RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	RMDN3	Q96TC7	470 aa		11.21	□□□□□ -0.61
PPFIA1-223	ENST00000532793	AMN	Q9BXJ7	453 aa		11.21	□□□□□ -0.61
PPFIA1-223	ENST00000532793	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.21	□□□□□ -0.61
PPFIA1-223	ENST00000532793	KIF28P	B7ZC32	967 aa		11.2	□□□□□ -0.62
PPFIA1-223	ENST00000532793	FOXK1	P85037	733 aa		11.2	□□□□□ -0.62
PPFIA1-223	ENST00000532793	SART3	Q15020	963 aa	Known RBP	11.2	□□□□□ -0.62
PPFIA1-223	ENST00000532793	PTGIS	Q16647	500 aa		11.2	□□□□□ -0.62
PPFIA1-223	ENST00000532793	TJAP1	Q5JTD0	557 aa		11.2	□□□□□ -0.62
PPFIA1-223	ENST00000532793	RALYL	Q86SE5	291 aa	Known RBP	11.2	□□□□□ -0.62
PPFIA1-223	ENST00000532793	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.2	□□□□□ -0.62
PPFIA1-223	ENST00000532793	TAAR1	Q96RJ0	339 aa		11.2	□□□□□ -0.62
PPFIA1-223	ENST00000532793	SLC9A7	Q96T83	725 aa		11.2	□□□□□ -0.62
PPFIA1-223	ENST00000532793	KATNAL1	Q9BW62	490 aa		11.2	□□□□□ -0.62
PPFIA1-223	ENST00000532793	PCDHA11	Q9Y5I1	949 aa		11.2	□□□□□ -0.62
PPFIA1-223	ENST00000532793	MRVI1	Q9Y6F6	885 aa		11.2	□□□□□ -0.62
PPFIA1-223	ENST00000532793	DNAH12	Q6ZR08	3092 aa		11.2	□□□□□ -0.62
PPFIA1-223	ENST00000532793	MYO9B	Q13459	2157 aa		11.2	□□□□□ -0.62
PPFIA1-223	ENST00000532793	KLRF2	D3W0D1	207 aa		11.19	□□□□□ -0.62
PPFIA1-223	ENST00000532793	MMP3	P08254	477 aa		11.19	□□□□□ -0.62
PPFIA1-223	ENST00000532793	EIF2AK2	P19525	551 aa	Known RBP	11.19	□□□□□ -0.62
PPFIA1-223	ENST00000532793	KCNJ6	P48051	423 aa		11.19	□□□□□ -0.62
PPFIA1-223	ENST00000532793	RABGGTB	P53611	331 aa		11.19	□□□□□ -0.62
PPFIA1-223	ENST00000532793	DGKD	Q16760	1214 aa		11.19	□□□□□ -0.62
PPFIA1-223	ENST00000532793	LY6K	Q17RY6	165 aa		11.19	□□□□□ -0.62
PPFIA1-223	ENST00000532793	TMEM67	Q5HYA8	995 aa		11.19	□□□□□ -0.62
PPFIA1-223	ENST00000532793	MICALL1	Q8N3F8	863 aa		11.19	□□□□□ -0.62
PPFIA1-223	ENST00000532793	C7orf31	Q8N865	590 aa		11.19	□□□□□ -0.62
PPFIA1-223	ENST00000532793	CAGE1	Q8TC20	777 aa		11.19	□□□□□ -0.62
PPFIA1-223	ENST00000532793	AFG1L	Q8WV93	481 aa		11.19	□□□□□ -0.62
PPFIA1-223	ENST00000532793	JMJD4	Q9H9V9	463 aa		11.19	□□□□□ -0.62
PPFIA1-223	ENST00000532793	MAP3K20	Q9NYL2	800 aa	Known RBP	11.19	□□□□□ -0.62
PPFIA1-223	ENST00000532793	THEG	Q9P2T0	379 aa		11.19	□□□□□ -0.62
PPFIA1-223	ENST00000532793	ZBTB5	O15062	677 aa		11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	GTPBP6	O43824	516 aa	Predicted RBP	11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	EIF3J	O75822	258 aa	Known RBP	11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	ARIH2	O95376	493 aa		11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	PARN	O95453	639 aa	Known RBP	11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	NR3C2	P08235	984 aa		11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	IQCF3	P0C7M6	154 aa		11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	MYCL	P12524	364 aa	Predicted RBP	11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	LAMC2	Q13753	1193 aa		11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	CCDC85B	Q15834	202 aa	Predicted RBP	11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	TTC22	Q5TAA0	569 aa		11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	KCNV1	Q6PIU1	500 aa		11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	HOMER1	Q86YM7	354 aa		11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	DHX37	Q8IY37	1157 aa	Known RBP	11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	SAMD3	Q8N6K7	520 aa		11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	ZNF454	Q8N9F8	522 aa		11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	AFAP1L1	Q8TED9	768 aa		11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	PXMP2	Q9NR77	195 aa		11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	YBX2	Q9Y2T7	364 aa	Known RBP	11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	PCDHA1	Q9Y5I3	950 aa		11.18	□□□□□ -0.62
PPFIA1-223	ENST00000532793	IFIT3	O14879	490 aa	Known RBP	11.17	□□□□□ -0.62
PPFIA1-223	ENST00000532793	BAIAP3	O94812	1187 aa		11.17	□□□□□ -0.62
PPFIA1-223	ENST00000532793	ARHGAP1	Q07960	439 aa		11.17	□□□□□ -0.62
PPFIA1-223	ENST00000532793	WTAP	Q15007	396 aa		11.17	□□□□□ -0.62
PPFIA1-223	ENST00000532793	SKIV2L	Q15477	1246 aa	Known RBP	11.17	□□□□□ -0.62
PPFIA1-223	ENST00000532793	CCDC62	Q6P9F0	684 aa		11.17	□□□□□ -0.62
PPFIA1-223	ENST00000532793	USP38	Q8NB14	1042 aa		11.17	□□□□□ -0.62
PPFIA1-223	ENST00000532793	NCOA7	Q8NI08	942 aa		11.17	□□□□□ -0.62
PPFIA1-223	ENST00000532793	PHOSPHO2	Q8TCD6	241 aa		11.17	□□□□□ -0.62
PPFIA1-223	ENST00000532793	PPP1R13L	Q8WUF5	828 aa		11.17	□□□□□ -0.62
PPFIA1-223	ENST00000532793	TBC1D5	Q92609	795 aa		11.17	□□□□□ -0.62
PPFIA1-223	ENST00000532793	ALG1	Q9BT22	464 aa		11.17	□□□□□ -0.62
PPFIA1-223	ENST00000532793	COL20A1	Q9P218	1284 aa		11.17	□□□□□ -0.62
PPFIA1-223	ENST00000532793	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.16	□□□□□ -0.62
PPFIA1-223	ENST00000532793	CA3	P07451	260 aa		11.16	□□□□□ -0.62
PPFIA1-223	ENST00000532793	POLR2M	P0CAP2	368 aa		11.16	□□□□□ -0.62
PPFIA1-223	ENST00000532793	HSD17B4	P51659	736 aa		11.16	□□□□□ -0.62
PPFIA1-223	ENST00000532793	MRPS5	P82675	430 aa	Known RBP	11.16	□□□□□ -0.62
PPFIA1-223	ENST00000532793	MFSD10	Q14728	455 aa		11.16	□□□□□ -0.62
PPFIA1-223	ENST00000532793	LRRC8D	Q7L1W4	858 aa		11.16	□□□□□ -0.62
PPFIA1-223	ENST00000532793	SESTD1	Q86VW0	696 aa		11.16	□□□□□ -0.62
PPFIA1-223	ENST00000532793	STAG2	Q8N3U4	1231 aa		11.16	□□□□□ -0.62
PPFIA1-223	ENST00000532793	DDX41	Q9UJV9	622 aa	Known RBP	11.16	□□□□□ -0.62
PPFIA1-223	ENST00000532793	COL6A3	P12111	3177 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	KAT6A	Q92794	2004 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	TLL1	O43897	1013 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	MYOG	P15173	224 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	SELP	P16109	830 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	CCND2	P30279	289 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	GRM4	Q14833	912 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	PGM5	Q15124	567 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	SEC23A	Q15436	765 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	KIAA0753	Q2KHM9	967 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	AAK1	Q2M2I8	961 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	GNPTAB	Q3T906	1256 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	ZNF787	Q6DD87	383 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	GDF6	Q6KF10	455 aa	Predicted RBP	11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	CYB5R4	Q7L1T6	521 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	CATIP	Q7Z7H3	387 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	FCHSD1	Q86WN1	690 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	PPTC7	Q8NI37	304 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	CUL5	Q93034	780 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	EMID1	Q96A84	441 aa	Predicted RBP	11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	SPATA33	Q96N06	139 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	PDCD2L	Q9BRP1	358 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	MLXIP	Q9HAP2	919 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	GTF2IRD1	Q9UHL9	959 aa		11.15	□□□□□ -0.62

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