RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 YME1L1Q96TA2 773 aa13.46□□□□□ -0.25
CMTM1-215ENST00000531885 PXMP2Q9NR77 195 aa13.46□□□□□ -0.25
CMTM1-215ENST00000531885 SALL3Q9BXA9 1300 aa13.45□□□□□ -0.26
CMTM1-215ENST00000531885 RSPH10B2B2RC85 870 aa13.45□□□□□ -0.26
CMTM1-215ENST00000531885 PPFIA4O75335 1185 aa13.45□□□□□ -0.26
CMTM1-215ENST00000531885 RSPH10BP0C881 870 aa13.45□□□□□ -0.26
CMTM1-215ENST00000531885 MYCLP12524 364 aaPredicted RBP13.45□□□□□ -0.26
CMTM1-215ENST00000531885 QRICH1Q2TAL8 776 aa13.45□□□□□ -0.26
CMTM1-215ENST00000531885 ZNF589Q86UQ0 364 aaPredicted RBP13.45□□□□□ -0.26
CMTM1-215ENST00000531885 TBC1D10CQ8IV04 446 aa13.45□□□□□ -0.26
CMTM1-215ENST00000531885 FAM178BQ8IXR5 827 aa13.45□□□□□ -0.26
CMTM1-215ENST00000531885 SEPT8Q92599 483 aa13.45□□□□□ -0.26
CMTM1-215ENST00000531885 MRPL38Q96DV4 380 aaKnown RBP13.45□□□□□ -0.26
CMTM1-215ENST00000531885 SPATA33Q96N06 139 aa13.45□□□□□ -0.26
CMTM1-215ENST00000531885 CTAGE1Q96RT6 745 aa13.45□□□□□ -0.26
CMTM1-215ENST00000531885 UBAC1Q9BSL1 405 aa13.45□□□□□ -0.26
CMTM1-215ENST00000531885 AMNQ9BXJ7 453 aa13.45□□□□□ -0.26
CMTM1-215ENST00000531885 CPVLQ9H3G5 476 aa13.45□□□□□ -0.26
CMTM1-215ENST00000531885 VAT1LQ9HCJ6 419 aa13.45□□□□□ -0.26
CMTM1-215ENST00000531885 MAP3K20Q9NYL2 800 aaKnown RBP13.45□□□□□ -0.26
CMTM1-215ENST00000531885 PIEZO1Q92508 2521 aa13.45□□□□□ -0.26
CMTM1-215ENST00000531885 NEDD4P46934 1319 aa13.44□□□□□ -0.26
CMTM1-215ENST00000531885 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.44□□□□□ -0.26
CMTM1-215ENST00000531885 C17orf102A2RUQ5 167 aa13.44□□□□□ -0.26
CMTM1-215ENST00000531885 KDM4AO75164 1064 aa13.44□□□□□ -0.26
CMTM1-215ENST00000531885 TGFB3P10600 412 aa13.44□□□□□ -0.26
CMTM1-215ENST00000531885 GNAT1P11488 350 aa13.44□□□□□ -0.26
CMTM1-215ENST00000531885 GPNMBQ14956 572 aa13.44□□□□□ -0.26
CMTM1-215ENST00000531885 EP400NLQ6ZTU2 488 aa13.44□□□□□ -0.26
CMTM1-215ENST00000531885 TBC1D5Q92609 795 aa13.44□□□□□ -0.26
CMTM1-215ENST00000531885 ZSCAN10Q96SZ4 725 aaPredicted RBP13.44□□□□□ -0.26
CMTM1-215ENST00000531885 C17orf80Q9BSJ5 609 aa13.44□□□□□ -0.26
CMTM1-215ENST00000531885 MLXIPQ9HAP2 919 aa13.44□□□□□ -0.26
CMTM1-215ENST00000531885 COL20A1Q9P218 1284 aa13.44□□□□□ -0.26
CMTM1-215ENST00000531885 MYH7BA7E2Y1 1941 aa13.44□□□□□ -0.26
CMTM1-215ENST00000531885 MUC6Q6W4X9 2439 aa13.44□□□□□ -0.26
CMTM1-215ENST00000531885 HAS3O00219 553 aa13.43□□□□□ -0.26
CMTM1-215ENST00000531885 NOP56O00567 594 aaKnown RBP13.43□□□□□ -0.26
CMTM1-215ENST00000531885 GGPS1O95749 300 aa13.43□□□□□ -0.26
CMTM1-215ENST00000531885 CCND2P30279 289 aa13.43□□□□□ -0.26
CMTM1-215ENST00000531885 IMMTQ16891 758 aaKnown RBP13.43□□□□□ -0.26
CMTM1-215ENST00000531885 GNPTABQ3T906 1256 aa13.43□□□□□ -0.26
CMTM1-215ENST00000531885 CELF3Q5SZQ8 465 aaKnown RBP13.43□□□□□ -0.26
CMTM1-215ENST00000531885 MICAL3Q7RTP6 2002 aa13.43□□□□□ -0.26
CMTM1-215ENST00000531885 SAMD3Q8N6K7 520 aa13.43□□□□□ -0.26
CMTM1-215ENST00000531885 DBF4BQ8NFT6 615 aa13.43□□□□□ -0.26
CMTM1-215ENST00000531885 ATP6V0A1Q93050 837 aa13.43□□□□□ -0.26
CMTM1-215ENST00000531885 KRT23Q9C075 422 aa13.43□□□□□ -0.26
CMTM1-215ENST00000531885 CNNM2Q9H8M5 875 aa13.43□□□□□ -0.26
CMTM1-215ENST00000531885 DIAPH3Q9NSV4 1193 aa13.43□□□□□ -0.26
CMTM1-215ENST00000531885 HIP1O00291 1037 aa13.42□□□□□ -0.26
CMTM1-215ENST00000531885 NCK2O43639 380 aa13.42□□□□□ -0.26
CMTM1-215ENST00000531885 CAND2O75155 1236 aa13.42□□□□□ -0.26
CMTM1-215ENST00000531885 HTRA4P83105 476 aaPredicted RBP13.42□□□□□ -0.26
CMTM1-215ENST00000531885 GPM6BQ13491 265 aa13.42□□□□□ -0.26
CMTM1-215ENST00000531885 TRIM71Q2Q1W2 868 aaKnown RBP13.42□□□□□ -0.26
CMTM1-215ENST00000531885 EPC2Q52LR7 807 aa13.42□□□□□ -0.26
CMTM1-215ENST00000531885 IFIT1BQ5T764 474 aaKnown RBP13.42□□□□□ -0.26
CMTM1-215ENST00000531885 MYSM1Q5VVJ2 828 aa13.42□□□□□ -0.26
CMTM1-215ENST00000531885 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.42□□□□□ -0.26
CMTM1-215ENST00000531885 SERINC5Q86VE9 423 aa13.42□□□□□ -0.26
CMTM1-215ENST00000531885 BANK1Q8NDB2 785 aa13.42□□□□□ -0.26
CMTM1-215ENST00000531885 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.42□□□□□ -0.26
CMTM1-215ENST00000531885 ANKS1AQ92625 1134 aa13.42□□□□□ -0.26
CMTM1-215ENST00000531885 APBB2Q92870 758 aa13.42□□□□□ -0.26
CMTM1-215ENST00000531885 KHSRPQ92945 711 aaKnown RBP eCLIP13.42□□□□□ -0.26
CMTM1-215ENST00000531885 PDCD2LQ9BRP1 358 aa13.42□□□□□ -0.26
CMTM1-215ENST00000531885 JMJD4Q9H9V9 463 aa13.42□□□□□ -0.26
CMTM1-215ENST00000531885 C11orf16Q9NQ32 467 aa13.42□□□□□ -0.26
CMTM1-215ENST00000531885 WDFY4Q6ZS81 3184 aa13.41□□□□□ -0.26
CMTM1-215ENST00000531885 GRXCR2A6NFK2 248 aa13.41□□□□□ -0.26
CMTM1-215ENST00000531885 B4E1Z4 1266 aa13.41□□□□□ -0.26
CMTM1-215ENST00000531885 H3BRB1 525 aa13.41□□□□□ -0.26
CMTM1-215ENST00000531885 DCXO43602 365 aa13.41□□□□□ -0.26
CMTM1-215ENST00000531885 SORBS3O60504 671 aa13.41□□□□□ -0.26
CMTM1-215ENST00000531885 UPP2O95045 317 aa13.41□□□□□ -0.26
CMTM1-215ENST00000531885 HOXD8P13378 290 aaPredicted RBP13.41□□□□□ -0.26
CMTM1-215ENST00000531885 IL9P15248 144 aa13.41□□□□□ -0.26
CMTM1-215ENST00000531885 HSD17B4P51659 736 aa13.41□□□□□ -0.26
CMTM1-215ENST00000531885 ZNF200P98182 395 aaPredicted RBP13.41□□□□□ -0.26
CMTM1-215ENST00000531885 HSDL1Q3SXM5 330 aa13.41□□□□□ -0.26
CMTM1-215ENST00000531885 PLEKHG4Q58EX7 1191 aa13.41□□□□□ -0.26
CMTM1-215ENST00000531885 ENAHQ8N8S7 591 aaPredicted RBP13.41□□□□□ -0.26
CMTM1-215ENST00000531885 PABPC5Q96DU9 382 aaKnown RBP13.41□□□□□ -0.26
CMTM1-215ENST00000531885 UPF3BQ9BZI7 483 aaKnown RBP13.41□□□□□ -0.26
CMTM1-215ENST00000531885 NSUN3Q9H649 340 aaKnown RBP13.41□□□□□ -0.26
CMTM1-215ENST00000531885 TUT1Q9H6E5 874 aaKnown RBP13.41□□□□□ -0.26
CMTM1-215ENST00000531885 PRKAG3Q9UGI9 489 aa13.41□□□□□ -0.26
CMTM1-215ENST00000531885 ZNF215Q9UL58 517 aaPredicted RBP13.41□□□□□ -0.26
CMTM1-215ENST00000531885 RWDD3Q9Y3V2 267 aa13.41□□□□□ -0.26
CMTM1-215ENST00000531885 PCDHA1Q9Y5I3 950 aa13.41□□□□□ -0.26
CMTM1-215ENST00000531885 H3BNC9 293 aa13.4□□□□□ -0.26
CMTM1-215ENST00000531885 H3BQ06 376 aaPredicted RBP13.4□□□□□ -0.26
CMTM1-215ENST00000531885 GCOM1H8Y6P7 765 aaPredicted RBP13.4□□□□□ -0.26
CMTM1-215ENST00000531885 ZBTB5O15062 677 aa13.4□□□□□ -0.26
CMTM1-215ENST00000531885 POLR2MP0CAP2 368 aa13.4□□□□□ -0.26
CMTM1-215ENST00000531885 SDSP20132 328 aa13.4□□□□□ -0.26
CMTM1-215ENST00000531885 NEDD9Q14511 834 aa13.4□□□□□ -0.26
CMTM1-215ENST00000531885 MBTPS1Q14703 1052 aa13.4□□□□□ -0.26
CMTM1-215ENST00000531885 TCTN1Q2MV58 587 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms