RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 LARP1BQ659C4 914 aaKnown RBP14.96□□□□□ -0.01
TMEM258-202ENST00000535042 NLRX1Q86UT6 975 aa14.96□□□□□ -0.01
TMEM258-202ENST00000535042 UPF3AQ9H1J1 476 aaKnown RBP14.96□□□□□ -0.01
TMEM258-202ENST00000535042 BRMS1Q9HCU9 246 aa14.96□□□□□ -0.01
TMEM258-202ENST00000535042 KIF3AQ9Y496 699 aa14.96□□□□□ -0.01
TMEM258-202ENST00000535042 FIBPO43427 364 aa14.95□□□□□ -0.02
TMEM258-202ENST00000535042 SORBS3O60504 671 aa14.95□□□□□ -0.02
TMEM258-202ENST00000535042 TDP2O95551 362 aa14.95□□□□□ -0.02
TMEM258-202ENST00000535042 UBA1P22314 1058 aaKnown RBP14.95□□□□□ -0.02
TMEM258-202ENST00000535042 ZNF76P36508 570 aa14.95□□□□□ -0.02
TMEM258-202ENST00000535042 USP11P51784 963 aa14.95□□□□□ -0.02
TMEM258-202ENST00000535042 GJA9P57773 515 aa14.95□□□□□ -0.02
TMEM258-202ENST00000535042 NKX3-2P78367 333 aa14.95□□□□□ -0.02
TMEM258-202ENST00000535042 ARHGAP1Q07960 439 aa14.95□□□□□ -0.02
TMEM258-202ENST00000535042 LRRC41Q15345 812 aa14.95□□□□□ -0.02
TMEM258-202ENST00000535042 SAFBQ15424 915 aaKnown RBP eCLIP14.95□□□□□ -0.02
TMEM258-202ENST00000535042 GNPTABQ3T906 1256 aa14.95□□□□□ -0.02
TMEM258-202ENST00000535042 TLK2Q86UE8 772 aa14.95□□□□□ -0.02
TMEM258-202ENST00000535042 SPRYD3Q8NCJ5 442 aa14.95□□□□□ -0.02
TMEM258-202ENST00000535042 KLHDC9Q8NEP7 349 aa14.95□□□□□ -0.02
TMEM258-202ENST00000535042 GPRASP2Q96D09 838 aa14.95□□□□□ -0.02
TMEM258-202ENST00000535042 Q9Y3F1 56 aa14.95□□□□□ -0.02
TMEM258-202ENST00000535042 WNT7AO00755 349 aa14.94□□□□□ -0.02
TMEM258-202ENST00000535042 NKRFO15226 690 aaKnown RBP eCLIP14.94□□□□□ -0.02
TMEM258-202ENST00000535042 MYCNP04198 464 aaPredicted RBP14.94□□□□□ -0.02
TMEM258-202ENST00000535042 TGFB3P10600 412 aa14.94□□□□□ -0.02
TMEM258-202ENST00000535042 KCNA2P16389 499 aa14.94□□□□□ -0.02
TMEM258-202ENST00000535042 BEX3Q00994 111 aa14.94□□□□□ -0.02
TMEM258-202ENST00000535042 MTMR1Q13613 665 aa14.94□□□□□ -0.02
TMEM258-202ENST00000535042 CCSAPQ6IQ19 270 aaPredicted RBP14.94□□□□□ -0.02
TMEM258-202ENST00000535042 KCNV1Q6PIU1 500 aa14.94□□□□□ -0.02
TMEM258-202ENST00000535042 NIPA1Q7RTP0 329 aa14.94□□□□□ -0.02
TMEM258-202ENST00000535042 PLA2G4DQ86XP0 818 aa14.94□□□□□ -0.02
TMEM258-202ENST00000535042 OR6J1Q8NGC5 347 aa14.94□□□□□ -0.02
TMEM258-202ENST00000535042 DIS3LQ8TF46 1054 aaKnown RBP14.94□□□□□ -0.02
TMEM258-202ENST00000535042 LENG9Q96B70 501 aa14.94□□□□□ -0.02
TMEM258-202ENST00000535042 UIMC1Q96RL1 719 aa14.94□□□□□ -0.02
TMEM258-202ENST00000535042 FOXP1Q9H334 677 aaPredicted RBP14.94□□□□□ -0.02
TMEM258-202ENST00000535042 KCNH7Q9NS40 1196 aa14.94□□□□□ -0.02
TMEM258-202ENST00000535042 PKD2L1Q9P0L9 805 aa14.94□□□□□ -0.02
TMEM258-202ENST00000535042 TELO2Q9Y4R8 837 aa14.94□□□□□ -0.02
TMEM258-202ENST00000535042 CYP3A7-CYP3A51PA0A087WV96 503 aa14.93□□□□□ -0.02
TMEM258-202ENST00000535042 H3BQV1 296 aa14.93□□□□□ -0.02
TMEM258-202ENST00000535042 GGPS1O95749 300 aa14.93□□□□□ -0.02
TMEM258-202ENST00000535042 GH1P01241 217 aa14.93□□□□□ -0.02
TMEM258-202ENST00000535042 C6orf222P0C671 652 aaPredicted RBP14.93□□□□□ -0.02
TMEM258-202ENST00000535042 SYT1P21579 422 aa14.93□□□□□ -0.02
TMEM258-202ENST00000535042 CYP3A7P24462 503 aa14.93□□□□□ -0.02
TMEM258-202ENST00000535042 U2AF2P26368 475 aaKnown RBP eCLIP14.93□□□□□ -0.02
TMEM258-202ENST00000535042 LETM2Q2VYF4 491 aa14.93□□□□□ -0.02
TMEM258-202ENST00000535042 PRR16Q569H4 304 aa14.93□□□□□ -0.02
TMEM258-202ENST00000535042 CELF3Q5SZQ8 465 aaKnown RBP14.93□□□□□ -0.02
TMEM258-202ENST00000535042 IFFO2Q5TF58 517 aa14.93□□□□□ -0.02
TMEM258-202ENST00000535042 MYSM1Q5VVJ2 828 aa14.93□□□□□ -0.02
TMEM258-202ENST00000535042 NEK8Q86SG6 692 aa14.93□□□□□ -0.02
TMEM258-202ENST00000535042 ARRDC4Q8NCT1 418 aa14.93□□□□□ -0.02
TMEM258-202ENST00000535042 MBOAT7Q96N66 472 aa14.93□□□□□ -0.02
TMEM258-202ENST00000535042 AP5M1Q9H0R1 490 aa14.93□□□□□ -0.02
TMEM258-202ENST00000535042 AGO4Q9HCK5 861 aaKnown RBP14.93□□□□□ -0.02
TMEM258-202ENST00000535042 MAFGO15525 162 aa14.92□□□□□ -0.02
TMEM258-202ENST00000535042 CAPN15O75808 1086 aa14.92□□□□□ -0.02
TMEM258-202ENST00000535042 CST5P28325 142 aaPredicted RBP14.92□□□□□ -0.02
TMEM258-202ENST00000535042 ITGB3BPQ13352 177 aaPredicted RBP14.92□□□□□ -0.02
TMEM258-202ENST00000535042 GNASQ5JWF2 1037 aa14.92□□□□□ -0.02
TMEM258-202ENST00000535042 CYFIP1Q7L576 1253 aa14.92□□□□□ -0.02
TMEM258-202ENST00000535042 UBE2Q1Q7Z7E8 422 aa14.92□□□□□ -0.02
TMEM258-202ENST00000535042 RNF180Q86T96 592 aa14.92□□□□□ -0.02
TMEM258-202ENST00000535042 NOSTRINQ8IVI9 506 aa14.92□□□□□ -0.02
TMEM258-202ENST00000535042 DHX37Q8IY37 1157 aaKnown RBP14.92□□□□□ -0.02
TMEM258-202ENST00000535042 AFG1LQ8WV93 481 aa14.92□□□□□ -0.02
TMEM258-202ENST00000535042 CDHR1Q96JP9 859 aa14.92□□□□□ -0.02
TMEM258-202ENST00000535042 SENP7Q9BQF6 1050 aa14.92□□□□□ -0.02
TMEM258-202ENST00000535042 KIAA0100Q14667 2235 aaKnown RBP14.92□□□□□ -0.02
TMEM258-202ENST00000535042 A6NJR5 290 aa14.91□□□□□ -0.02
TMEM258-202ENST00000535042 DNM1LO00429 736 aa14.91□□□□□ -0.02
TMEM258-202ENST00000535042 MSH4O15457 936 aa14.91□□□□□ -0.02
TMEM258-202ENST00000535042 SLC37A4O43826 429 aa14.91□□□□□ -0.02
TMEM258-202ENST00000535042 FARP2O94887 1054 aaPredicted RBP14.91□□□□□ -0.02
TMEM258-202ENST00000535042 HSP90AA1P07900 732 aaKnown RBP14.91□□□□□ -0.02
TMEM258-202ENST00000535042 HOXD11P31277 338 aaPredicted RBP14.91□□□□□ -0.02
TMEM258-202ENST00000535042 LAMC2Q13753 1193 aa14.91□□□□□ -0.02
TMEM258-202ENST00000535042 NEDD9Q14511 834 aa14.91□□□□□ -0.02
TMEM258-202ENST00000535042 KCNA10Q16322 511 aa14.91□□□□□ -0.02
TMEM258-202ENST00000535042 FSCN1Q16658 493 aaKnown RBP14.91□□□□□ -0.02
TMEM258-202ENST00000535042 HSDL1Q3SXM5 330 aa14.91□□□□□ -0.02
TMEM258-202ENST00000535042 Q4G0T1 1027 aa14.91□□□□□ -0.02
TMEM258-202ENST00000535042 MCTP1Q6DN14 999 aa14.91□□□□□ -0.02
TMEM258-202ENST00000535042 MOXD1Q6UVY6 613 aa14.91□□□□□ -0.02
TMEM258-202ENST00000535042 ANKLE1Q8NAG6 615 aa14.91□□□□□ -0.02
TMEM258-202ENST00000535042 GJA10Q969M2 543 aa14.91□□□□□ -0.02
TMEM258-202ENST00000535042 EMID1Q96A84 441 aaPredicted RBP14.91□□□□□ -0.02
TMEM258-202ENST00000535042 PAWRQ96IZ0 340 aaKnown RBP14.91□□□□□ -0.02
TMEM258-202ENST00000535042 MLXIPQ9HAP2 919 aa14.91□□□□□ -0.02
TMEM258-202ENST00000535042 SPC25Q9HBM1 224 aa14.91□□□□□ -0.02
TMEM258-202ENST00000535042 MTMR6Q9Y217 621 aa14.91□□□□□ -0.02
TMEM258-202ENST00000535042 KIAA1217Q5T5P2 1943 aa14.91□□□□□ -0.02
TMEM258-202ENST00000535042 MYH7BA7E2Y1 1941 aa14.9□□□□□ -0.02
TMEM258-202ENST00000535042 FRMPD3Q5JV73 1810 aa14.9□□□□□ -0.02
TMEM258-202ENST00000535042 VPS37CA5D8V6 355 aaPredicted RBP14.9□□□□□ -0.02
TMEM258-202ENST00000535042 DHX15O43143 795 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms