q1W2 868 aaKnown RBP8.35□□□□□ -1.07
LDHB-208ENST00000539782 CELF3Q5SZQ8 465 aaKnown RBP8.35□□□□□ -1.07
LDHB-208ENST00000539782 CWC27Q6UX04 472 aaKnown RBP8.35□□□□□ -1.07
LDHB-208ENST00000539782 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.35□□□□□ -1.075e-14■□□□□ 10.7
LDHB-208ENST00000539782 HOMER1Q86YM7 354 aa8.35□□□□□ -1.07
LDHB-208ENST00000539782 ENAHQ8N8S7 591 aaPredicted RBP8.35□□□□□ -1.07
LDHB-208ENST00000539782 DBF4BQ8NFT6 615 aa8.35□□□□□ -1.07
LDHB-208ENST00000539782 MRPL38Q96DV4 380 aaKnown RBP8.35□□□□□ -1.07
LDHB-208ENST00000539782 PDCD2LQ9BRP1 358 aa8.35□□□□□ -1.07
LDHB-208ENST00000539782 PCDHA1Q9Y5I3 950 aa8.35□□□□□ -1.07
LDHB-208ENST00000539782 NCOR1O75376 2440 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 XIRP2A4UGR9 3374 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 KLRF2D3W0D1 207 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 PI4K2BG5E9Z4 385 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 H3BRB1 525 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 GCOM1H8Y6P7 765 aaPredicted RBP8.34□□□□□ -1.07
LDHB-208ENST00000539782 ZBTB5O15062 677 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 POLR2MP0CAP2 368 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 GNAT1P11488 350 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 IL9P15248 144 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 UBA1P22314 1058 aaKnown RBP8.34□□□□□ -1.07
LDHB-208ENST00000539782 HOXA13P31271 388 aaPredicted RBP8.34□□□□□ -1.07
LDHB-208ENST00000539782 HSD17B4P51659 736 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 GPM6BQ13491 265 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 HDAC1Q13547 482 aaPredicted RBP8.34□□□□□ -1.07
LDHB-208ENST00000539782 MBTPS1Q14703 1052 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 PGM5Q15124 567 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 HSDL1Q3SXM5 330 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 GNPTABQ3T906 1256 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 MYSM1Q5VVJ2 828 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 B4GALNT3Q6L9W6 998 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 SERINC5Q86VE9 423 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 FCHSD1Q86WN1 690 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 FAM178BQ8IXR5 827 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 SAMD3Q8N6K7 520 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 ANKS1AQ92625 1134 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 KHSRPQ92945 711 aaKnown RBP eCLIP8.34□□□□□ -1.07
LDHB-208ENST00000539782 WNT8BQ93098 351 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 IFIH1Q9BYX4 1025 aaKnown RBP8.34□□□□□ -1.07
LDHB-208ENST00000539782 TUT1Q9H6E5 874 aaKnown RBP8.34□□□□□ -1.07
LDHB-208ENST00000539782 MAP3K20Q9NYL2 800 aaKnown RBP8.34□□□□□ -1.07
LDHB-208ENST00000539782 PTPRSQ13332 1948 aa8.34□□□□□ -1.07
LDHB-208ENST00000539782 SIP14410 1827 aa8.33□□□□□ -1.08
LDHB-208ENST00000539782 LAMA4Q16363 1823 aa8.33□□□□□ -1.08
LDHB-208ENST00000539782 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.33□□□□□ -1.08
LDHB-208ENST00000539782 ERICH2A1L162 156 aa8.33□□□□□ -1.08
LDHB-208ENST00000539782 PRR33A8MZF0 331 aa8.33□□□□□ -1.08
LDHB-208ENST00000539782 H3BQ06 376 aaPredicted RBP8.33□□□□□ -1.08
LDHB-208ENST00000539782 CAND2O75155 1236 aa8.33□□□□□ -1.08
LDHB-208ENST00000539782 LGALS2P05162 132 aa8.33□□□□□ -1.08
LDHB-208ENST00000539782 SMIM10L2AP0DMW4 78 aa8.33□□□□□ -1.08
LDHB-208ENST00000539782 SMIM10L2BP0DMW5 78 aa8.33□□□□□ -1.08
LDHB-208ENST00000539782 TGFB3P10600 412 aa8.33□□□□□ -1.08
LDHB-208ENST00000539782 HOXD8P13378 290 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms