RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 FCHSD1Q86WN1 690 aa21.75■■□□□ 1.07
NDUFS3-213ENST00000534716 AFAP1L1Q8TED9 768 aa21.75■■□□□ 1.07
NDUFS3-213ENST00000534716 ANO2Q9NQ90 1003 aa21.75■■□□□ 1.07
NDUFS3-213ENST00000534716 CHD7Q9P2D1 2997 aa21.74■■□□□ 1.07
NDUFS3-213ENST00000534716 ACTN1P12814 892 aa21.74■■□□□ 1.07
NDUFS3-213ENST00000534716 MRPS9P82933 396 aaKnown RBP21.74■■□□□ 1.07
NDUFS3-213ENST00000534716 MFSD10Q14728 455 aa21.74■■□□□ 1.07
NDUFS3-213ENST00000534716 GNPTABQ3T906 1256 aa21.74■■□□□ 1.07
NDUFS3-213ENST00000534716 XRRA1Q6P2D8 792 aa21.74■■□□□ 1.07
NDUFS3-213ENST00000534716 NFXL1Q6ZNB6 911 aa21.74■■□□□ 1.07
NDUFS3-213ENST00000534716 DEFB128Q7Z7B8 93 aa21.74■■□□□ 1.07
NDUFS3-213ENST00000534716 SGMS1Q86VZ5 419 aa21.74■■□□□ 1.07
NDUFS3-213ENST00000534716 SRBD1Q8N5C6 995 aaKnown RBP21.74■■□□□ 1.07
NDUFS3-213ENST00000534716 C7orf31Q8N865 590 aa21.74■■□□□ 1.07
NDUFS3-213ENST00000534716 SPATA33Q96N06 139 aa21.74■■□□□ 1.07
NDUFS3-213ENST00000534716 HDAC6Q9UBN7 1215 aa21.74■■□□□ 1.07
NDUFS3-213ENST00000534716 SEC63Q9UGP8 760 aaKnown RBP21.74■■□□□ 1.07
NDUFS3-213ENST00000534716 YBX2Q9Y2T7 364 aaKnown RBP21.74■■□□□ 1.07
NDUFS3-213ENST00000534716 PCDHA11Q9Y5I1 949 aa21.74■■□□□ 1.07
NDUFS3-213ENST00000534716 SPATA31C2B4DYI2 1134 aa21.73■■□□□ 1.07
NDUFS3-213ENST00000534716 MEIS2O14770 477 aa21.73■■□□□ 1.07
NDUFS3-213ENST00000534716 PARNO95453 639 aaKnown RBP21.73■■□□□ 1.07
NDUFS3-213ENST00000534716 ATP2A2P16615 1042 aaKnown RBP21.73■■□□□ 1.07
NDUFS3-213ENST00000534716 CHMP4BP1P59074 171 aa21.73■■□□□ 1.07
NDUFS3-213ENST00000534716 KIAA0753Q2KHM9 967 aa21.73■■□□□ 1.07
NDUFS3-213ENST00000534716 PHOSPHO2Q8TCD6 241 aa21.73■■□□□ 1.07
NDUFS3-213ENST00000534716 DHX38Q92620 1227 aaKnown RBP21.73■■□□□ 1.07
NDUFS3-213ENST00000534716 SLC28A3Q9HAS3 691 aa21.73■■□□□ 1.07
NDUFS3-213ENST00000534716 ZBBXA8MT70 800 aa21.72■■□□□ 1.07
NDUFS3-213ENST00000534716 BAIAP3O94812 1187 aa21.72■■□□□ 1.07
NDUFS3-213ENST00000534716 PLEKHA8P1O95397 391 aa21.72■■□□□ 1.07
NDUFS3-213ENST00000534716 ZNF286BP0CG31 522 aa21.72■■□□□ 1.07
NDUFS3-213ENST00000534716 SELPP16109 830 aa21.72■■□□□ 1.07
NDUFS3-213ENST00000534716 PTK7Q13308 1070 aa21.72■■□□□ 1.07
NDUFS3-213ENST00000534716 TSGA10IPQ3SY00 556 aa21.72■■□□□ 1.07
NDUFS3-213ENST00000534716 RNF20Q5VTR2 975 aa21.72■■□□□ 1.07
NDUFS3-213ENST00000534716 PIBF1Q8WXW3 757 aa21.72■■□□□ 1.07
NDUFS3-213ENST00000534716 GPKOWQ92917 476 aaPredicted RBP eCLIP21.72■■□□□ 1.075e-7■■■□□ 19
NDUFS3-213ENST00000534716 C16orf70Q9BSU1 422 aa21.72■■□□□ 1.07
NDUFS3-213ENST00000534716 NKX2-4Q9H2Z4 354 aa21.72■■□□□ 1.07
NDUFS3-213ENST00000534716 MLXIPQ9HAP2 919 aa21.72■■□□□ 1.07
NDUFS3-213ENST00000534716 SLC12A7Q9Y666 1083 aa21.72■■□□□ 1.07
NDUFS3-213ENST00000534716 GPNMBQ14956 572 aa21.71■■□□□ 1.07
NDUFS3-213ENST00000534716 PCNX4Q63HM2 1172 aa21.71■■□□□ 1.07
NDUFS3-213ENST00000534716 USP17L6PQ6QN14 398 aa21.71■■□□□ 1.07
NDUFS3-213ENST00000534716 FANCBQ8NB91 859 aa21.71■■□□□ 1.07
NDUFS3-213ENST00000534716 SMARCC2Q8TAQ2 1214 aa21.71■■□□□ 1.07
NDUFS3-213ENST00000534716 CUL5Q93034 780 aa21.71■■□□□ 1.07
NDUFS3-213ENST00000534716 SLC9A7Q96T83 725 aa21.71■■□□□ 1.07
NDUFS3-213ENST00000534716 GAS2L1Q99501 681 aaPredicted RBP21.71■■□□□ 1.07
NDUFS3-213ENST00000534716 ALG1Q9BT22 464 aa21.71■■□□□ 1.07
NDUFS3-213ENST00000534716 TANC1Q9C0D5 1861 aa21.71■■□□□ 1.07
NDUFS3-213ENST00000534716 FIBPO43427 364 aa21.7■■□□□ 1.06
NDUFS3-213ENST00000534716 CXCL10P02778 98 aa21.7■■□□□ 1.06
NDUFS3-213ENST00000534716 CKBP12277 381 aa21.7■■□□□ 1.06
NDUFS3-213ENST00000534716 RABGGTBP53611 331 aa21.7■■□□□ 1.06
NDUFS3-213ENST00000534716 SEMA3FQ13275 785 aa21.7■■□□□ 1.06
NDUFS3-213ENST00000534716 NEDD9Q14511 834 aa21.7■■□□□ 1.06
NDUFS3-213ENST00000534716 METTL7BQ6UX53 244 aa21.7■■□□□ 1.06
NDUFS3-213ENST00000534716 LRRC8DQ7L1W4 858 aa21.7■■□□□ 1.06
NDUFS3-213ENST00000534716 ZFP91Q96JP5 570 aaPredicted RBP21.7■■□□□ 1.06
NDUFS3-213ENST00000534716 SENP7Q9BQF6 1050 aa21.7■■□□□ 1.06
NDUFS3-213ENST00000534716 FTOQ9C0B1 505 aaKnown RBP eCLIP21.7■■□□□ 1.06
NDUFS3-213ENST00000534716 PRDM12Q9H4Q4 367 aa21.7■■□□□ 1.06
NDUFS3-213ENST00000534716 RXRAP19793 462 aa21.69■■□□□ 1.06
NDUFS3-213ENST00000534716 HOXC8P31273 242 aa21.69■■□□□ 1.06
NDUFS3-213ENST00000534716 EXOSC10Q01780 885 aaKnown RBP21.69■■□□□ 1.06
NDUFS3-213ENST00000534716 TRIM71Q2Q1W2 868 aaKnown RBP21.69■■□□□ 1.06
NDUFS3-213ENST00000534716 TMTC3Q6ZXV5 915 aa21.69■■□□□ 1.06
NDUFS3-213ENST00000534716 SKAP1Q86WV1 359 aa21.69■■□□□ 1.06
NDUFS3-213ENST00000534716 USP26Q9BXU7 913 aa21.69■■□□□ 1.06
NDUFS3-213ENST00000534716 BAZ2BQ9UIF8 2168 aaKnown RBP21.69■■□□□ 1.06
NDUFS3-213ENST00000534716 H3BRB1 525 aa21.68■■□□□ 1.06
NDUFS3-213ENST00000534716 TRAF7Q6Q0C0 670 aa21.68■■□□□ 1.06
NDUFS3-213ENST00000534716 TEX2Q8IWB9 1127 aa21.68■■□□□ 1.06
NDUFS3-213ENST00000534716 CMTR1Q8N1G2 835 aaKnown RBP21.68■■□□□ 1.06
NDUFS3-213ENST00000534716 NEK1Q96PY6 1258 aa21.68■■□□□ 1.06
NDUFS3-213ENST00000534716 LRRC2Q9BYS8 371 aa21.68■■□□□ 1.06
NDUFS3-213ENST00000534716 TUT1Q9H6E5 874 aaKnown RBP21.68■■□□□ 1.06
NDUFS3-213ENST00000534716 BCAS3Q9H6U6 928 aa21.68■■□□□ 1.06
NDUFS3-213ENST00000534716 PSTPIP2Q9H939 334 aa21.68■■□□□ 1.06
NDUFS3-213ENST00000534716 TRANK1O15050 2925 aa21.67■■□□□ 1.06
NDUFS3-213ENST00000534716 MYOGP15173 224 aa21.67■■□□□ 1.06
NDUFS3-213ENST00000534716 ADGRE1Q14246 886 aa21.67■■□□□ 1.06
NDUFS3-213ENST00000534716 HIC1Q14526 733 aa21.67■■□□□ 1.06
NDUFS3-213ENST00000534716 PPP2R2DQ66LE6 453 aa21.67■■□□□ 1.06
NDUFS3-213ENST00000534716 RTEL1Q9NZ71 1219 aa21.67■■□□□ 1.06
NDUFS3-213ENST00000534716 SORBS3O60504 671 aa21.66■■□□□ 1.06
NDUFS3-213ENST00000534716 NBNO60934 754 aa21.66■■□□□ 1.06
NDUFS3-213ENST00000534716 CDC45O75419 566 aa21.66■■□□□ 1.06
NDUFS3-213ENST00000534716 LGALS2P05162 132 aa21.66■■□□□ 1.06
NDUFS3-213ENST00000534716 ZNF200P98182 395 aaPredicted RBP21.66■■□□□ 1.06
NDUFS3-213ENST00000534716 CNKSR3Q6P9H4 555 aa21.66■■□□□ 1.06
NDUFS3-213ENST00000534716 APOA5Q6Q788 366 aa21.66■■□□□ 1.06
NDUFS3-213ENST00000534716 SYNE3Q6ZMZ3 975 aa21.66■■□□□ 1.06
NDUFS3-213ENST00000534716 CYFIP1Q7L576 1253 aa21.66■■□□□ 1.06
NDUFS3-213ENST00000534716 DHX32Q7L7V1 743 aaKnown RBP21.66■■□□□ 1.06
NDUFS3-213ENST00000534716 NLRX1Q86UT6 975 aa21.66■■□□□ 1.06
NDUFS3-213ENST00000534716 SERINC5Q86VE9 423 aa21.66■■□□□ 1.06
NDUFS3-213ENST00000534716 HERC6Q8IVU3 1022 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms