RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 HSDL1Q3SXM5 330 aa16.47■□□□□ 0.23
RTN3P1-201ENST00000536295 TMTC3Q6ZXV5 915 aa16.47■□□□□ 0.23
RTN3P1-201ENST00000536295 C7orf31Q8N865 590 aa16.47■□□□□ 0.23
RTN3P1-201ENST00000536295 VWCEQ96DN2 955 aa16.47■□□□□ 0.23
RTN3P1-201ENST00000536295 KATNAL1Q9BW62 490 aa16.47■□□□□ 0.23
RTN3P1-201ENST00000536295 HDAC6Q9UBN7 1215 aa16.47■□□□□ 0.23
RTN3P1-201ENST00000536295 FRMPD4Q14CM0 1322 aa16.46■□□□□ 0.23
RTN3P1-201ENST00000536295 MEIS2O14770 477 aa16.46■□□□□ 0.23
RTN3P1-201ENST00000536295 TGFB3P10600 412 aa16.46■□□□□ 0.23
RTN3P1-201ENST00000536295 FOSL2P15408 326 aa16.46■□□□□ 0.23
RTN3P1-201ENST00000536295 GRIN2CQ14957 1233 aa16.46■□□□□ 0.23
RTN3P1-201ENST00000536295 KIAA0753Q2KHM9 967 aa16.46■□□□□ 0.23
RTN3P1-201ENST00000536295 GNPTABQ3T906 1256 aa16.46■□□□□ 0.23
RTN3P1-201ENST00000536295 DHX32Q7L7V1 743 aaKnown RBP16.46■□□□□ 0.23
RTN3P1-201ENST00000536295 SESTD1Q86VW0 696 aa16.46■□□□□ 0.23
RTN3P1-201ENST00000536295 SGMS1Q86VZ5 419 aa16.46■□□□□ 0.23
RTN3P1-201ENST00000536295 ZNF576Q9H609 170 aa16.46■□□□□ 0.23
RTN3P1-201ENST00000536295 BCAS3Q9H6U6 928 aa16.46■□□□□ 0.23
RTN3P1-201ENST00000536295 SLC4A7Q9Y6M7 1214 aa16.46■□□□□ 0.23
RTN3P1-201ENST00000536295 PITPNM1O00562 1244 aa16.45■□□□□ 0.22
RTN3P1-201ENST00000536295 F2P00734 622 aa16.45■□□□□ 0.22
RTN3P1-201ENST00000536295 IQCF3P0C7M6 154 aa16.45■□□□□ 0.22
RTN3P1-201ENST00000536295 EXOSC10Q01780 885 aaKnown RBP16.45■□□□□ 0.22
RTN3P1-201ENST00000536295 APOA5Q6Q788 366 aa16.45■□□□□ 0.22
RTN3P1-201ENST00000536295 HEATR3Q7Z4Q2 680 aa16.45■□□□□ 0.22
RTN3P1-201ENST00000536295 CCDC155Q8N6L0 562 aa16.45■□□□□ 0.22
RTN3P1-201ENST00000536295 INPP4AQ96PE3 977 aaPredicted RBP16.45■□□□□ 0.22
RTN3P1-201ENST00000536295 CTAGE1Q96RT6 745 aa16.45■□□□□ 0.22
RTN3P1-201ENST00000536295 FTOQ9C0B1 505 aaKnown RBP eCLIP16.45■□□□□ 0.22
RTN3P1-201ENST00000536295 PSTPIP2Q9H939 334 aa16.45■□□□□ 0.22
RTN3P1-201ENST00000536295 GTF2IRD1Q9UHL9 959 aa16.45■□□□□ 0.22
RTN3P1-201ENST00000536295 MSRAQ9UJ68 235 aa16.45■□□□□ 0.22
RTN3P1-201ENST00000536295 BRPF3Q9ULD4 1205 aa16.45■□□□□ 0.22
RTN3P1-201ENST00000536295 MYH7BA7E2Y1 1941 aa16.45■□□□□ 0.22
RTN3P1-201ENST00000536295 HAS3O00219 553 aa16.44■□□□□ 0.22
RTN3P1-201ENST00000536295 PIK3CDO00329 1044 aa16.44■□□□□ 0.22
RTN3P1-201ENST00000536295 NOP56O00567 594 aaKnown RBP16.44■□□□□ 0.22
RTN3P1-201ENST00000536295 PPFIA4O75335 1185 aa16.44■□□□□ 0.22
RTN3P1-201ENST00000536295 STAM2O75886 525 aa16.44■□□□□ 0.22
RTN3P1-201ENST00000536295 PFKMP08237 780 aa16.44■□□□□ 0.22
RTN3P1-201ENST00000536295 RFC2P35250 354 aa16.44■□□□□ 0.22
RTN3P1-201ENST00000536295 RABGGTBP53611 331 aa16.44■□□□□ 0.22
RTN3P1-201ENST00000536295 SEMA3FQ13275 785 aa16.44■□□□□ 0.22
RTN3P1-201ENST00000536295 KRT32Q14532 448 aa16.44■□□□□ 0.22
RTN3P1-201ENST00000536295 RAB30Q15771 203 aa16.44■□□□□ 0.22
RTN3P1-201ENST00000536295 UBE2SQ16763 222 aa16.44■□□□□ 0.22
RTN3P1-201ENST00000536295 PCNX4Q63HM2 1172 aa16.44■□□□□ 0.22
RTN3P1-201ENST00000536295 CYFIP1Q7L576 1253 aa16.44■□□□□ 0.22
RTN3P1-201ENST00000536295 MAFAQ8NHW3 353 aaPredicted RBP16.44■□□□□ 0.22
RTN3P1-201ENST00000536295 DHX38Q92620 1227 aaKnown RBP16.44■□□□□ 0.22
RTN3P1-201ENST00000536295 NKX2-4Q9H2Z4 354 aa16.44■□□□□ 0.22
RTN3P1-201ENST00000536295 NAP1L2Q9ULW6 460 aaPredicted RBP16.44■□□□□ 0.22
RTN3P1-201ENST00000536295 SCN5AQ14524 2016 aa16.44■□□□□ 0.22
RTN3P1-201ENST00000536295 KLF18A0A0U1RQI7 1052 aa16.43■□□□□ 0.22
RTN3P1-201ENST00000536295 SPATA31C2B4DYI2 1134 aa16.43■□□□□ 0.22
RTN3P1-201ENST00000536295 ZBTB43O43298 467 aa16.43■□□□□ 0.22
RTN3P1-201ENST00000536295 FIBPO43427 364 aa16.43■□□□□ 0.22
RTN3P1-201ENST00000536295 ACTN1P12814 892 aa16.43■□□□□ 0.22
RTN3P1-201ENST00000536295 HOXD8P13378 290 aaPredicted RBP16.43■□□□□ 0.22
RTN3P1-201ENST00000536295 CPA1P15085 419 aa16.43■□□□□ 0.22
RTN3P1-201ENST00000536295 ICAM3P32942 547 aa16.43■□□□□ 0.22
RTN3P1-201ENST00000536295 FGD1P98174 961 aa16.43■□□□□ 0.22
RTN3P1-201ENST00000536295 ZNF200P98182 395 aaPredicted RBP16.43■□□□□ 0.22
RTN3P1-201ENST00000536295 SP4Q02446 784 aa16.43■□□□□ 0.22
RTN3P1-201ENST00000536295 RTN1Q16799 776 aa16.43■□□□□ 0.22
RTN3P1-201ENST00000536295 TSGA10IPQ3SY00 556 aa16.43■□□□□ 0.22
RTN3P1-201ENST00000536295 CAGE1Q8TC20 777 aa16.43■□□□□ 0.22
RTN3P1-201ENST00000536295 C16orf70Q9BSU1 422 aa16.43■□□□□ 0.22
RTN3P1-201ENST00000536295 RBM28Q9NW13 759 aaKnown RBP16.43■□□□□ 0.22
RTN3P1-201ENST00000536295 YBX2Q9Y2T7 364 aaKnown RBP16.43■□□□□ 0.22
RTN3P1-201ENST00000536295 CNTNAP5Q8WYK1 1306 aa16.43■□□□□ 0.22
RTN3P1-201ENST00000536295 GOLGA8AA7E2F4 631 aa16.42■□□□□ 0.22
RTN3P1-201ENST00000536295 GOLGA8BA8MQT2 603 aa16.42■□□□□ 0.22
RTN3P1-201ENST00000536295 LGALS2P05162 132 aa16.42■□□□□ 0.22
RTN3P1-201ENST00000536295 MYOGP15173 224 aa16.42■□□□□ 0.22
RTN3P1-201ENST00000536295 ATP2A2P16615 1042 aaKnown RBP16.42■□□□□ 0.22
RTN3P1-201ENST00000536295 NEDD9Q14511 834 aa16.42■□□□□ 0.22
RTN3P1-201ENST00000536295 LRRC8DQ7L1W4 858 aa16.42■□□□□ 0.22
RTN3P1-201ENST00000536295 NLRX1Q86UT6 975 aa16.42■□□□□ 0.22
RTN3P1-201ENST00000536295 AFAP1L1Q8TED9 768 aa16.42■□□□□ 0.22
RTN3P1-201ENST00000536295 TANC1Q9C0D5 1861 aa16.42■□□□□ 0.22
RTN3P1-201ENST00000536295 SPDYE3A6NKU9 549 aa16.41■□□□□ 0.22
RTN3P1-201ENST00000536295 H3BRB1 525 aa16.41■□□□□ 0.22
RTN3P1-201ENST00000536295 RBAK-RBAKDNI3L0D1 243 aa16.41■□□□□ 0.22
RTN3P1-201ENST00000536295 HMGB1P09429 215 aaKnown RBP16.41■□□□□ 0.22
RTN3P1-201ENST00000536295 CKBP12277 381 aa16.41■□□□□ 0.22
RTN3P1-201ENST00000536295 SELPP16109 830 aa16.41■□□□□ 0.22
RTN3P1-201ENST00000536295 NAPAP54920 295 aa16.41■□□□□ 0.22
RTN3P1-201ENST00000536295 HIC1Q14526 733 aa16.41■□□□□ 0.22
RTN3P1-201ENST00000536295 WWC2Q6AWC2 1192 aa16.41■□□□□ 0.22
RTN3P1-201ENST00000536295 XRRA1Q6P2D8 792 aa16.41■□□□□ 0.22
RTN3P1-201ENST00000536295 METTL7BQ6UX53 244 aa16.41■□□□□ 0.22
RTN3P1-201ENST00000536295 JAKMIP1Q96N16 626 aaKnown RBP16.41■□□□□ 0.22
RTN3P1-201ENST00000536295 PRDM12Q9H4Q4 367 aa16.41■□□□□ 0.22
RTN3P1-201ENST00000536295 TUT1Q9H6E5 874 aaKnown RBP16.41■□□□□ 0.22
RTN3P1-201ENST00000536295 SLC28A3Q9HAS3 691 aa16.41■□□□□ 0.22
RTN3P1-201ENST00000536295 TELO2Q9Y4R8 837 aa16.41■□□□□ 0.22
RTN3P1-201ENST00000536295 CDH23Q9H251 3354 aa16.4■□□□□ 0.22
RTN3P1-201ENST00000536295 NEFLP07196 543 aa16.4■□□□□ 0.22
RTN3P1-201ENST00000536295 PTK7Q13308 1070 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms