RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 MISP3Q96FF7 219 aa4.32□□□□□ -1.72
SNHG1-210ENST00000539303 TTC1Q99614 292 aa4.32□□□□□ -1.72
SNHG1-210ENST00000539303 ORAI3Q9BRQ5 295 aa4.32□□□□□ -1.72
SNHG1-210ENST00000539303 SP110Q9HB58 689 aa4.32□□□□□ -1.72
SNHG1-210ENST00000539303 EMC7Q9NPA0 242 aa4.32□□□□□ -1.72
SNHG1-210ENST00000539303 PAK6Q9NQU5 681 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-210ENST00000539303 SLC5A4Q9NY91 659 aa4.32□□□□□ -1.72
SNHG1-210ENST00000539303 SIT1Q9Y3P8 196 aa4.32□□□□□ -1.72
SNHG1-210ENST00000539303 A0A1W2PQ45 241 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-210ENST00000539303 A0A1W2PQY0 241 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 LCHNA4D1U4 455 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 ALG1L2C9J202 215 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 H7BY64 318 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 MAN2B1O00754 1011 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 DVL2O14641 736 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 TGM5O43548 720 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 GAS7O60861 476 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 COBLO75128 1261 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 PRKD3O94806 890 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 LTFP02788 710 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 PRNPP04156 253 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 NTRK1P04629 796 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 GNAT1P11488 350 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 SPINK2P20155 84 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 ENDOUP21128 410 aaKnown RBP4.31□□□□□ -1.72
SNHG1-210ENST00000539303 GRIK1P39086 918 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 KIR2DL1P43626 348 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-210ENST00000539303 KIR2DL2P43627 348 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-210ENST00000539303 CD97P48960 835 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 ITKQ08881 620 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 DUSP4Q13115 394 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 SEC23AQ15436 765 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 HABP4Q5JVS0 413 aaKnown RBP4.31□□□□□ -1.72
SNHG1-210ENST00000539303 CPZQ66K79 652 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 OTOP3Q7RTS5 596 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 ANKLE2Q86XL3 938 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 SPATS2Q86XZ4 545 aaKnown RBP4.31□□□□□ -1.72
SNHG1-210ENST00000539303 DTX1Q86Y01 620 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 SIRT2Q8IXJ6 389 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 CNTD1Q8N815 330 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 C2orf69Q8N8R5 385 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 NUP43Q8NFH3 380 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 CD244Q9BZW8 370 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 CABP5Q9NP86 173 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 OXSMQ9NWU1 459 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 LMCD1Q9NZU5 365 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 TRHDEQ9UKU6 1024 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 TELO2Q9Y4R8 837 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 X6R8D5 127 aa4.31□□□□□ -1.72
SNHG1-210ENST00000539303 BRINP1O60477 761 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 ALDH1L1O75891 902 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 ZBTB48P10074 688 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-210ENST00000539303 PRKCAP17252 672 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 SDHBP21912 280 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 FUT4P22083 530 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 PMLP29590 882 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 GTF2A2P52657 109 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 LACTBP83111 547 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-210ENST00000539303 SART3Q15020 963 aaKnown RBP4.3□□□□□ -1.72
SNHG1-210ENST00000539303 LRRC41Q15345 812 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 GPR19Q15760 415 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 CRY1Q16526 586 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 ATP13A4Q4VNC1 1196 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 RNF219Q5W0B1 726 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-210ENST00000539303 ARHGAP36Q6ZRI8 547 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 OTOP1Q7RTM1 612 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 HDGFL2Q7Z4V5 671 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-210ENST00000539303 NOSTRINQ8IVI9 506 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 CMIPQ8IY22 773 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 STK11IPQ8N1F8 1099 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 LZTR1Q8N653 840 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 ANKS4BQ8N8V4 417 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 CLRN3Q8NCR9 226 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 USP33Q8TEY7 942 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.3□□□□□ -1.72
SNHG1-210ENST00000539303 METTL14Q9HCE5 456 aaKnown RBP4.3□□□□□ -1.72
SNHG1-210ENST00000539303 CHPF2Q9P2E5 772 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 APOBEC2Q9Y235 224 aaKnown RBP4.3□□□□□ -1.72
SNHG1-210ENST00000539303 ZKSCAN5Q9Y2L8 839 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 TAF6LQ9Y6J9 622 aa4.3□□□□□ -1.72
SNHG1-210ENST00000539303 SCDO00767 359 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 GABRDO14764 452 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 SLC27A2O14975 620 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 NRDCO43847 1150 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 RNASE1P07998 156 aaKnown RBP4.29□□□□□ -1.72
SNHG1-210ENST00000539303 CPEP16870 476 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 SLC9A1P19634 815 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 LSSP48449 732 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 KPNA1P52294 538 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-210ENST00000539303 IRF9Q00978 393 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 TTF1Q15361 905 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-210ENST00000539303 SLC14A2Q15849 920 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 INTS5Q6P9B9 1019 aaKnown RBP4.29□□□□□ -1.72
SNHG1-210ENST00000539303 NECAB2Q7Z6G3 386 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 VSIG10LQ86VR7 867 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 KIF18BQ86Y91 864 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 FMNL3Q8IVF7 1028 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 NLGN2Q8NFZ4 835 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 TSR2Q969E8 191 aaKnown RBP4.29□□□□□ -1.72
SNHG1-210ENST00000539303 SYTL4Q96C24 671 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms