RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 RRP36Q96EU6 259 aaKnown RBP20.14■□□□□ 0.81
VPS51-213ENST00000533827 LZTS2Q9BRK4 669 aa20.14■□□□□ 0.81
VPS51-213ENST00000533827 NKX2-4Q9H2Z4 354 aa20.14■□□□□ 0.81
VPS51-213ENST00000533827 CCDC69A6NI79 296 aa20.13■□□□□ 0.81
VPS51-213ENST00000533827 PLEKHA8P1O95397 391 aa20.13■□□□□ 0.81
VPS51-213ENST00000533827 ZNF286BP0CG31 522 aa20.13■□□□□ 0.81
VPS51-213ENST00000533827 RABGGTBP53611 331 aa20.13■□□□□ 0.81
VPS51-213ENST00000533827 MFSD10Q14728 455 aa20.13■□□□□ 0.81
VPS51-213ENST00000533827 KIAA0753Q2KHM9 967 aa20.13■□□□□ 0.81
VPS51-213ENST00000533827 CENPQQ7L2Z9 268 aaPredicted RBP20.13■□□□□ 0.81
VPS51-213ENST00000533827 SRBD1Q8N5C6 995 aaKnown RBP20.13■□□□□ 0.81
VPS51-213ENST00000533827 CCDC155Q8N6L0 562 aa20.13■□□□□ 0.81
VPS51-213ENST00000533827 C7orf31Q8N865 590 aa20.13■□□□□ 0.81
VPS51-213ENST00000533827 SPATA33Q96N06 139 aa20.13■□□□□ 0.81
VPS51-213ENST00000533827 ALG1Q9BT22 464 aa20.13■□□□□ 0.81
VPS51-213ENST00000533827 PRDM12Q9H4Q4 367 aa20.13■□□□□ 0.81
VPS51-213ENST00000533827 SLC28A3Q9HAS3 691 aa20.13■□□□□ 0.81
VPS51-213ENST00000533827 ANO2Q9NQ90 1003 aa20.13■□□□□ 0.81
VPS51-213ENST00000533827 PCDHA11Q9Y5I1 949 aa20.13■□□□□ 0.81
VPS51-213ENST00000533827 SORBS3O60504 671 aa20.12■□□□□ 0.81
VPS51-213ENST00000533827 STAM2O75886 525 aa20.12■□□□□ 0.81
VPS51-213ENST00000533827 ACTN1P12814 892 aa20.12■□□□□ 0.81
VPS51-213ENST00000533827 ATP2A2P16615 1042 aaKnown RBP20.12■□□□□ 0.81
VPS51-213ENST00000533827 ICAM3P32942 547 aa20.12■□□□□ 0.81
VPS51-213ENST00000533827 GNAQP50148 359 aa20.12■□□□□ 0.81
VPS51-213ENST00000533827 RBL2Q08999 1139 aa20.12■□□□□ 0.81
VPS51-213ENST00000533827 NFXL1Q6ZNB6 911 aa20.12■□□□□ 0.81
VPS51-213ENST00000533827 TRIP12Q14669 1992 aaPredicted RBP20.12■□□□□ 0.81
VPS51-213ENST00000533827 CHD7Q9P2D1 2997 aa20.11■□□□□ 0.81
VPS51-213ENST00000533827 PIK3CDO00329 1044 aa20.11■□□□□ 0.81
VPS51-213ENST00000533827 MEIS2O14770 477 aa20.11■□□□□ 0.81
VPS51-213ENST00000533827 CALM1P0DP23 149 aa20.11■□□□□ 0.81
VPS51-213ENST00000533827 CALM2P0DP24 149 aa20.11■□□□□ 0.81
VPS51-213ENST00000533827 CALM3P0DP25 149 aa20.11■□□□□ 0.81
VPS51-213ENST00000533827 MYOGP15173 224 aa20.11■□□□□ 0.81
VPS51-213ENST00000533827 SELPP16109 830 aa20.11■□□□□ 0.81
VPS51-213ENST00000533827 RXRAP19793 462 aa20.11■□□□□ 0.81
VPS51-213ENST00000533827 GPNMBQ14956 572 aa20.11■□□□□ 0.81
VPS51-213ENST00000533827 GNPTABQ3T906 1256 aa20.11■□□□□ 0.81
VPS51-213ENST00000533827 USP17L6PQ6QN14 398 aa20.11■□□□□ 0.81
VPS51-213ENST00000533827 USP38Q8NB14 1042 aa20.11■□□□□ 0.81
VPS51-213ENST00000533827 INPP4AQ96PE3 977 aaPredicted RBP20.11■□□□□ 0.81
VPS51-213ENST00000533827 GAS2L1Q99501 681 aaPredicted RBP20.11■□□□□ 0.81
VPS51-213ENST00000533827 C16orf70Q9BSU1 422 aa20.11■□□□□ 0.81
VPS51-213ENST00000533827 COL25A1Q9BXS0 654 aaPredicted RBP20.11■□□□□ 0.81
VPS51-213ENST00000533827 FTOQ9C0B1 505 aaKnown RBP eCLIP20.11■□□□□ 0.81
VPS51-213ENST00000533827 BCAS3Q9H6U6 928 aa20.11■□□□□ 0.81
VPS51-213ENST00000533827 MLXIPQ9HAP2 919 aa20.11■□□□□ 0.81
VPS51-213ENST00000533827 SEC63Q9UGP8 760 aaKnown RBP20.11■□□□□ 0.81
VPS51-213ENST00000533827 ADGRE1Q14246 886 aa20.1■□□□□ 0.81
VPS51-213ENST00000533827 LRRC8DQ7L1W4 858 aa20.1■□□□□ 0.81
VPS51-213ENST00000533827 SGMS1Q86VZ5 419 aa20.1■□□□□ 0.81
VPS51-213ENST00000533827 CMTR1Q8N1G2 835 aaKnown RBP20.1■□□□□ 0.81
VPS51-213ENST00000533827 SMARCC2Q8TAQ2 1214 aa20.1■□□□□ 0.81
VPS51-213ENST00000533827 PHOSPHO2Q8TCD6 241 aa20.1■□□□□ 0.81
VPS51-213ENST00000533827 SLC9A7Q96T83 725 aa20.1■□□□□ 0.81
VPS51-213ENST00000533827 LRRC2Q9BYS8 371 aa20.1■□□□□ 0.81
VPS51-213ENST00000533827 SLC12A7Q9Y666 1083 aa20.1■□□□□ 0.81
VPS51-213ENST00000533827 VCANP13611 3396 aa20.09■□□□□ 0.81
VPS51-213ENST00000533827 SPATA31C2B4DYI2 1134 aa20.09■□□□□ 0.81
VPS51-213ENST00000533827 CKBP12277 381 aa20.09■□□□□ 0.81
VPS51-213ENST00000533827 SEMA3FQ13275 785 aa20.09■□□□□ 0.81
VPS51-213ENST00000533827 PTK7Q13308 1070 aa20.09■□□□□ 0.81
VPS51-213ENST00000533827 HIC1Q14526 733 aa20.09■□□□□ 0.81
VPS51-213ENST00000533827 TRIM71Q2Q1W2 868 aaKnown RBP20.09■□□□□ 0.81
VPS51-213ENST00000533827 CUL5Q93034 780 aa20.09■□□□□ 0.81
VPS51-213ENST00000533827 RTEL1Q9NZ71 1219 aa20.09■□□□□ 0.81
VPS51-213ENST00000533827 TET1Q8NFU7 2136 aa20.09■□□□□ 0.81
VPS51-213ENST00000533827 FIBPO43427 364 aa20.08■□□□□ 0.81
VPS51-213ENST00000533827 BAIAP3O94812 1187 aa20.08■□□□□ 0.81
VPS51-213ENST00000533827 PARNO95453 639 aaKnown RBP20.08■□□□□ 0.81
VPS51-213ENST00000533827 CXCL10P02778 98 aa20.08■□□□□ 0.81
VPS51-213ENST00000533827 ZNF200P98182 395 aaPredicted RBP20.08■□□□□ 0.81
VPS51-213ENST00000533827 NEDD9Q14511 834 aa20.08■□□□□ 0.81
VPS51-213ENST00000533827 PCNX4Q63HM2 1172 aa20.08■□□□□ 0.81
VPS51-213ENST00000533827 PPP2R2DQ66LE6 453 aa20.08■□□□□ 0.81
VPS51-213ENST00000533827 RAB11FIP4Q86YS3 637 aa20.08■□□□□ 0.81
VPS51-213ENST00000533827 FANCBQ8NB91 859 aa20.08■□□□□ 0.81
VPS51-213ENST00000533827 WNT8BQ93098 351 aa20.08■□□□□ 0.81
VPS51-213ENST00000533827 NBNO60934 754 aa20.07■□□□□ 0.8
VPS51-213ENST00000533827 RNF20Q5VTR2 975 aa20.07■□□□□ 0.8
VPS51-213ENST00000533827 XRRA1Q6P2D8 792 aa20.07■□□□□ 0.8
VPS51-213ENST00000533827 TRAF7Q6Q0C0 670 aa20.07■□□□□ 0.8
VPS51-213ENST00000533827 METTL7BQ6UX53 244 aa20.07■□□□□ 0.8
VPS51-213ENST00000533827 TMTC3Q6ZXV5 915 aa20.07■□□□□ 0.8
VPS51-213ENST00000533827 NEK1Q96PY6 1258 aa20.07■□□□□ 0.8
VPS51-213ENST00000533827 PTPRSQ13332 1948 aa20.06■□□□□ 0.8
VPS51-213ENST00000533827 H3BRB1 525 aa20.06■□□□□ 0.8
VPS51-213ENST00000533827 LGALS2P05162 132 aa20.06■□□□□ 0.8
VPS51-213ENST00000533827 HOXC8P31273 242 aa20.06■□□□□ 0.8
VPS51-213ENST00000533827 EXOSC10Q01780 885 aaKnown RBP20.06■□□□□ 0.8
VPS51-213ENST00000533827 TSGA10IPQ3SY00 556 aa20.06■□□□□ 0.8
VPS51-213ENST00000533827 CYFIP1Q7L576 1253 aa20.06■□□□□ 0.8
VPS51-213ENST00000533827 HERC6Q8IVU3 1022 aa20.06■□□□□ 0.8
VPS51-213ENST00000533827 GPR20Q99678 358 aa20.06■□□□□ 0.8
VPS51-213ENST00000533827 SENP7Q9BQF6 1050 aa20.06■□□□□ 0.8
VPS51-213ENST00000533827 TUT1Q9H6E5 874 aaKnown RBP20.06■□□□□ 0.8
VPS51-213ENST00000533827 DOCK5Q9H7D0 1870 aa20.06■□□□□ 0.8
VPS51-213ENST00000533827 PSTPIP2Q9H939 334 aa20.06■□□□□ 0.8
VPS51-213ENST00000533827 SPTBN5Q9NRC6 3674 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms