RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 USP17L6PQ6QN14 398 aa10.29□□□□□ -0.76
COPB1-211ENST00000534234 CENPQQ7L2Z9 268 aaPredicted RBP10.29□□□□□ -0.76
COPB1-211ENST00000534234 SKAP1Q86WV1 359 aa10.29□□□□□ -0.76
COPB1-211ENST00000534234 CMTR1Q8N1G2 835 aaKnown RBP10.29□□□□□ -0.76
COPB1-211ENST00000534234 SRBD1Q8N5C6 995 aaKnown RBP10.29□□□□□ -0.76
COPB1-211ENST00000534234 CCDC155Q8N6L0 562 aa10.29□□□□□ -0.76
COPB1-211ENST00000534234 CAGE1Q8TC20 777 aa10.29□□□□□ -0.76
COPB1-211ENST00000534234 GPKOWQ92917 476 aaPredicted RBP eCLIP10.29□□□□□ -0.769e-7■■■■□ 21.1
COPB1-211ENST00000534234 CTAGE1Q96RT6 745 aa10.29□□□□□ -0.76
COPB1-211ENST00000534234 GAS2L1Q99501 681 aaPredicted RBP10.29□□□□□ -0.76
COPB1-211ENST00000534234 KATNAL1Q9BW62 490 aa10.29□□□□□ -0.76
COPB1-211ENST00000534234 PRDM12Q9H4Q4 367 aa10.29□□□□□ -0.76
COPB1-211ENST00000534234 RTEL1Q9NZ71 1219 aa10.29□□□□□ -0.76
COPB1-211ENST00000534234 SEC63Q9UGP8 760 aaKnown RBP10.29□□□□□ -0.76
COPB1-211ENST00000534234 GTF2IRD1Q9UHL9 959 aa10.29□□□□□ -0.76
COPB1-211ENST00000534234 YBX2Q9Y2T7 364 aaKnown RBP10.29□□□□□ -0.76
COPB1-211ENST00000534234 LAMA4Q16363 1823 aa10.29□□□□□ -0.76
COPB1-211ENST00000534234 HAS3O00219 553 aa10.28□□□□□ -0.76
COPB1-211ENST00000534234 PLEKHA8P1O95397 391 aa10.28□□□□□ -0.76
COPB1-211ENST00000534234 F2P00734 622 aa10.28□□□□□ -0.76
COPB1-211ENST00000534234 ZNF286BP0CG31 522 aa10.28□□□□□ -0.76
COPB1-211ENST00000534234 CALM1P0DP23 149 aa10.28□□□□□ -0.76
COPB1-211ENST00000534234 CALM2P0DP24 149 aa10.28□□□□□ -0.76
COPB1-211ENST00000534234 CALM3P0DP25 149 aa10.28□□□□□ -0.76
COPB1-211ENST00000534234 HOXD8P13378 290 aaPredicted RBP10.28□□□□□ -0.76
COPB1-211ENST00000534234 MYOGP15173 224 aa10.28□□□□□ -0.76
COPB1-211ENST00000534234 RXRAP19793 462 aa10.28□□□□□ -0.76
COPB1-211ENST00000534234 UBA1P22314 1058 aaKnown RBP10.28□□□□□ -0.76
COPB1-211ENST00000534234 MRPS9P82933 396 aaKnown RBP10.28□□□□□ -0.76
COPB1-211ENST00000534234 GNPTABQ3T906 1256 aa10.28□□□□□ -0.76
COPB1-211ENST00000534234 CCDC82Q8N4S0 544 aa10.28□□□□□ -0.76
COPB1-211ENST00000534234 SMARCC2Q8TAQ2 1214 aa10.28□□□□□ -0.76
COPB1-211ENST00000534234 AFAP1L1Q8TED9 768 aa10.28□□□□□ -0.76
COPB1-211ENST00000534234 CUL5Q93034 780 aa10.28□□□□□ -0.76
COPB1-211ENST00000534234 LRRC2Q9BYS8 371 aa10.28□□□□□ -0.76
COPB1-211ENST00000534234 BCAS3Q9H6U6 928 aa10.28□□□□□ -0.76
COPB1-211ENST00000534234 PCDHA11Q9Y5I1 949 aa10.28□□□□□ -0.76
COPB1-211ENST00000534234 SLC12A7Q9Y666 1083 aa10.28□□□□□ -0.76
COPB1-211ENST00000534234 MEIS2O14770 477 aa10.27□□□□□ -0.76
COPB1-211ENST00000534234 STAM2O75886 525 aa10.27□□□□□ -0.76
COPB1-211ENST00000534234 SELPP16109 830 aa10.27□□□□□ -0.76
COPB1-211ENST00000534234 RNF20Q5VTR2 975 aa10.27□□□□□ -0.76
COPB1-211ENST00000534234 RAB11FIP4Q86YS3 637 aa10.27□□□□□ -0.76
COPB1-211ENST00000534234 FANCBQ8NB91 859 aa10.27□□□□□ -0.76
COPB1-211ENST00000534234 PHOSPHO2Q8TCD6 241 aa10.27□□□□□ -0.76
COPB1-211ENST00000534234 DHX38Q92620 1227 aaKnown RBP10.27□□□□□ -0.76
COPB1-211ENST00000534234 INPP4AQ96PE3 977 aaPredicted RBP10.27□□□□□ -0.76
COPB1-211ENST00000534234 C16orf70Q9BSU1 422 aa10.27□□□□□ -0.76
COPB1-211ENST00000534234 COL25A1Q9BXS0 654 aaPredicted RBP10.27□□□□□ -0.76
COPB1-211ENST00000534234 SPATA31C2B4DYI2 1134 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 H3BRB1 525 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 PIK3CDO00329 1044 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 NOP56O00567 594 aaKnown RBP10.26□□□□□ -0.77
COPB1-211ENST00000534234 CKBP12277 381 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 IGFBP4P22692 258 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 ICAM3P32942 547 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 ZNF200P98182 395 aaPredicted RBP10.26□□□□□ -0.77
COPB1-211ENST00000534234 PTK7Q13308 1070 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 NEDD9Q14511 834 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 GPNMBQ14956 572 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 PPP2R2DQ66LE6 453 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 SYNE3Q6ZMZ3 975 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 LRRC8DQ7L1W4 858 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 CYFIP1Q7L576 1253 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 PPM1EQ8WY54 764 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 NEK1Q96PY6 1258 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 TUT1Q9H6E5 874 aaKnown RBP10.26□□□□□ -0.77
COPB1-211ENST00000534234 PSTPIP2Q9H939 334 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 FRMPD4Q14CM0 1322 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 A0A0C4DFX4 3053 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 hCG_1642624A0A1W2PR95 340 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 KIF28PB7ZC32 967 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 FIBPO43427 364 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 BAIAP3O94812 1187 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 PARNO95453 639 aaKnown RBP10.26□□□□□ -0.77
COPB1-211ENST00000534234 RBL2Q08999 1139 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 ADGRE1Q14246 886 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 PCNX4Q63HM2 1172 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 XRRA1Q6P2D8 792 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 METTL7BQ6UX53 244 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 SGMS1Q86VZ5 419 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 USP38Q8NB14 1042 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 SLC9A7Q96T83 725 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 USP26Q9BXU7 913 aa10.26□□□□□ -0.77
COPB1-211ENST00000534234 NBNO60934 754 aa10.25□□□□□ -0.77
COPB1-211ENST00000534234 LGALS2P05162 132 aa10.25□□□□□ -0.77
COPB1-211ENST00000534234 CA3P07451 260 aa10.25□□□□□ -0.77
COPB1-211ENST00000534234 KCNJ6P48051 423 aa10.25□□□□□ -0.77
COPB1-211ENST00000534234 EXOSC10Q01780 885 aaKnown RBP10.25□□□□□ -0.77
COPB1-211ENST00000534234 SEMA3FQ13275 785 aa10.25□□□□□ -0.77
COPB1-211ENST00000534234 HIC1Q14526 733 aa10.25□□□□□ -0.77
COPB1-211ENST00000534234 CCDC85BQ15834 202 aaPredicted RBP10.25□□□□□ -0.77
COPB1-211ENST00000534234 TRIM71Q2Q1W2 868 aaKnown RBP10.25□□□□□ -0.77
COPB1-211ENST00000534234 TSGA10IPQ3SY00 556 aa10.25□□□□□ -0.77
COPB1-211ENST00000534234 ZNF618Q5T7W0 954 aa10.25□□□□□ -0.77
COPB1-211ENST00000534234 TMTC3Q6ZXV5 915 aa10.25□□□□□ -0.77
COPB1-211ENST00000534234 DHX32Q7L7V1 743 aaKnown RBP10.25□□□□□ -0.77
COPB1-211ENST00000534234 NLRX1Q86UT6 975 aa10.25□□□□□ -0.77
COPB1-211ENST00000534234 MICU3Q86XE3 530 aa10.25□□□□□ -0.77
COPB1-211ENST00000534234 HERC6Q8IVU3 1022 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms