RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 TRANK1O15050 2925 aa15.06■□□□□ 0
TNFRSF1A-207ENST00000535958 NOP56O00567 594 aaKnown RBP15.06■□□□□ 0
TNFRSF1A-207ENST00000535958 ZBTB5O15062 677 aa15.06■□□□□ 0
TNFRSF1A-207ENST00000535958 NBNO60934 754 aa15.06■□□□□ 0
TNFRSF1A-207ENST00000535958 LGR5O75473 907 aa15.06■□□□□ 0
TNFRSF1A-207ENST00000535958 GGPS1O95749 300 aa15.06■□□□□ 0
TNFRSF1A-207ENST00000535958 CCND2P30279 289 aa15.06■□□□□ 0
TNFRSF1A-207ENST00000535958 THPOP40225 353 aa15.06■□□□□ 0
TNFRSF1A-207ENST00000535958 HSD17B4P51659 736 aa15.06■□□□□ 0
TNFRSF1A-207ENST00000535958 TMEM31Q5JXX7 168 aa15.06■□□□□ 0
TNFRSF1A-207ENST00000535958 ZNF618Q5T7W0 954 aa15.06■□□□□ 0
TNFRSF1A-207ENST00000535958 CHD1LQ86WJ1 897 aa15.06■□□□□ 0
TNFRSF1A-207ENST00000535958 HOMER1Q86YM7 354 aa15.06■□□□□ 0
TNFRSF1A-207ENST00000535958 MLXIPQ9HAP2 919 aa15.06■□□□□ 0
TNFRSF1A-207ENST00000535958 ZSWIM5Q9P217 1185 aa15.06■□□□□ 0
TNFRSF1A-207ENST00000535958 PCDHA1Q9Y5I3 950 aa15.06■□□□□ 0
TNFRSF1A-207ENST00000535958 ERICH2A1L162 156 aa15.05■□□□□ -0
TNFRSF1A-207ENST00000535958 C17orf102A2RUQ5 167 aa15.05■□□□□ -0
TNFRSF1A-207ENST00000535958 LINC01553A4QN01 128 aa15.05■□□□□ -0
TNFRSF1A-207ENST00000535958 KLRF2D3W0D1 207 aa15.05■□□□□ -0
TNFRSF1A-207ENST00000535958 LPXNO60711 386 aa15.05■□□□□ -0
TNFRSF1A-207ENST00000535958 PPFIA4O75335 1185 aa15.05■□□□□ -0
TNFRSF1A-207ENST00000535958 ERVK-21P61565 698 aa15.05■□□□□ -0
TNFRSF1A-207ENST00000535958 CELF3Q5SZQ8 465 aaKnown RBP15.05■□□□□ -0
TNFRSF1A-207ENST00000535958 SPRED2Q7Z698 418 aa15.05■□□□□ -0
TNFRSF1A-207ENST00000535958 MYOCDQ8IZQ8 938 aa15.05■□□□□ -0
TNFRSF1A-207ENST00000535958 SAMD3Q8N6K7 520 aa15.05■□□□□ -0
TNFRSF1A-207ENST00000535958 FBXO22Q8NEZ5 403 aa15.05■□□□□ -0
TNFRSF1A-207ENST00000535958 CTAGE1Q96RT6 745 aa15.05■□□□□ -0
TNFRSF1A-207ENST00000535958 PDCD2LQ9BRP1 358 aa15.05■□□□□ -0
TNFRSF1A-207ENST00000535958 INSL6Q9Y581 213 aa15.05■□□□□ -0
TNFRSF1A-207ENST00000535958 MYH7BA7E2Y1 1941 aa15.05■□□□□ -0
TNFRSF1A-207ENST00000535958 SIP14410 1827 aa15.04■□□□□ -0
TNFRSF1A-207ENST00000535958 RSPH10B2B2RC85 870 aa15.04■□□□□ -0
TNFRSF1A-207ENST00000535958 GCOM1H8Y6P7 765 aaPredicted RBP15.04■□□□□ -0
TNFRSF1A-207ENST00000535958 HAS3O00219 553 aa15.04■□□□□ -0
TNFRSF1A-207ENST00000535958 RSPH10BP0C881 870 aa15.04■□□□□ -0
TNFRSF1A-207ENST00000535958 POLR2MP0CAP2 368 aa15.04■□□□□ -0
TNFRSF1A-207ENST00000535958 HOXA13P31271 388 aaPredicted RBP15.04■□□□□ -0
TNFRSF1A-207ENST00000535958 PGM5Q15124 567 aa15.04■□□□□ -0
TNFRSF1A-207ENST00000535958 PTPROQ16827 1216 aa15.04■□□□□ -0
TNFRSF1A-207ENST00000535958 GNPTABQ3T906 1256 aa15.04■□□□□ -0
TNFRSF1A-207ENST00000535958 MYSM1Q5VVJ2 828 aa15.04■□□□□ -0
TNFRSF1A-207ENST00000535958 PLEKHM2Q8IWE5 1019 aa15.04■□□□□ -0
TNFRSF1A-207ENST00000535958 SMC5Q8IY18 1101 aa15.04■□□□□ -0
TNFRSF1A-207ENST00000535958 ATP6V0A1Q93050 837 aa15.04■□□□□ -0
TNFRSF1A-207ENST00000535958 OSBPL3Q9H4L5 887 aa15.04■□□□□ -0
TNFRSF1A-207ENST00000535958 UBE2ZQ9H832 354 aaPredicted RBP15.04■□□□□ -0
TNFRSF1A-207ENST00000535958 SUGCTQ9HAC7 445 aa15.04■□□□□ -0
TNFRSF1A-207ENST00000535958 TGFB3P10600 412 aa15.03■□□□□ -0
TNFRSF1A-207ENST00000535958 UBA1P22314 1058 aaKnown RBP15.03■□□□□ -0
TNFRSF1A-207ENST00000535958 ZNF200P98182 395 aaPredicted RBP15.03■□□□□ -0
TNFRSF1A-207ENST00000535958 GPNMBQ14956 572 aa15.03■□□□□ -0
TNFRSF1A-207ENST00000535958 HSDL1Q3SXM5 330 aa15.03■□□□□ -0
TNFRSF1A-207ENST00000535958 RALYLQ86SE5 291 aaKnown RBP15.03■□□□□ -0
TNFRSF1A-207ENST00000535958 FCHSD1Q86WN1 690 aa15.03■□□□□ -0
TNFRSF1A-207ENST00000535958 STAG2Q8N3U4 1231 aa15.03■□□□□ -0
TNFRSF1A-207ENST00000535958 SEPT8Q92599 483 aa15.03■□□□□ -0
TNFRSF1A-207ENST00000535958 SAMD11Q96NU1 681 aa15.03■□□□□ -0
TNFRSF1A-207ENST00000535958 YME1L1Q96TA2 773 aa15.03■□□□□ -0
TNFRSF1A-207ENST00000535958 EPHX3Q9H6B9 360 aa15.03■□□□□ -0
TNFRSF1A-207ENST00000535958 REV3LO60673 3130 aa15.03■□□□□ -0
TNFRSF1A-207ENST00000535958 GNAT1P11488 350 aa15.02■□□□□ -0
TNFRSF1A-207ENST00000535958 HOXD8P13378 290 aaPredicted RBP15.02■□□□□ -0
TNFRSF1A-207ENST00000535958 KCNA5P22460 613 aa15.02■□□□□ -0
TNFRSF1A-207ENST00000535958 SSTR3P32745 418 aaPredicted RBP15.02■□□□□ -0
TNFRSF1A-207ENST00000535958 GHRHRQ02643 423 aa15.02■□□□□ -0
TNFRSF1A-207ENST00000535958 NUCB1Q02818 461 aa15.02■□□□□ -0
TNFRSF1A-207ENST00000535958 SART3Q15020 963 aaKnown RBP15.02■□□□□ -0
TNFRSF1A-207ENST00000535958 TRIM71Q2Q1W2 868 aaKnown RBP15.02■□□□□ -0
TNFRSF1A-207ENST00000535958 TIGD5Q53EQ6 642 aa15.02■□□□□ -0
TNFRSF1A-207ENST00000535958 STOX1Q6ZVD7 989 aa15.02■□□□□ -0
TNFRSF1A-207ENST00000535958 SERINC5Q86VE9 423 aa15.02■□□□□ -0
TNFRSF1A-207ENST00000535958 VSIG10LQ86VR7 867 aa15.02■□□□□ -0
TNFRSF1A-207ENST00000535958 DBF4BQ8NFT6 615 aa15.02■□□□□ -0
TNFRSF1A-207ENST00000535958 LRFN3Q9BTN0 628 aa15.02■□□□□ -0
TNFRSF1A-207ENST00000535958 MAD2L2Q9UI95 211 aa15.02■□□□□ -0
TNFRSF1A-207ENST00000535958 ZNF215Q9UL58 517 aaPredicted RBP15.02■□□□□ -0
TNFRSF1A-207ENST00000535958 H3BRB1 525 aa15.01□□□□□ -0.01
TNFRSF1A-207ENST00000535958 CAND2O75155 1236 aa15.01□□□□□ -0.01
TNFRSF1A-207ENST00000535958 CTSHP09668 335 aa15.01□□□□□ -0.01
TNFRSF1A-207ENST00000535958 NEDD9Q14511 834 aa15.01□□□□□ -0.01
TNFRSF1A-207ENST00000535958 TCTN1Q2MV58 587 aa15.01□□□□□ -0.01
TNFRSF1A-207ENST00000535958 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.01□□□□□ -0.01
TNFRSF1A-207ENST00000535958 WNT8BQ93098 351 aa15.01□□□□□ -0.01
TNFRSF1A-207ENST00000535958 PIGSQ96S52 555 aa15.01□□□□□ -0.01
TNFRSF1A-207ENST00000535958 C17orf80Q9BSJ5 609 aa15.01□□□□□ -0.01
TNFRSF1A-207ENST00000535958 TUT1Q9H6E5 874 aaKnown RBP15.01□□□□□ -0.01
TNFRSF1A-207ENST00000535958 MICAL3Q7RTP6 2002 aa15□□□□□ -0.01
TNFRSF1A-207ENST00000535958 OPLAHO14841 1288 aa15□□□□□ -0.01
TNFRSF1A-207ENST00000535958 IFIT3O14879 490 aaKnown RBP15□□□□□ -0.01
TNFRSF1A-207ENST00000535958 STAM2O75886 525 aa15□□□□□ -0.01
TNFRSF1A-207ENST00000535958 RGS20O76081 388 aa15□□□□□ -0.01
TNFRSF1A-207ENST00000535958 UPP2O95045 317 aa15□□□□□ -0.01
TNFRSF1A-207ENST00000535958 LGALS2P05162 132 aa15□□□□□ -0.01
TNFRSF1A-207ENST00000535958 SMIM10L2AP0DMW4 78 aa15□□□□□ -0.01
TNFRSF1A-207ENST00000535958 SMIM10L2BP0DMW5 78 aa15□□□□□ -0.01
TNFRSF1A-207ENST00000535958 MBTPS1Q14703 1052 aa15□□□□□ -0.01
TNFRSF1A-207ENST00000535958 TRAF7Q6Q0C0 670 aa15□□□□□ -0.01
TNFRSF1A-207ENST00000535958 EP400NLQ6ZTU2 488 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms