RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 RAB30Q15771 203 aa13.07□□□□□ -0.32
CLCF1-202ENST00000533438 PTGISQ16647 500 aa13.07□□□□□ -0.32
CLCF1-202ENST00000533438 CELF3Q5SZQ8 465 aaKnown RBP13.07□□□□□ -0.32
CLCF1-202ENST00000533438 DEFB128Q7Z7B8 93 aa13.07□□□□□ -0.32
CLCF1-202ENST00000533438 FCHSD1Q86WN1 690 aa13.07□□□□□ -0.32
CLCF1-202ENST00000533438 TMTC2Q8N394 836 aa13.07□□□□□ -0.32
CLCF1-202ENST00000533438 GPKOWQ92917 476 aaPredicted RBP eCLIP13.07□□□□□ -0.32
CLCF1-202ENST00000533438 ASB2Q96Q27 587 aa13.07□□□□□ -0.32
CLCF1-202ENST00000533438 KATNAL1Q9BW62 490 aa13.07□□□□□ -0.32
CLCF1-202ENST00000533438 REV3LO60673 3130 aa13.06□□□□□ -0.32
CLCF1-202ENST00000533438 CCDC69A6NI79 296 aa13.06□□□□□ -0.32
CLCF1-202ENST00000533438 PLEKHA8P1O95397 391 aa13.06□□□□□ -0.32
CLCF1-202ENST00000533438 GGPS1O95749 300 aa13.06□□□□□ -0.32
CLCF1-202ENST00000533438 UBA1P22314 1058 aaKnown RBP13.06□□□□□ -0.32
CLCF1-202ENST00000533438 PSEN2P49810 448 aa13.06□□□□□ -0.32
CLCF1-202ENST00000533438 CHMP4BP1P59074 171 aa13.06□□□□□ -0.32
CLCF1-202ENST00000533438 MRPS9P82933 396 aaKnown RBP13.06□□□□□ -0.32
CLCF1-202ENST00000533438 RBL2Q08999 1139 aa13.06□□□□□ -0.32
CLCF1-202ENST00000533438 HSDL1Q3SXM5 330 aa13.06□□□□□ -0.32
CLCF1-202ENST00000533438 SRBD1Q8N5C6 995 aaKnown RBP13.06□□□□□ -0.32
CLCF1-202ENST00000533438 CAGE1Q8TC20 777 aa13.06□□□□□ -0.32
CLCF1-202ENST00000533438 PIBF1Q8WXW3 757 aa13.06□□□□□ -0.32
CLCF1-202ENST00000533438 DHX38Q92620 1227 aaKnown RBP13.06□□□□□ -0.32
CLCF1-202ENST00000533438 RRP36Q96EU6 259 aaKnown RBP13.06□□□□□ -0.32
CLCF1-202ENST00000533438 ZFP91Q96JP5 570 aaPredicted RBP13.06□□□□□ -0.32
CLCF1-202ENST00000533438 INPP4AQ96PE3 977 aaPredicted RBP13.06□□□□□ -0.32
CLCF1-202ENST00000533438 LZTS2Q9BRK4 669 aa13.06□□□□□ -0.32
CLCF1-202ENST00000533438 ANO2Q9NQ90 1003 aa13.06□□□□□ -0.32
CLCF1-202ENST00000533438 HDAC6Q9UBN7 1215 aa13.06□□□□□ -0.32
CLCF1-202ENST00000533438 MSRAQ9UJ68 235 aa13.06□□□□□ -0.32
CLCF1-202ENST00000533438 NOD1Q9Y239 953 aa13.06□□□□□ -0.32
CLCF1-202ENST00000533438 YBX2Q9Y2T7 364 aaKnown RBP13.06□□□□□ -0.32
CLCF1-202ENST00000533438 SLC4A7Q9Y6M7 1214 aa13.06□□□□□ -0.32
CLCF1-202ENST00000533438 ZBBXA8MT70 800 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 PIK3CDO00329 1044 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 MEIS2O14770 477 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 PPFIA4O75335 1185 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 STAM2O75886 525 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 ZNF286BP0CG31 522 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 CALM1P0DP23 149 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 CALM2P0DP24 149 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 CALM3P0DP25 149 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 RXRAP19793 462 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 COL9A1P20849 921 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 ICAM3P32942 547 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 GNAQP50148 359 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 MFSD10Q14728 455 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 GPNMBQ14956 572 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 KIAA0753Q2KHM9 967 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 NFXL1Q6ZNB6 911 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 CCDC155Q8N6L0 562 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 RETREG2Q8NC44 543 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 NKX2-4Q9H2Z4 354 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 PCDHA11Q9Y5I1 949 aa13.05□□□□□ -0.32
CLCF1-202ENST00000533438 SORBS3O60504 671 aa13.04□□□□□ -0.32
CLCF1-202ENST00000533438 ACTN1P12814 892 aa13.04□□□□□ -0.32
CLCF1-202ENST00000533438 ATP2A2P16615 1042 aaKnown RBP13.04□□□□□ -0.32
CLCF1-202ENST00000533438 POU3F3P20264 500 aaPredicted RBP13.04□□□□□ -0.32
CLCF1-202ENST00000533438 RABGGTBP53611 331 aa13.04□□□□□ -0.32
CLCF1-202ENST00000533438 MRPS5P82675 430 aaKnown RBP13.04□□□□□ -0.32
CLCF1-202ENST00000533438 SEMA3FQ13275 785 aa13.04□□□□□ -0.32
CLCF1-202ENST00000533438 ADGRE1Q14246 886 aa13.04□□□□□ -0.32
CLCF1-202ENST00000533438 USP17L6PQ6QN14 398 aa13.04□□□□□ -0.32
CLCF1-202ENST00000533438 SGMS1Q86VZ5 419 aa13.04□□□□□ -0.32
CLCF1-202ENST00000533438 CMTR1Q8N1G2 835 aaKnown RBP13.04□□□□□ -0.32
CLCF1-202ENST00000533438 C7orf31Q8N865 590 aa13.04□□□□□ -0.32
CLCF1-202ENST00000533438 AFAP1L1Q8TED9 768 aa13.04□□□□□ -0.32
CLCF1-202ENST00000533438 SPATA33Q96N06 139 aa13.04□□□□□ -0.32
CLCF1-202ENST00000533438 GAS2L1Q99501 681 aaPredicted RBP13.04□□□□□ -0.32
CLCF1-202ENST00000533438 C16orf70Q9BSU1 422 aa13.04□□□□□ -0.32
CLCF1-202ENST00000533438 ALG1Q9BT22 464 aa13.04□□□□□ -0.32
CLCF1-202ENST00000533438 LRRC2Q9BYS8 371 aa13.04□□□□□ -0.32
CLCF1-202ENST00000533438 BCAS3Q9H6U6 928 aa13.04□□□□□ -0.32
CLCF1-202ENST00000533438 SLC28A3Q9HAS3 691 aa13.04□□□□□ -0.32
CLCF1-202ENST00000533438 SEC63Q9UGP8 760 aaKnown RBP13.04□□□□□ -0.32
CLCF1-202ENST00000533438 MYO9BQ13459 2157 aa13.04□□□□□ -0.32
CLCF1-202ENST00000533438 SPATA31C2B4DYI2 1134 aa13.03□□□□□ -0.32
CLCF1-202ENST00000533438 CKBP12277 381 aa13.03□□□□□ -0.32
CLCF1-202ENST00000533438 SELPP16109 830 aa13.03□□□□□ -0.32
CLCF1-202ENST00000533438 PTK7Q13308 1070 aa13.03□□□□□ -0.32
CLCF1-202ENST00000533438 HIC1Q14526 733 aa13.03□□□□□ -0.32
CLCF1-202ENST00000533438 TRIM71Q2Q1W2 868 aaKnown RBP13.03□□□□□ -0.32
CLCF1-202ENST00000533438 TSGA10IPQ3SY00 556 aa13.03□□□□□ -0.32
CLCF1-202ENST00000533438 GNPTABQ3T906 1256 aa13.03□□□□□ -0.32
CLCF1-202ENST00000533438 PCNX4Q63HM2 1172 aa13.03□□□□□ -0.32
CLCF1-202ENST00000533438 TMTC3Q6ZXV5 915 aa13.03□□□□□ -0.32
CLCF1-202ENST00000533438 LRRC8DQ7L1W4 858 aa13.03□□□□□ -0.32
CLCF1-202ENST00000533438 FANCBQ8NB91 859 aa13.03□□□□□ -0.32
CLCF1-202ENST00000533438 SMARCC2Q8TAQ2 1214 aa13.03□□□□□ -0.32
CLCF1-202ENST00000533438 PHOSPHO2Q8TCD6 241 aa13.03□□□□□ -0.32
CLCF1-202ENST00000533438 SLC9A7Q96T83 725 aa13.03□□□□□ -0.32
CLCF1-202ENST00000533438 PRDM12Q9H4Q4 367 aa13.03□□□□□ -0.32
CLCF1-202ENST00000533438 MLXIPQ9HAP2 919 aa13.03□□□□□ -0.32
CLCF1-202ENST00000533438 ARIH1Q9Y4X5 557 aaPredicted RBP13.03□□□□□ -0.32
CLCF1-202ENST00000533438 SLC12A7Q9Y666 1083 aa13.03□□□□□ -0.32
CLCF1-202ENST00000533438 FIBPO43427 364 aa13.02□□□□□ -0.33
CLCF1-202ENST00000533438 BAIAP3O94812 1187 aa13.02□□□□□ -0.33
CLCF1-202ENST00000533438 PARNO95453 639 aaKnown RBP13.02□□□□□ -0.33
CLCF1-202ENST00000533438 CXCL10P02778 98 aa13.02□□□□□ -0.33
CLCF1-202ENST00000533438 LGALS2P05162 132 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms