RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 SGSM2O43147 1006 aa22.8■■□□□ 1.24
TNFRSF1B-204ENST00000536782 PPFIA4O75335 1185 aa22.8■■□□□ 1.24
TNFRSF1B-204ENST00000536782 PARNO95453 639 aaKnown RBP22.8■■□□□ 1.24
TNFRSF1B-204ENST00000536782 CCND2P30279 289 aa22.8■■□□□ 1.24
TNFRSF1B-204ENST00000536782 RBL2Q08999 1139 aa22.8■■□□□ 1.24
TNFRSF1B-204ENST00000536782 TROAPQ12815 778 aa22.8■■□□□ 1.24
TNFRSF1B-204ENST00000536782 CELF3Q5SZQ8 465 aaKnown RBP22.8■■□□□ 1.24
TNFRSF1B-204ENST00000536782 FCHSD1Q86WN1 690 aa22.8■■□□□ 1.24
TNFRSF1B-204ENST00000536782 HERC6Q8IVU3 1022 aa22.8■■□□□ 1.24
TNFRSF1B-204ENST00000536782 DHX38Q92620 1227 aaKnown RBP22.8■■□□□ 1.24
TNFRSF1B-204ENST00000536782 SPATA33Q96N06 139 aa22.8■■□□□ 1.24
TNFRSF1B-204ENST00000536782 TAF6LQ9Y6J9 622 aa22.8■■□□□ 1.24
TNFRSF1B-204ENST00000536782 CYTH3O43739 400 aa22.79■■□□□ 1.24
TNFRSF1B-204ENST00000536782 TGFB3P10600 412 aa22.79■■□□□ 1.24
TNFRSF1B-204ENST00000536782 HOXD8P13378 290 aaPredicted RBP22.79■■□□□ 1.24
TNFRSF1B-204ENST00000536782 KCNJ6P48051 423 aa22.79■■□□□ 1.24
TNFRSF1B-204ENST00000536782 CATIPQ7Z7H3 387 aa22.79■■□□□ 1.24
TNFRSF1B-204ENST00000536782 IL31RAQ8NI17 732 aa22.79■■□□□ 1.24
TNFRSF1B-204ENST00000536782 ASB2Q96Q27 587 aa22.79■■□□□ 1.24
TNFRSF1B-204ENST00000536782 TSPYL2Q9H2G4 693 aaPredicted RBP22.79■■□□□ 1.24
TNFRSF1B-204ENST00000536782 SORBS3O60504 671 aa22.78■■□□□ 1.24
TNFRSF1B-204ENST00000536782 GGPS1O95749 300 aa22.78■■□□□ 1.24
TNFRSF1B-204ENST00000536782 CKBP12277 381 aa22.78■■□□□ 1.24
TNFRSF1B-204ENST00000536782 MRPS5P82675 430 aaKnown RBP22.78■■□□□ 1.24
TNFRSF1B-204ENST00000536782 PTK7Q13308 1070 aa22.78■■□□□ 1.24
TNFRSF1B-204ENST00000536782 GPNMBQ14956 572 aa22.78■■□□□ 1.24
TNFRSF1B-204ENST00000536782 HSDL1Q3SXM5 330 aa22.78■■□□□ 1.24
TNFRSF1B-204ENST00000536782 MICALL1Q8N3F8 863 aa22.78■■□□□ 1.24
TNFRSF1B-204ENST00000536782 CERS4Q9HA82 394 aa22.78■■□□□ 1.24
TNFRSF1B-204ENST00000536782 UBA1P22314 1058 aaKnown RBP22.77■■□□□ 1.24
TNFRSF1B-204ENST00000536782 SP2Q02086 613 aa22.77■■□□□ 1.24
TNFRSF1B-204ENST00000536782 CNKSR3Q6P9H4 555 aa22.77■■□□□ 1.24
TNFRSF1B-204ENST00000536782 MAP4K1Q92918 833 aa22.77■■□□□ 1.24
TNFRSF1B-204ENST00000536782 ZFP91Q96JP5 570 aaPredicted RBP22.77■■□□□ 1.24
TNFRSF1B-204ENST00000536782 MLXIPQ9HAP2 919 aa22.77■■□□□ 1.24
TNFRSF1B-204ENST00000536782 GTPBP6O43824 516 aaPredicted RBP22.76■■□□□ 1.23
TNFRSF1B-204ENST00000536782 TLL1O43897 1013 aa22.76■■□□□ 1.23
TNFRSF1B-204ENST00000536782 CXCL10P02778 98 aa22.76■■□□□ 1.23
TNFRSF1B-204ENST00000536782 ANTXR2P58335 489 aa22.76■■□□□ 1.23
TNFRSF1B-204ENST00000536782 WDR5P61964 334 aaKnown RBP22.76■■□□□ 1.23
TNFRSF1B-204ENST00000536782 IRX6P78412 446 aaPredicted RBP22.76■■□□□ 1.23
TNFRSF1B-204ENST00000536782 TAP1Q03518 808 aa22.76■■□□□ 1.23
TNFRSF1B-204ENST00000536782 IGDCC4Q8TDY8 1250 aa22.76■■□□□ 1.23
TNFRSF1B-204ENST00000536782 RFXAPO00287 272 aa22.75■■□□□ 1.23
TNFRSF1B-204ENST00000536782 NBNO60934 754 aa22.75■■□□□ 1.23
TNFRSF1B-204ENST00000536782 POU3F3P20264 500 aaPredicted RBP22.75■■□□□ 1.23
TNFRSF1B-204ENST00000536782 GNPTABQ3T906 1256 aa22.75■■□□□ 1.23
TNFRSF1B-204ENST00000536782 MB21D2Q8IYB1 491 aaPredicted RBP22.75■■□□□ 1.23
TNFRSF1B-204ENST00000536782 PIBF1Q8WXW3 757 aa22.75■■□□□ 1.23
TNFRSF1B-204ENST00000536782 GPKOWQ92917 476 aaPredicted RBP eCLIP22.75■■□□□ 1.23
TNFRSF1B-204ENST00000536782 RBAK-RBAKDNI3L0D1 243 aa22.74■■□□□ 1.23
TNFRSF1B-204ENST00000536782 TNFRSF10AO00220 468 aa22.74■■□□□ 1.23
TNFRSF1B-204ENST00000536782 STAM2O75886 525 aa22.74■■□□□ 1.23
TNFRSF1B-204ENST00000536782 ARHGEF15O94989 841 aa22.74■■□□□ 1.23
TNFRSF1B-204ENST00000536782 ZNF200P98182 395 aaPredicted RBP22.74■■□□□ 1.23
TNFRSF1B-204ENST00000536782 TRIM71Q2Q1W2 868 aaKnown RBP22.74■■□□□ 1.23
TNFRSF1B-204ENST00000536782 IL27Q8NEV9 243 aa22.74■■□□□ 1.23
TNFRSF1B-204ENST00000536782 CTCFLQ8NI51 663 aaPredicted RBP22.74■■□□□ 1.23
TNFRSF1B-204ENST00000536782 ARNTL2Q8WYA1 636 aa22.74■■□□□ 1.23
TNFRSF1B-204ENST00000536782 MAP3K14Q99558 947 aa22.74■■□□□ 1.23
TNFRSF1B-204ENST00000536782 C16orf70Q9BSU1 422 aa22.74■■□□□ 1.23
TNFRSF1B-204ENST00000536782 ZBED2Q9BTP6 218 aa22.74■■□□□ 1.23
TNFRSF1B-204ENST00000536782 RBM8AQ9Y5S9 174 aaKnown RBP22.74■■□□□ 1.23
TNFRSF1B-204ENST00000536782 MTCH2Q9Y6C9 303 aa22.74■■□□□ 1.23
TNFRSF1B-204ENST00000536782 ABHD14A-ACY1A0A1B0GW23 586 aa22.73■■□□□ 1.23
TNFRSF1B-204ENST00000536782 EPOPA6NHQ4 379 aa22.73■■□□□ 1.23
TNFRSF1B-204ENST00000536782 DDAH1O94760 285 aa22.73■■□□□ 1.23
TNFRSF1B-204ENST00000536782 KIF5BP33176 963 aa22.73■■□□□ 1.23
TNFRSF1B-204ENST00000536782 ZNF618Q5T7W0 954 aa22.73■■□□□ 1.23
TNFRSF1B-204ENST00000536782 WNT8BQ93098 351 aa22.73■■□□□ 1.23
TNFRSF1B-204ENST00000536782 RRP36Q96EU6 259 aaKnown RBP22.73■■□□□ 1.23
TNFRSF1B-204ENST00000536782 FRMPD4Q14CM0 1322 aa22.73■■□□□ 1.23
TNFRSF1B-204ENST00000536782 NOP56O00567 594 aaKnown RBP22.72■■□□□ 1.23
TNFRSF1B-204ENST00000536782 EFCAB14O75071 495 aa22.72■■□□□ 1.23
TNFRSF1B-204ENST00000536782 ICAM3P32942 547 aa22.72■■□□□ 1.23
TNFRSF1B-204ENST00000536782 DEFB103AP81534 67 aa22.72■■□□□ 1.23
TNFRSF1B-204ENST00000536782 MRPS9P82933 396 aaKnown RBP22.72■■□□□ 1.23
TNFRSF1B-204ENST00000536782 IKBKEQ14164 716 aa22.72■■□□□ 1.23
TNFRSF1B-204ENST00000536782 HIC1Q14526 733 aa22.72■■□□□ 1.23
TNFRSF1B-204ENST00000536782 SKIV2LQ15477 1246 aaKnown RBP22.72■■□□□ 1.23
TNFRSF1B-204ENST00000536782 TRAF7Q6Q0C0 670 aa22.72■■□□□ 1.23
TNFRSF1B-204ENST00000536782 CASC1Q6TDU7 716 aa22.72■■□□□ 1.23
TNFRSF1B-204ENST00000536782 ZNF654Q8IZM8 581 aa22.72■■□□□ 1.23
TNFRSF1B-204ENST00000536782 ADAMTS19Q8TE59 1207 aa22.72■■□□□ 1.23
TNFRSF1B-204ENST00000536782 INPP4AQ96PE3 977 aaPredicted RBP22.72■■□□□ 1.23
TNFRSF1B-204ENST00000536782 MTA3Q9BTC8 594 aa22.72■■□□□ 1.23
TNFRSF1B-204ENST00000536782 SPZ1Q9BXG8 430 aa22.72■■□□□ 1.23
TNFRSF1B-204ENST00000536782 LY9Q9HBG7 655 aa22.72■■□□□ 1.23
TNFRSF1B-204ENST00000536782 COL4A4P53420 1690 aaPredicted RBP22.71■■□□□ 1.23
TNFRSF1B-204ENST00000536782 C17orf102A2RUQ5 167 aa22.71■■□□□ 1.23
TNFRSF1B-204ENST00000536782 H3BRB1 525 aa22.71■■□□□ 1.23
TNFRSF1B-204ENST00000536782 SMARCA1P28370 1054 aa22.71■■□□□ 1.23
TNFRSF1B-204ENST00000536782 NEDD9Q14511 834 aa22.71■■□□□ 1.23
TNFRSF1B-204ENST00000536782 TCTN1Q2MV58 587 aa22.71■■□□□ 1.23
TNFRSF1B-204ENST00000536782 TMCO2Q7Z6W1 182 aaPredicted RBP22.71■■□□□ 1.23
TNFRSF1B-204ENST00000536782 SERINC5Q86VE9 423 aa22.71■■□□□ 1.23
TNFRSF1B-204ENST00000536782 SMARCC2Q8TAQ2 1214 aa22.71■■□□□ 1.23
TNFRSF1B-204ENST00000536782 CUL5Q93034 780 aa22.71■■□□□ 1.23
TNFRSF1B-204ENST00000536782 MYL10Q9BUA6 226 aa22.71■■□□□ 1.23
TNFRSF1B-204ENST00000536782 TUT1Q9H6E5 874 aaKnown RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms